RNA–Protein interactions for RNA: ENST00000484087.5

BRCA1-216, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 1,495 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-216ENST00000484087 ELP5Q8TE02 316 aa6.33□□□□□ -1.4
BRCA1-216ENST00000484087 TM9SF4Q92544 642 aa6.33□□□□□ -1.4
BRCA1-216ENST00000484087 FCGR1BQ92637 280 aa6.33□□□□□ -1.4
BRCA1-216ENST00000484087 RORBQ92753 470 aa6.33□□□□□ -1.4
BRCA1-216ENST00000484087 DIO2Q92813 273 aa6.33□□□□□ -1.4
BRCA1-216ENST00000484087 NACC2Q96BF6 587 aa6.33□□□□□ -1.4
BRCA1-216ENST00000484087 NMD3Q96D46 503 aaKnown RBP6.33□□□□□ -1.4
BRCA1-216ENST00000484087 SENP5Q96HI0 755 aaPredicted RBP6.33□□□□□ -1.4
BRCA1-216ENST00000484087 HS6ST2Q96MM7 605 aa6.33□□□□□ -1.4
BRCA1-216ENST00000484087 SLC38A2Q96QD8 506 aa6.33□□□□□ -1.4
BRCA1-216ENST00000484087 WFDC6Q9BQY6 131 aa6.33□□□□□ -1.4
BRCA1-216ENST00000484087 FUZQ9BT04 418 aa6.33□□□□□ -1.4
BRCA1-216ENST00000484087 COPS4Q9BT78 406 aa6.33□□□□□ -1.4
BRCA1-216ENST00000484087 TRIM2Q9C040 744 aa6.33□□□□□ -1.4
BRCA1-216ENST00000484087 OR8D2Q9GZM6 311 aa6.33□□□□□ -1.4
BRCA1-216ENST00000484087 DUSP21Q9H596 190 aa6.33□□□□□ -1.4
BRCA1-216ENST00000484087 MMP25Q9NPA2 562 aa6.33□□□□□ -1.4
BRCA1-216ENST00000484087 PLCXD1Q9NUJ7 323 aa6.33□□□□□ -1.4
BRCA1-216ENST00000484087 STMN3Q9NZ72 180 aa6.33□□□□□ -1.4
BRCA1-216ENST00000484087 PTTG2Q9NZH5 202 aa6.33□□□□□ -1.4
BRCA1-216ENST00000484087 RPS6KB2Q9UBS0 482 aa6.33□□□□□ -1.4
BRCA1-216ENST00000484087 SH3BGRL2Q9UJC5 107 aa6.33□□□□□ -1.4
BRCA1-216ENST00000484087 TMEM5Q9Y2B1 443 aa6.33□□□□□ -1.4
BRCA1-216ENST00000484087 SLC35A3Q9Y2D2 325 aa6.33□□□□□ -1.4
BRCA1-216ENST00000484087 GPR55Q9Y2T6 319 aaPredicted RBP6.33□□□□□ -1.4
BRCA1-216ENST00000484087 PCDHGB7Q9Y5F8 929 aa6.33□□□□□ -1.4
BRCA1-216ENST00000484087 CEPT1Q9Y6K0 416 aa6.33□□□□□ -1.4
BRCA1-216ENST00000484087 A0A087WUU8 490 aa6.32□□□□□ -1.4
BRCA1-216ENST00000484087 NPIPA5A0A0B4J1W7 369 aa6.32□□□□□ -1.4
BRCA1-216ENST00000484087 C2orf92A0A1B0GVN3 265 aa6.32□□□□□ -1.4
BRCA1-216ENST00000484087 A1L4Q6 167 aa6.32□□□□□ -1.4
BRCA1-216ENST00000484087 EFCAB10A6NFE3 127 aa6.32□□□□□ -1.4
BRCA1-216ENST00000484087 TMEM200CA6NKL6 621 aa6.32□□□□□ -1.4
BRCA1-216ENST00000484087 CLCA1A8K7I4 914 aa6.32□□□□□ -1.4
BRCA1-216ENST00000484087 ZNF99A8MXY4 864 aaPredicted RBP6.32□□□□□ -1.4
BRCA1-216ENST00000484087 NPIPA7E9PJI5 369 aa6.32□□□□□ -1.4
BRCA1-216ENST00000484087 H3BSA7 217 aa6.32□□□□□ -1.4
BRCA1-216ENST00000484087 TRMUO75648 421 aaKnown RBP6.32□□□□□ -1.4
BRCA1-216ENST00000484087 NEURL1O76050 574 aa6.32□□□□□ -1.4
BRCA1-216ENST00000484087 SOX14O95416 240 aa6.32□□□□□ -1.4
BRCA1-216ENST00000484087 DDAH2O95865 285 aa6.32□□□□□ -1.4
BRCA1-216ENST00000484087 NPIPA8P0DM63 369 aa6.32□□□□□ -1.4
BRCA1-216ENST00000484087 ENDOUP21128 410 aaKnown RBP6.32□□□□□ -1.4
BRCA1-216ENST00000484087 DRD5P21918 477 aa6.32□□□□□ -1.4
BRCA1-216ENST00000484087 LCN1P31025 176 aa6.32□□□□□ -1.4
BRCA1-216ENST00000484087 CD96P40200 585 aa6.32□□□□□ -1.4
BRCA1-216ENST00000484087 PPICP45877 212 aa6.32□□□□□ -1.4
BRCA1-216ENST00000484087 GPR143P51810 404 aa6.32□□□□□ -1.4
BRCA1-216ENST00000484087 COPZ1P61923 177 aa6.32□□□□□ -1.4
BRCA1-216ENST00000484087 PMS2P3Q13401 168 aa6.32□□□□□ -1.4
BRCA1-216ENST00000484087 OR1Q1Q15612 314 aa6.32□□□□□ -1.4
BRCA1-216ENST00000484087 OR1C1Q15619 314 aa6.32□□□□□ -1.4
BRCA1-216ENST00000484087 ZNF141Q15928 474 aa6.32□□□□□ -1.4
BRCA1-216ENST00000484087 EXT1Q16394 746 aa6.32□□□□□ -1.4
BRCA1-216ENST00000484087 MAPK14Q16539 360 aa6.32□□□□□ -1.4
BRCA1-216ENST00000484087 CPEB4Q17RY0 729 aaKnown RBP eCLIP6.32□□□□□ -1.4
BRCA1-216ENST00000484087 ZNF766Q5HY98 468 aa6.32□□□□□ -1.4
BRCA1-216ENST00000484087 PDZK1Q5T2W1 519 aa6.32□□□□□ -1.4
BRCA1-216ENST00000484087 MEDAGQ5VYS4 303 aa6.32□□□□□ -1.4
BRCA1-216ENST00000484087 SLX4IPQ5VYV7 408 aa6.32□□□□□ -1.4
BRCA1-216ENST00000484087 SLC27A4Q6P1M0 643 aa6.32□□□□□ -1.4
BRCA1-216ENST00000484087 RASSF6Q6ZTQ3 369 aa6.32□□□□□ -1.4
BRCA1-216ENST00000484087 NCCRP1Q6ZVX7 275 aaPredicted RBP6.32□□□□□ -1.4
BRCA1-216ENST00000484087 AHSA2Q719I0 299 aa6.32□□□□□ -1.4
BRCA1-216ENST00000484087 GALNTL5Q7Z4T8 443 aa6.32□□□□□ -1.4
BRCA1-216ENST00000484087 MDGA2Q7Z553 956 aa6.32□□□□□ -1.4
BRCA1-216ENST00000484087 BCORP1Q8N888 145 aa6.32□□□□□ -1.4
BRCA1-216ENST00000484087 ZNF615Q8N8J6 731 aa6.32□□□□□ -1.4
BRCA1-216ENST00000484087 MORN4Q8NDC4 146 aa6.32□□□□□ -1.4
BRCA1-216ENST00000484087 MDS2Q8NDY4 140 aa6.32□□□□□ -1.4
BRCA1-216ENST00000484087 B3GNT7Q8NFL0 401 aa6.32□□□□□ -1.4
BRCA1-216ENST00000484087 OR8J1Q8NGP2 316 aa6.32□□□□□ -1.4
BRCA1-216ENST00000484087 M1APQ8TC57 530 aa6.32□□□□□ -1.4
BRCA1-216ENST00000484087 SLC2A12Q8TD20 617 aa6.32□□□□□ -1.4
BRCA1-216ENST00000484087 PTPMT1Q8WUK0 201 aaPredicted RBP6.32□□□□□ -1.4
BRCA1-216ENST00000484087 OSTF1Q92882 214 aa6.32□□□□□ -1.4
BRCA1-216ENST00000484087 TMIGD2Q96BF3 282 aa6.32□□□□□ -1.4
BRCA1-216ENST00000484087 PLEKHA8Q96JA3 519 aa6.32□□□□□ -1.4
BRCA1-216ENST00000484087 LCORQ96JN0 433 aaPredicted RBP6.32□□□□□ -1.4
BRCA1-216ENST00000484087 RSPO3Q9BXY4 272 aaPredicted RBP6.32□□□□□ -1.4
BRCA1-216ENST00000484087 ITPAQ9BY32 194 aa6.32□□□□□ -1.4
BRCA1-216ENST00000484087 RBM38Q9H0Z9 239 aaKnown RBP6.32□□□□□ -1.4
BRCA1-216ENST00000484087 MAN2C1Q9NTJ4 1040 aa6.32□□□□□ -1.4
BRCA1-216ENST00000484087 FBXO34Q9NWN3 711 aa6.32□□□□□ -1.4
BRCA1-216ENST00000484087 REV1Q9UBZ9 1251 aa6.32□□□□□ -1.4
BRCA1-216ENST00000484087 WARS2Q9UGM6 360 aaKnown RBP6.32□□□□□ -1.4
BRCA1-216ENST00000484087 SLC7A7Q9UM01 511 aa6.32□□□□□ -1.4
BRCA1-216ENST00000484087 MED31Q9Y3C7 131 aa6.32□□□□□ -1.4
BRCA1-216ENST00000484087 CHST2Q9Y4C5 530 aa6.32□□□□□ -1.4
BRCA1-216ENST00000484087 PCDHGB1Q9Y5G3 927 aa6.32□□□□□ -1.4
BRCA1-216ENST00000484087 SPTAN1Q13813 2472 aaKnown RBP6.31□□□□□ -1.4
BRCA1-216ENST00000484087 IRGMA1A4Y4 181 aa6.31□□□□□ -1.4
BRCA1-216ENST00000484087 PINLYPA6NC86 204 aa6.31□□□□□ -1.4
BRCA1-216ENST00000484087 FRG2CA6NGY1 282 aa6.31□□□□□ -1.4
BRCA1-216ENST00000484087 SERINC4A6NH21 518 aa6.31□□□□□ -1.4
BRCA1-216ENST00000484087 CLDN24A6NM45 220 aa6.31□□□□□ -1.4
BRCA1-216ENST00000484087 OR6C76A6NM76 312 aa6.31□□□□□ -1.4
BRCA1-216ENST00000484087 SCDO00767 359 aa6.31□□□□□ -1.4
BRCA1-216ENST00000484087 WBP4O75554 376 aaKnown RBP6.31□□□□□ -1.4
BRCA1-216ENST00000484087 ITGA10O75578 1167 aa6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms