RNA–Protein interactions for RNA: ENST00000487462.1

CDK11A-217, Transcript of cyclin dependent kinase 11A, humanhuman

TSL 5

Gene CDK11A, Length 437 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11A-217ENST00000487462 ATP4BP51164 291 aa8.03□□□□□ -1.12
CDK11A-217ENST00000487462 LCN2P80188 198 aa8.03□□□□□ -1.12
CDK11A-217ENST00000487462 TGFBR3Q03167 851 aa8.03□□□□□ -1.12
CDK11A-217ENST00000487462 MVKQ03426 396 aa8.03□□□□□ -1.12
CDK11A-217ENST00000487462 SLC29A2Q14542 456 aa8.03□□□□□ -1.12
CDK11A-217ENST00000487462 C3orf36Q3SXR2 165 aa8.03□□□□□ -1.12
CDK11A-217ENST00000487462 JAZF1Q86VZ6 243 aa8.03□□□□□ -1.12
CDK11A-217ENST00000487462 FAM9CQ8IZT9 166 aa8.03□□□□□ -1.12
CDK11A-217ENST00000487462 L3MBTL4Q8NA19 623 aa8.03□□□□□ -1.12
CDK11A-217ENST00000487462 CEP70Q8NHQ1 597 aa8.03□□□□□ -1.12
CDK11A-217ENST00000487462 LINC01006Q8NI28 216 aa8.03□□□□□ -1.12
CDK11A-217ENST00000487462 PIK3R3Q92569 461 aa8.03□□□□□ -1.12
CDK11A-217ENST00000487462 EXOSC8Q96B26 276 aaKnown RBP8.03□□□□□ -1.12
CDK11A-217ENST00000487462 KTI12Q96EK9 354 aaPredicted RBP8.03□□□□□ -1.12
CDK11A-217ENST00000487462 OR5B2Q96R09 309 aa8.03□□□□□ -1.12
CDK11A-217ENST00000487462 MRPL37Q9BZE1 423 aaKnown RBP8.03□□□□□ -1.12
CDK11A-217ENST00000487462 CAB39LQ9H9S4 337 aa8.03□□□□□ -1.12
CDK11A-217ENST00000487462 OBP2BQ9NPH6 170 aa8.03□□□□□ -1.12
CDK11A-217ENST00000487462 NUDT4Q9NZJ9 180 aa8.03□□□□□ -1.12
CDK11A-217ENST00000487462 SENP1Q9P0U3 644 aa8.03□□□□□ -1.12
CDK11A-217ENST00000487462 C19orf53Q9UNZ5 99 aaPredicted RBP8.03□□□□□ -1.12
CDK11A-217ENST00000487462 ZKSCAN5Q9Y2L8 839 aa8.03□□□□□ -1.12
CDK11A-217ENST00000487462 ACOT9Q9Y305 439 aa8.03□□□□□ -1.12
CDK11A-217ENST00000487462 PPIAL4EA0A075B759 164 aa8.02□□□□□ -1.13
CDK11A-217ENST00000487462 A0A087WV62 115 aa8.02□□□□□ -1.13
CDK11A-217ENST00000487462 PPIAL4CA0A0B4J2A2 164 aa8.02□□□□□ -1.13
CDK11A-217ENST00000487462 IGHV2OR16-5A0A0B4J2B6 119 aa8.02□□□□□ -1.13
CDK11A-217ENST00000487462 CXorf49A8MYA2 514 aaPredicted RBP8.02□□□□□ -1.13
CDK11A-217ENST00000487462 PPIAL4DF5H284 164 aa8.02□□□□□ -1.13
CDK11A-217ENST00000487462 UBXN8O00124 270 aa8.02□□□□□ -1.13
CDK11A-217ENST00000487462 UPK1AO00322 258 aa8.02□□□□□ -1.13
CDK11A-217ENST00000487462 PPP1R3DO95685 299 aa8.02□□□□□ -1.13
CDK11A-217ENST00000487462 KRT14P02533 472 aa8.02□□□□□ -1.13
CDK11A-217ENST00000487462 PPIAL4FP0DN26 164 aa8.02□□□□□ -1.13
CDK11A-217ENST00000487462 CDH2P19022 906 aaPredicted RBP8.02□□□□□ -1.13
CDK11A-217ENST00000487462 TIA1P31483 386 aaKnown RBP eCLIP8.02□□□□□ -1.13
CDK11A-217ENST00000487462 GABRA3P34903 492 aa8.02□□□□□ -1.13
CDK11A-217ENST00000487462 ALDH3B1P43353 468 aa8.02□□□□□ -1.13
CDK11A-217ENST00000487462 ASMTP46597 345 aa8.02□□□□□ -1.13
CDK11A-217ENST00000487462 SLC16A1P53985 500 aa8.02□□□□□ -1.13
CDK11A-217ENST00000487462 SEC24CP53992 1094 aa8.02□□□□□ -1.13
CDK11A-217ENST00000487462 ATP6V0D1P61421 351 aa8.02□□□□□ -1.13
CDK11A-217ENST00000487462 TUBA1BP68363 451 aa8.02□□□□□ -1.13
CDK11A-217ENST00000487462 TUBA4AP68366 448 aa8.02□□□□□ -1.13
CDK11A-217ENST00000487462 TSPO2Q5TGU0 170 aa8.02□□□□□ -1.13
CDK11A-217ENST00000487462 FIP1L1Q6UN15 594 aaKnown RBP8.02□□□□□ -1.13
CDK11A-217ENST00000487462 CBLN3Q6UW01 205 aa8.02□□□□□ -1.13
CDK11A-217ENST00000487462 TMEM107Q6UX40 140 aa8.02□□□□□ -1.13
CDK11A-217ENST00000487462 CASP12Q6UXS9 341 aa8.02□□□□□ -1.13
CDK11A-217ENST00000487462 C9orf139Q6ZV77 190 aa8.02□□□□□ -1.13
CDK11A-217ENST00000487462 TUBA1AQ71U36 451 aa8.02□□□□□ -1.13
CDK11A-217ENST00000487462 MTDHQ86UE4 582 aaKnown RBP8.02□□□□□ -1.13
CDK11A-217ENST00000487462 LSRQ86X29 649 aaPredicted RBP8.02□□□□□ -1.13
CDK11A-217ENST00000487462 ADGRG3Q86Y34 549 aa8.02□□□□□ -1.13
CDK11A-217ENST00000487462 MISPQ8IVT2 679 aa8.02□□□□□ -1.13
CDK11A-217ENST00000487462 OR2L13Q8N349 312 aa8.02□□□□□ -1.13
CDK11A-217ENST00000487462 FAIM2Q9BWQ8 316 aa8.02□□□□□ -1.13
CDK11A-217ENST00000487462 ALG9Q9H6U8 611 aa8.02□□□□□ -1.13
CDK11A-217ENST00000487462 MMP26Q9NRE1 261 aa8.02□□□□□ -1.13
CDK11A-217ENST00000487462 GAR1Q9NY12 217 aaKnown RBP8.02□□□□□ -1.13
CDK11A-217ENST00000487462 AHSPQ9NZD4 102 aa8.02□□□□□ -1.13
CDK11A-217ENST00000487462 UPB1Q9UBR1 384 aa8.02□□□□□ -1.13
CDK11A-217ENST00000487462 DUSP13Q9UII6 198 aa8.02□□□□□ -1.13
CDK11A-217ENST00000487462 DOCK11Q5JSL3 2073 aa8.01□□□□□ -1.13
CDK11A-217ENST00000487462 OR6C65A6NJZ3 312 aa8.01□□□□□ -1.13
CDK11A-217ENST00000487462 SUPT3HB4E1H0 165 aa8.01□□□□□ -1.13
CDK11A-217ENST00000487462 SUPT3HO75486 399 aa8.01□□□□□ -1.13
CDK11A-217ENST00000487462 KCNH1O95259 989 aa8.01□□□□□ -1.13
CDK11A-217ENST00000487462 IGKV3-15P01624 115 aa8.01□□□□□ -1.13
CDK11A-217ENST00000487462 IGHV4-38-2P0DP08 117 aa8.01□□□□□ -1.13
CDK11A-217ENST00000487462 MTNR1AP48039 350 aa8.01□□□□□ -1.13
CDK11A-217ENST00000487462 EVX1P49640 407 aa8.01□□□□□ -1.13
CDK11A-217ENST00000487462 PDCD1Q15116 288 aa8.01□□□□□ -1.13
CDK11A-217ENST00000487462 PRSS53Q2L4Q9 553 aa8.01□□□□□ -1.13
CDK11A-217ENST00000487462 TBRG1Q3YBR2 411 aa8.01□□□□□ -1.13
CDK11A-217ENST00000487462 FRG2Q64ET8 278 aa8.01□□□□□ -1.13
CDK11A-217ENST00000487462 TTC27Q6P3X3 843 aa8.01□□□□□ -1.13
CDK11A-217ENST00000487462 TSPYL5Q86VY4 417 aaPredicted RBP8.01□□□□□ -1.13
CDK11A-217ENST00000487462 CREG2Q8IUH2 290 aa8.01□□□□□ -1.13
CDK11A-217ENST00000487462 GPR119Q8TDV5 335 aa8.01□□□□□ -1.13
CDK11A-217ENST00000487462 SGCDQ92629 289 aa8.01□□□□□ -1.13
CDK11A-217ENST00000487462 UBXN10Q96LJ8 280 aa8.01□□□□□ -1.13
CDK11A-217ENST00000487462 FRG2BQ96QU4 278 aa8.01□□□□□ -1.13
CDK11A-217ENST00000487462 ATOH8Q96SQ7 321 aa8.01□□□□□ -1.13
CDK11A-217ENST00000487462 RBBP8Q99708 897 aa8.01□□□□□ -1.13
CDK11A-217ENST00000487462 MS4A7Q9GZW8 240 aaPredicted RBP8.01□□□□□ -1.13
CDK11A-217ENST00000487462 MS4A5Q9H3V2 200 aa8.01□□□□□ -1.13
CDK11A-217ENST00000487462 SLC35C2Q9NQQ7 365 aa8.01□□□□□ -1.13
CDK11A-217ENST00000487462 LEF1Q9UJU2 399 aaPredicted RBP8.01□□□□□ -1.13
CDK11A-217ENST00000487462 PURGQ9UJV8 347 aaKnown RBP8.01□□□□□ -1.13
CDK11A-217ENST00000487462 AUP1Q9Y679 476 aa8.01□□□□□ -1.13
CDK11A-217ENST00000487462 IGHV3OR16-10A0A075B7F0 116 aa8□□□□□ -1.13
CDK11A-217ENST00000487462 ARPC4-TTLL3A0A0A6YYG9 625 aa8□□□□□ -1.13
CDK11A-217ENST00000487462 A0A1W2PQD3 144 aa8□□□□□ -1.13
CDK11A-217ENST00000487462 VSTM5A8MXK1 200 aa8□□□□□ -1.13
CDK11A-217ENST00000487462 SRRM5B3KS81 715 aa8□□□□□ -1.13
CDK11A-217ENST00000487462 TRIM49D1C9J1S8 452 aa8□□□□□ -1.13
CDK11A-217ENST00000487462 H0YL77 283 aa8□□□□□ -1.13
CDK11A-217ENST00000487462 K7EIL1 84 aa8□□□□□ -1.13
CDK11A-217ENST00000487462 SULT2B1O00204 365 aa8□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms