RNA–Protein interactions for RNA: ENST00000487294.1

R3HDM1-218, Transcript of R3H domain containing 1, humanhuman

TSL 3

Gene R3HDM1, Length 587 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-218ENST00000487294 TUBBP07437 444 aa4.49□□□□□ -1.69
R3HDM1-218ENST00000487294 RPS17P08708 135 aaKnown RBP4.49□□□□□ -1.69
R3HDM1-218ENST00000487294 PABPC4LP0CB38 370 aaKnown RBP4.49□□□□□ -1.69
R3HDM1-218ENST00000487294 SLC25A16P16260 332 aa4.49□□□□□ -1.69
R3HDM1-218ENST00000487294 TYK2P29597 1187 aa4.49□□□□□ -1.69
R3HDM1-218ENST00000487294 STX2P32856 288 aa4.49□□□□□ -1.69
R3HDM1-218ENST00000487294 MPIP34949 423 aa4.49□□□□□ -1.69
R3HDM1-218ENST00000487294 MAGEA12P43365 314 aa4.49□□□□□ -1.69
R3HDM1-218ENST00000487294 CCNG1P51959 295 aa4.49□□□□□ -1.69
R3HDM1-218ENST00000487294 ARFIP2P53365 341 aa4.49□□□□□ -1.69
R3HDM1-218ENST00000487294 PSMD4P55036 377 aaKnown RBP4.49□□□□□ -1.69
R3HDM1-218ENST00000487294 CTBP2P56545 445 aa4.49□□□□□ -1.69
R3HDM1-218ENST00000487294 RNPS1Q15287 305 aaKnown RBP4.49□□□□□ -1.69
R3HDM1-218ENST00000487294 TAB1Q15750 504 aa4.49□□□□□ -1.69
R3HDM1-218ENST00000487294 SGCBQ16585 318 aa4.49□□□□□ -1.69
R3HDM1-218ENST00000487294 DECR1Q16698 335 aa4.49□□□□□ -1.69
R3HDM1-218ENST00000487294 EXOC3L2Q2M3D2 409 aa4.49□□□□□ -1.69
R3HDM1-218ENST00000487294 TECRLQ5HYJ1 363 aa4.49□□□□□ -1.69
R3HDM1-218ENST00000487294 PLAC9Q5JTB6 97 aa4.49□□□□□ -1.69
R3HDM1-218ENST00000487294 C1QTNF12Q5T7M4 302 aa4.49□□□□□ -1.69
R3HDM1-218ENST00000487294 C11orf71Q6IPW1 123 aa4.49□□□□□ -1.69
R3HDM1-218ENST00000487294 KLC3Q6P597 504 aa4.49□□□□□ -1.69
R3HDM1-218ENST00000487294 APOOLQ6UXV4 268 aa4.49□□□□□ -1.69
R3HDM1-218ENST00000487294 TFAP2EQ6VUC0 442 aa4.49□□□□□ -1.69
R3HDM1-218ENST00000487294 MAVSQ7Z434 540 aa4.49□□□□□ -1.69
R3HDM1-218ENST00000487294 TRABD2AQ86V40 505 aa4.49□□□□□ -1.69
R3HDM1-218ENST00000487294 P2RY8Q86VZ1 359 aa4.49□□□□□ -1.69
R3HDM1-218ENST00000487294 SLC44A2Q8IWA5 706 aaPredicted RBP4.49□□□□□ -1.69
R3HDM1-218ENST00000487294 OR2L13Q8N349 312 aa4.49□□□□□ -1.69
R3HDM1-218ENST00000487294 SLC35F6Q8N357 371 aa4.49□□□□□ -1.69
R3HDM1-218ENST00000487294 PTGR2Q8N8N7 351 aaPredicted RBP4.49□□□□□ -1.69
R3HDM1-218ENST00000487294 OR7G2Q8NG99 324 aa4.49□□□□□ -1.69
R3HDM1-218ENST00000487294 OR4F6Q8NGB9 312 aa4.49□□□□□ -1.69
R3HDM1-218ENST00000487294 OR9A2Q8NGT5 310 aa4.49□□□□□ -1.69
R3HDM1-218ENST00000487294 OR10D3Q8NH80 312 aa4.49□□□□□ -1.69
R3HDM1-218ENST00000487294 RNF128Q8TEB7 428 aa4.49□□□□□ -1.69
R3HDM1-218ENST00000487294 KCTD4Q8WVF5 259 aa4.49□□□□□ -1.69
R3HDM1-218ENST00000487294 PROX1Q92786 737 aa4.49□□□□□ -1.69
R3HDM1-218ENST00000487294 S100PBPQ96BU1 408 aa4.49□□□□□ -1.69
R3HDM1-218ENST00000487294 EFHD2Q96C19 240 aaPredicted RBP4.49□□□□□ -1.69
R3HDM1-218ENST00000487294 MTBPQ96DY7 904 aa4.49□□□□□ -1.69
R3HDM1-218ENST00000487294 ERP44Q9BS26 406 aa4.49□□□□□ -1.69
R3HDM1-218ENST00000487294 RHNO1Q9BSD3 238 aa4.49□□□□□ -1.69
R3HDM1-218ENST00000487294 LMF2Q9BU23 707 aaKnown RBP4.49□□□□□ -1.69
R3HDM1-218ENST00000487294 PTDSS2Q9BVG9 487 aa4.49□□□□□ -1.69
R3HDM1-218ENST00000487294 C19orf24Q9BVV8 132 aa4.49□□□□□ -1.69
R3HDM1-218ENST00000487294 BEX2Q9BXY8 128 aa4.49□□□□□ -1.69
R3HDM1-218ENST00000487294 POTEKPQ9BYX7 375 aa4.49□□□□□ -1.69
R3HDM1-218ENST00000487294 ELOVL6Q9H5J4 265 aa4.49□□□□□ -1.69
R3HDM1-218ENST00000487294 ANKRA2Q9H9E1 313 aa4.49□□□□□ -1.69
R3HDM1-218ENST00000487294 GRHL1Q9NZI5 618 aa4.49□□□□□ -1.69
R3HDM1-218ENST00000487294 MED11Q9P086 117 aa4.49□□□□□ -1.69
R3HDM1-218ENST00000487294 VPS29Q9UBQ0 182 aa4.49□□□□□ -1.69
R3HDM1-218ENST00000487294 ZNF225Q9UK10 706 aa4.49□□□□□ -1.69
R3HDM1-218ENST00000487294 MRTO4Q9UKD2 239 aaKnown RBP4.49□□□□□ -1.69
R3HDM1-218ENST00000487294 GRID1Q9ULK0 1009 aa4.49□□□□□ -1.69
R3HDM1-218ENST00000487294 NFU1Q9UMS0 254 aa4.49□□□□□ -1.69
R3HDM1-218ENST00000487294 SNX6Q9UNH7 406 aa4.49□□□□□ -1.69
R3HDM1-218ENST00000487294 SLC12A4Q9UP95 1085 aa4.49□□□□□ -1.69
R3HDM1-218ENST00000487294 SNX24Q9Y343 169 aa4.49□□□□□ -1.69
R3HDM1-218ENST00000487294 OR10H1Q9Y4A9 318 aa4.49□□□□□ -1.69
R3HDM1-218ENST00000487294 IGHV4-30-2A0A087WSY4 118 aa4.48□□□□□ -1.69
R3HDM1-218ENST00000487294 A0A096LPK6 155 aa4.48□□□□□ -1.69
R3HDM1-218ENST00000487294 A0A0J9YW62 118 aa4.48□□□□□ -1.69
R3HDM1-218ENST00000487294 A0A1W2PP18 115 aa4.48□□□□□ -1.69
R3HDM1-218ENST00000487294 A0A1W2PPL8 197 aa4.48□□□□□ -1.69
R3HDM1-218ENST00000487294 DPRXA6NFQ7 191 aa4.48□□□□□ -1.69
R3HDM1-218ENST00000487294 SHISA9B4DS77 424 aa4.48□□□□□ -1.69
R3HDM1-218ENST00000487294 H7C417 338 aa4.48□□□□□ -1.69
R3HDM1-218ENST00000487294 UPK1AO00322 258 aa4.48□□□□□ -1.69
R3HDM1-218ENST00000487294 SCO2O43819 266 aa4.48□□□□□ -1.69
R3HDM1-218ENST00000487294 GPRIN2O60269 458 aa4.48□□□□□ -1.69
R3HDM1-218ENST00000487294 NDUFS7O75251 213 aa4.48□□□□□ -1.69
R3HDM1-218ENST00000487294 NME6O75414 186 aaPredicted RBP4.48□□□□□ -1.69
R3HDM1-218ENST00000487294 PGM3O95394 542 aa4.48□□□□□ -1.69
R3HDM1-218ENST00000487294 ANGPTL1O95841 491 aa4.48□□□□□ -1.69
R3HDM1-218ENST00000487294 PLGP00747 810 aaPredicted RBP4.48□□□□□ -1.69
R3HDM1-218ENST00000487294 PDYNP01213 254 aa4.48□□□□□ -1.69
R3HDM1-218ENST00000487294 RBP1P09455 135 aa4.48□□□□□ -1.69
R3HDM1-218ENST00000487294 LINGO3P0C6S8 592 aa4.48□□□□□ -1.69
R3HDM1-218ENST00000487294 KITP10721 976 aa4.48□□□□□ -1.69
R3HDM1-218ENST00000487294 COX5AP20674 150 aa4.48□□□□□ -1.69
R3HDM1-218ENST00000487294 DRD4P21917 467 aa4.48□□□□□ -1.69
R3HDM1-218ENST00000487294 ELK4P28324 431 aa4.48□□□□□ -1.69
R3HDM1-218ENST00000487294 LCN1P31025 176 aa4.48□□□□□ -1.69
R3HDM1-218ENST00000487294 LIPAP38571 399 aa4.48□□□□□ -1.69
R3HDM1-218ENST00000487294 CDKN1AP38936 164 aa4.48□□□□□ -1.69
R3HDM1-218ENST00000487294 EIF1P41567 113 aaKnown RBP4.48□□□□□ -1.69
R3HDM1-218ENST00000487294 CASP9P55211 416 aa4.48□□□□□ -1.69
R3HDM1-218ENST00000487294 RAE1P78406 368 aaKnown RBP4.48□□□□□ -1.69
R3HDM1-218ENST00000487294 CAV1Q03135 178 aa4.48□□□□□ -1.69
R3HDM1-218ENST00000487294 BSPH1Q075Z2 132 aa4.48□□□□□ -1.69
R3HDM1-218ENST00000487294 CSTF3Q12996 717 aaKnown RBP4.48□□□□□ -1.69
R3HDM1-218ENST00000487294 ITGADQ13349 1161 aa4.48□□□□□ -1.69
R3HDM1-218ENST00000487294 HEPACAMQ14CZ8 416 aa4.48□□□□□ -1.69
R3HDM1-218ENST00000487294 ZNF239Q16600 458 aaKnown RBP4.48□□□□□ -1.69
R3HDM1-218ENST00000487294 PLPPR5Q32ZL2 321 aa4.48□□□□□ -1.69
R3HDM1-218ENST00000487294 FAM153CQ494X1 144 aa4.48□□□□□ -1.69
R3HDM1-218ENST00000487294 SPIN4Q56A73 249 aa4.48□□□□□ -1.69
R3HDM1-218ENST00000487294 TIMM23BQ5SRD1 257 aa4.48□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms