RNA–Protein interactions for RNA: ENST00000480057.1

VTI1A-204, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 598 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-204ENST00000480057 MT-ATP6P00846 226 aa10.03□□□□□ -0.8
VTI1A-204ENST00000480057 TSPAN19P0C672 248 aa10.03□□□□□ -0.8
VTI1A-204ENST00000480057 ADORA3P0DMS8 318 aa10.03□□□□□ -0.8
VTI1A-204ENST00000480057 HK1P19367 917 aa10.03□□□□□ -0.8
VTI1A-204ENST00000480057 TCN2P20062 427 aa10.03□□□□□ -0.8
VTI1A-204ENST00000480057 TGM1P22735 817 aa10.03□□□□□ -0.8
VTI1A-204ENST00000480057 CXCR1P25024 350 aa10.03□□□□□ -0.8
VTI1A-204ENST00000480057 PSMB9P28065 219 aa10.03□□□□□ -0.8
VTI1A-204ENST00000480057 NBL1P41271 181 aa10.03□□□□□ -0.8
VTI1A-204ENST00000480057 MTNR1AP48039 350 aa10.03□□□□□ -0.8
VTI1A-204ENST00000480057 LIMK1P53667 647 aa10.03□□□□□ -0.8
VTI1A-204ENST00000480057 CDH11P55287 796 aa10.03□□□□□ -0.8
VTI1A-204ENST00000480057 FOXK2Q01167 660 aa10.03□□□□□ -0.8
VTI1A-204ENST00000480057 CHAF1BQ13112 559 aa10.03□□□□□ -0.8
VTI1A-204ENST00000480057 QPRTQ15274 297 aa10.03□□□□□ -0.8
VTI1A-204ENST00000480057 COL28A1Q2UY09 1125 aa10.03□□□□□ -0.8
VTI1A-204ENST00000480057 CCDC157Q569K6 752 aa10.03□□□□□ -0.8
VTI1A-204ENST00000480057 SLC25A53Q5H9E4 307 aa10.03□□□□□ -0.8
VTI1A-204ENST00000480057 HES3Q5TGS1 186 aa10.03□□□□□ -0.8
VTI1A-204ENST00000480057 STPG1Q5TH74 334 aa10.03□□□□□ -0.8
VTI1A-204ENST00000480057 DESI1Q6ICB0 168 aa10.03□□□□□ -0.8
VTI1A-204ENST00000480057 CXXC5Q7LFL8 322 aaKnown RBP10.03□□□□□ -0.8
VTI1A-204ENST00000480057 PPP1R32Q7Z5V6 425 aa10.03□□□□□ -0.8
VTI1A-204ENST00000480057 PRSS33Q8NF86 280 aa10.03□□□□□ -0.8
VTI1A-204ENST00000480057 PROKR2Q8NFJ6 384 aa10.03□□□□□ -0.8
VTI1A-204ENST00000480057 DUSP19Q8WTR2 217 aa10.03□□□□□ -0.8
VTI1A-204ENST00000480057 MS4A3Q96HJ5 214 aa10.03□□□□□ -0.8
VTI1A-204ENST00000480057 SH3YL1Q96HL8 342 aaPredicted RBP10.03□□□□□ -0.8
VTI1A-204ENST00000480057 TNFRSF13CQ96RJ3 184 aa10.03□□□□□ -0.8
VTI1A-204ENST00000480057 MYCBPQ99417 103 aaPredicted RBP10.03□□□□□ -0.8
VTI1A-204ENST00000480057 FUNDC2Q9BWH2 189 aa10.03□□□□□ -0.8
VTI1A-204ENST00000480057 LIN28AQ9H9Z2 209 aaKnown RBP10.03□□□□□ -0.8
VTI1A-204ENST00000480057 OSGIN1Q9UJX0 560 aa10.03□□□□□ -0.8
VTI1A-204ENST00000480057 ERGIC3Q9Y282 383 aa10.03□□□□□ -0.8
VTI1A-204ENST00000480057 EXOGQ9Y2C4 368 aaKnown RBP10.03□□□□□ -0.8
VTI1A-204ENST00000480057 EXOSC1Q9Y3B2 195 aaKnown RBP10.03□□□□□ -0.8
VTI1A-204ENST00000480057 HEATR5AQ86XA9 2040 aa10.02□□□□□ -0.8
VTI1A-204ENST00000480057 TRAV36DV7A0A075B6V5 113 aa10.02□□□□□ -0.81
VTI1A-204ENST00000480057 TRAV27A0A087WT01 109 aa10.02□□□□□ -0.81
VTI1A-204ENST00000480057 TNFSF12-TNFSF13A0A0A6YY99 330 aa10.02□□□□□ -0.81
VTI1A-204ENST00000480057 TEX51A0A1B0GUA7 166 aa10.02□□□□□ -0.81
VTI1A-204ENST00000480057 A8MVM7 634 aa10.02□□□□□ -0.81
VTI1A-204ENST00000480057 H3BMQ9 156 aa10.02□□□□□ -0.81
VTI1A-204ENST00000480057 TERTO14746 1132 aaKnown RBP10.02□□□□□ -0.81
VTI1A-204ENST00000480057 NPIPB7O75200 414 aa10.02□□□□□ -0.81
VTI1A-204ENST00000480057 OR2J2O76002 312 aa10.02□□□□□ -0.81
VTI1A-204ENST00000480057 CH25HO95992 272 aa10.02□□□□□ -0.81
VTI1A-204ENST00000480057 LCKP06239 509 aa10.02□□□□□ -0.81
VTI1A-204ENST00000480057 ASAH2BP0C7U1 165 aa10.02□□□□□ -0.81
VTI1A-204ENST00000480057 ZNF3P17036 446 aa10.02□□□□□ -0.81
VTI1A-204ENST00000480057 CCNA2P20248 432 aa10.02□□□□□ -0.81
VTI1A-204ENST00000480057 PAICSP22234 425 aaKnown RBP10.02□□□□□ -0.81
VTI1A-204ENST00000480057 CD82P27701 267 aa10.02□□□□□ -0.81
VTI1A-204ENST00000480057 APOBEC1P41238 236 aaKnown RBP10.02□□□□□ -0.81
VTI1A-204ENST00000480057 EGR4Q05215 589 aa10.02□□□□□ -0.81
VTI1A-204ENST00000480057 KHDRBS1Q07666 443 aaKnown RBP eCLIP10.02□□□□□ -0.81
VTI1A-204ENST00000480057 LSAMPQ13449 338 aa10.02□□□□□ -0.81
VTI1A-204ENST00000480057 DNASE1L3Q13609 305 aa10.02□□□□□ -0.81
VTI1A-204ENST00000480057 C1DQ13901 141 aaKnown RBP10.02□□□□□ -0.81
VTI1A-204ENST00000480057 TIGD6Q17RP2 521 aa10.02□□□□□ -0.81
VTI1A-204ENST00000480057 EMC4Q5J8M3 183 aa10.02□□□□□ -0.81
VTI1A-204ENST00000480057 FAM69BQ5VUD6 431 aa10.02□□□□□ -0.81
VTI1A-204ENST00000480057 DHRS13Q6UX07 377 aa10.02□□□□□ -0.81
VTI1A-204ENST00000480057 THSD4Q6ZMP0 1018 aa10.02□□□□□ -0.81
VTI1A-204ENST00000480057 C16orf47Q6ZP98 133 aaPredicted RBP10.02□□□□□ -0.81
VTI1A-204ENST00000480057 GPALPP1Q8IXQ4 340 aa10.02□□□□□ -0.81
VTI1A-204ENST00000480057 NLGN4YQ8NFZ3 816 aaPredicted RBP10.02□□□□□ -0.81
VTI1A-204ENST00000480057 OR52I1Q8NGK6 324 aa10.02□□□□□ -0.81
VTI1A-204ENST00000480057 OR51A7Q8NH64 312 aa10.02□□□□□ -0.81
VTI1A-204ENST00000480057 THAP3Q8WTV1 239 aaPredicted RBP10.02□□□□□ -0.81
VTI1A-204ENST00000480057 NTNG2Q96CW9 530 aa10.02□□□□□ -0.81
VTI1A-204ENST00000480057 LGALS12Q96DT0 336 aa10.02□□□□□ -0.81
VTI1A-204ENST00000480057 RNFT2Q96EX2 444 aa10.02□□□□□ -0.81
VTI1A-204ENST00000480057 FRMD6Q96NE9 622 aa10.02□□□□□ -0.81
VTI1A-204ENST00000480057 MND1Q9BWT6 205 aa10.02□□□□□ -0.81
VTI1A-204ENST00000480057 ISYNA1Q9NPH2 558 aa10.02□□□□□ -0.81
VTI1A-204ENST00000480057 NRIP3Q9NQ35 241 aa10.02□□□□□ -0.81
VTI1A-204ENST00000480057 HINT3Q9NQE9 182 aaKnown RBP10.02□□□□□ -0.81
VTI1A-204ENST00000480057 NANSQ9NR45 359 aa10.02□□□□□ -0.81
VTI1A-204ENST00000480057 HAO2Q9NYQ3 351 aa10.02□□□□□ -0.81
VTI1A-204ENST00000480057 CHRNA9Q9UGM1 479 aa10.02□□□□□ -0.81
VTI1A-204ENST00000480057 METRNQ9UJH8 293 aa10.02□□□□□ -0.81
VTI1A-204ENST00000480057 WIF1Q9Y5W5 379 aa10.02□□□□□ -0.81
VTI1A-204ENST00000480057 TTC28Q96AY4 2481 aa10.01□□□□□ -0.81
VTI1A-204ENST00000480057 TMED7-TICAM2A0A0A6YYA0 188 aa10.01□□□□□ -0.81
VTI1A-204ENST00000480057 A0A1W2PNU3 283 aaPredicted RBP10.01□□□□□ -0.81
VTI1A-204ENST00000480057 TMEM129A0AVI4 362 aa10.01□□□□□ -0.81
VTI1A-204ENST00000480057 SLC22A31A6NKX4 558 aa10.01□□□□□ -0.81
VTI1A-204ENST00000480057 IQCJ-SCHIP1C9J366 451 aaPredicted RBP10.01□□□□□ -0.81
VTI1A-204ENST00000480057 PRR23D1E9PI22 279 aaPredicted RBP10.01□□□□□ -0.81
VTI1A-204ENST00000480057 M0R082 166 aa10.01□□□□□ -0.81
VTI1A-204ENST00000480057 SLC22A1O15245 554 aa10.01□□□□□ -0.81
VTI1A-204ENST00000480057 ZNF208O43345 1280 aa10.01□□□□□ -0.81
VTI1A-204ENST00000480057 AHCYL1O43865 530 aa10.01□□□□□ -0.81
VTI1A-204ENST00000480057 OR2T1O43869 369 aa10.01□□□□□ -0.81
VTI1A-204ENST00000480057 ITGA10O75578 1167 aa10.01□□□□□ -0.81
VTI1A-204ENST00000480057 SLC25A12O75746 678 aa10.01□□□□□ -0.81
VTI1A-204ENST00000480057 PPP1R3DO95685 299 aa10.01□□□□□ -0.81
VTI1A-204ENST00000480057 NUDT14O95848 222 aa10.01□□□□□ -0.81
VTI1A-204ENST00000480057 TXNDC12O95881 172 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms