RNA–Protein interactions for RNA: ENST00000482596.1

CHD6-209, Transcript of chromodomain helicase DNA binding protein 6, humanhuman

TSL 1 (best)

Gene CHD6, Length 599 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6-209ENST00000482596 PLA2G16P53816 162 aa5.43□□□□□ -1.54
CHD6-209ENST00000482596 GNG11P61952 73 aa5.43□□□□□ -1.54
CHD6-209ENST00000482596 ARF1P84077 181 aaKnown RBP5.43□□□□□ -1.54
CHD6-209ENST00000482596 KHDRBS1Q07666 443 aaKnown RBP eCLIP5.43□□□□□ -1.54
CHD6-209ENST00000482596 GABRA6Q16445 453 aa5.43□□□□□ -1.54
CHD6-209ENST00000482596 SLC9B1Q4ZJI4 515 aa5.43□□□□□ -1.54
CHD6-209ENST00000482596 CTSL3PQ5NE16 218 aa5.43□□□□□ -1.54
CHD6-209ENST00000482596 LGSNQ5TDP6 509 aa5.43□□□□□ -1.54
CHD6-209ENST00000482596 MRNIPQ6NTE8 343 aa5.43□□□□□ -1.54
CHD6-209ENST00000482596 CASC4Q6P4E1 433 aa5.43□□□□□ -1.54
CHD6-209ENST00000482596 LRRC6Q86X45 466 aa5.43□□□□□ -1.54
CHD6-209ENST00000482596 PPIL6Q8IXY8 311 aa5.43□□□□□ -1.54
CHD6-209ENST00000482596 KLHDC8AQ8IYD2 350 aa5.43□□□□□ -1.54
CHD6-209ENST00000482596 MPP5Q8N3R9 675 aa5.43□□□□□ -1.54
CHD6-209ENST00000482596 ABHD11Q8NFV4 315 aa5.43□□□□□ -1.54
CHD6-209ENST00000482596 OR2M3Q8NG83 312 aa5.43□□□□□ -1.54
CHD6-209ENST00000482596 OR10S1Q8NGN2 331 aa5.43□□□□□ -1.54
CHD6-209ENST00000482596 SUN5Q8TC36 379 aa5.43□□□□□ -1.54
CHD6-209ENST00000482596 CKAP2Q8WWK9 683 aa5.43□□□□□ -1.54
CHD6-209ENST00000482596 MS4A6EQ96DS6 147 aa5.43□□□□□ -1.54
CHD6-209ENST00000482596 RBM14Q96PK6 669 aaKnown RBP5.43□□□□□ -1.54
CHD6-209ENST00000482596 PANX3Q96QZ0 392 aa5.43□□□□□ -1.54
CHD6-209ENST00000482596 NAPGQ99747 312 aaPredicted RBP5.43□□□□□ -1.54
CHD6-209ENST00000482596 MAPKAP1Q9BPZ7 522 aa5.43□□□□□ -1.54
CHD6-209ENST00000482596 CHID1Q9BWS9 393 aa5.43□□□□□ -1.54
CHD6-209ENST00000482596 PCDHAC1Q9H158 963 aa5.43□□□□□ -1.54
CHD6-209ENST00000482596 MEGF9Q9H1U4 602 aa5.43□□□□□ -1.54
CHD6-209ENST00000482596 P2RY12Q9H244 342 aa5.43□□□□□ -1.54
CHD6-209ENST00000482596 OXSMQ9NWU1 459 aa5.43□□□□□ -1.54
CHD6-209ENST00000482596 ADPRHL2Q9NX46 363 aa5.43□□□□□ -1.54
CHD6-209ENST00000482596 GFOD1Q9NXC2 390 aa5.43□□□□□ -1.54
CHD6-209ENST00000482596 MED11Q9P086 117 aa5.43□□□□□ -1.54
CHD6-209ENST00000482596 MARCH4Q9P2E8 410 aaPredicted RBP5.43□□□□□ -1.54
CHD6-209ENST00000482596 KCNG2Q9UJ96 466 aa5.43□□□□□ -1.54
CHD6-209ENST00000482596 PYCARDQ9ULZ3 195 aa5.43□□□□□ -1.54
CHD6-209ENST00000482596 CAB39Q9Y376 341 aaPredicted RBP5.43□□□□□ -1.54
CHD6-209ENST00000482596 DTNAQ9Y4J8 743 aa5.43□□□□□ -1.54
CHD6-209ENST00000482596 POMT1Q9Y6A1 747 aa5.43□□□□□ -1.54
CHD6-209ENST00000482596 SAR1BQ9Y6B6 198 aa5.43□□□□□ -1.54
CHD6-209ENST00000482596 DNAH2Q9P225 4427 aa5.42□□□□□ -1.54
CHD6-209ENST00000482596 PPIAL4EA0A075B759 164 aa5.42□□□□□ -1.54
CHD6-209ENST00000482596 GIMAP1-GIMAP5A0A087WTJ2 511 aa5.42□□□□□ -1.54
CHD6-209ENST00000482596 PPIAL4CA0A0B4J2A2 164 aa5.42□□□□□ -1.54
CHD6-209ENST00000482596 IGHV1-18A0A0C4DH31 117 aa5.42□□□□□ -1.54
CHD6-209ENST00000482596 TMEM82A0PJX8 343 aa5.42□□□□□ -1.54
CHD6-209ENST00000482596 CTAGE9A4FU28 777 aa5.42□□□□□ -1.54
CHD6-209ENST00000482596 WASHC1A8K0Z3 465 aa5.42□□□□□ -1.54
CHD6-209ENST00000482596 HNRNPCL2B2RXH8 293 aa5.42□□□□□ -1.54
CHD6-209ENST00000482596 PPIAL4DF5H284 164 aa5.42□□□□□ -1.54
CHD6-209ENST00000482596 UBE2CO00762 179 aa5.42□□□□□ -1.54
CHD6-209ENST00000482596 POLR3GO15318 223 aaPredicted RBP5.42□□□□□ -1.54
CHD6-209ENST00000482596 HNRNPCL1O60812 293 aaKnown RBP5.42□□□□□ -1.54
CHD6-209ENST00000482596 NIPSNAP2O75323 286 aa5.42□□□□□ -1.54
CHD6-209ENST00000482596 NDUFS3O75489 264 aa5.42□□□□□ -1.54
CHD6-209ENST00000482596 TSPAN9O75954 239 aa5.42□□□□□ -1.54
CHD6-209ENST00000482596 PAHP00439 452 aa5.42□□□□□ -1.54
CHD6-209ENST00000482596 LHBP01229 141 aa5.42□□□□□ -1.54
CHD6-209ENST00000482596 IFNW1P05000 195 aa5.42□□□□□ -1.54
CHD6-209ENST00000482596 YES1P07947 543 aa5.42□□□□□ -1.54
CHD6-209ENST00000482596 SERPINA6P08185 405 aa5.42□□□□□ -1.54
CHD6-209ENST00000482596 SNRNP70P08621 437 aaKnown RBP5.42□□□□□ -1.54
CHD6-209ENST00000482596 F7P08709 466 aaPredicted RBP5.42□□□□□ -1.54
CHD6-209ENST00000482596 PPIAL4FP0DN26 164 aa5.42□□□□□ -1.54
CHD6-209ENST00000482596 OGNP20774 298 aaKnown RBP5.42□□□□□ -1.54
CHD6-209ENST00000482596 RPS3P23396 243 aaKnown RBP eCLIP5.42□□□□□ -1.54
CHD6-209ENST00000482596 THBS4P35443 961 aa5.42□□□□□ -1.54
CHD6-209ENST00000482596 ETV4P43268 484 aa5.42□□□□□ -1.54
CHD6-209ENST00000482596 HSPA7P48741 367 aa5.42□□□□□ -1.54
CHD6-209ENST00000482596 ALDH9A1P49189 494 aa5.42□□□□□ -1.54
CHD6-209ENST00000482596 NAE1Q13564 534 aa5.42□□□□□ -1.54
CHD6-209ENST00000482596 LAPTM5Q13571 262 aa5.42□□□□□ -1.54
CHD6-209ENST00000482596 DHX34Q14147 1143 aaKnown RBP5.42□□□□□ -1.54
CHD6-209ENST00000482596 CNN3Q15417 329 aaKnown RBP5.42□□□□□ -1.54
CHD6-209ENST00000482596 ZNF239Q16600 458 aaKnown RBP5.42□□□□□ -1.54
CHD6-209ENST00000482596 PFKFB4Q16877 469 aa5.42□□□□□ -1.54
CHD6-209ENST00000482596 KCTD19Q17RG1 926 aaPredicted RBP5.42□□□□□ -1.54
CHD6-209ENST00000482596 ARL13AQ5H913 290 aaPredicted RBP5.42□□□□□ -1.54
CHD6-209ENST00000482596 FRG2Q64ET8 278 aa5.42□□□□□ -1.54
CHD6-209ENST00000482596 GTF2IRD2BQ6EKJ0 949 aa5.42□□□□□ -1.54
CHD6-209ENST00000482596 MTERF4Q7Z6M4 381 aaKnown RBP5.42□□□□□ -1.54
CHD6-209ENST00000482596 GTF2IRD2Q86UP8 949 aa5.42□□□□□ -1.54
CHD6-209ENST00000482596 SBSPONQ8IVN8 264 aa5.42□□□□□ -1.54
CHD6-209ENST00000482596 C1orf174Q8IYL3 243 aa5.42□□□□□ -1.54
CHD6-209ENST00000482596 MIER2Q8N344 545 aa5.42□□□□□ -1.54
CHD6-209ENST00000482596 FADS6Q8N9I5 356 aa5.42□□□□□ -1.54
CHD6-209ENST00000482596 TRPV3Q8NET8 790 aa5.42□□□□□ -1.54
CHD6-209ENST00000482596 OR4F17Q8NGA8 305 aa5.42□□□□□ -1.54
CHD6-209ENST00000482596 RAB8BQ92930 207 aa5.42□□□□□ -1.54
CHD6-209ENST00000482596 PTP4A1Q93096 173 aa5.42□□□□□ -1.54
CHD6-209ENST00000482596 GIMAP5Q96F15 307 aa5.42□□□□□ -1.54
CHD6-209ENST00000482596 SERPINB12Q96P63 405 aa5.42□□□□□ -1.54
CHD6-209ENST00000482596 TMEM237Q96Q45 408 aa5.42□□□□□ -1.54
CHD6-209ENST00000482596 OR4F4Q96R69 305 aa5.42□□□□□ -1.54
CHD6-209ENST00000482596 OR4K3Q96R72 315 aa5.42□□□□□ -1.54
CHD6-209ENST00000482596 MRI1Q9BV20 369 aa5.42□□□□□ -1.54
CHD6-209ENST00000482596 CD244Q9BZW8 370 aa5.42□□□□□ -1.54
CHD6-209ENST00000482596 IQCGQ9H095 443 aaKnown RBP5.42□□□□□ -1.54
CHD6-209ENST00000482596 CXorf36Q9H7Y0 433 aa5.42□□□□□ -1.54
CHD6-209ENST00000482596 NOX4Q9NPH5 578 aa5.42□□□□□ -1.54
CHD6-209ENST00000482596 RNF14Q9UBS8 474 aa5.42□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms