RNA–Protein interactions for RNA: ENST00000479596.5

CCNL1-222, Transcript of cyclin L1, human

TSL 3

Gene CCNL1, Length 883 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CCNL1-222	ENST00000479596	FKBP2	P26885	142 aa	Known RBP	13.29	□□□□□ -0.28
CCNL1-222	ENST00000479596	SLC16A1	P53985	500 aa		13.29	□□□□□ -0.28
CCNL1-222	ENST00000479596	CRISP3	P54108	245 aa		13.29	□□□□□ -0.28
CCNL1-222	ENST00000479596	AQP5	P55064	265 aa		13.29	□□□□□ -0.28
CCNL1-222	ENST00000479596	RGN	Q15493	299 aa		13.29	□□□□□ -0.28
CCNL1-222	ENST00000479596	RNF220	Q5VTB9	566 aa		13.29	□□□□□ -0.28
CCNL1-222	ENST00000479596	BLOC1S3	Q6QNY0	202 aa		13.29	□□□□□ -0.28
CCNL1-222	ENST00000479596	BHLHA15	Q7RTS1	189 aa	Predicted RBP	13.29	□□□□□ -0.28
CCNL1-222	ENST00000479596	LRRC75A-AS1	Q8N1F1	130 aa		13.29	□□□□□ -0.28
CCNL1-222	ENST00000479596	C10orf111	Q8N326	155 aa		13.29	□□□□□ -0.28
CCNL1-222	ENST00000479596	CLIP4	Q8N3C7	705 aa		13.29	□□□□□ -0.28
CCNL1-222	ENST00000479596	LILRB1	Q8NHL6	650 aa	Predicted RBP	13.29	□□□□□ -0.28
CCNL1-222	ENST00000479596	CCDC28B	Q9BUN5	200 aa		13.29	□□□□□ -0.28
CCNL1-222	ENST00000479596	POTEKP	Q9BYX7	375 aa		13.29	□□□□□ -0.28
CCNL1-222	ENST00000479596	GSX1	Q9H4S2	264 aa	Predicted RBP	13.29	□□□□□ -0.28
CCNL1-222	ENST00000479596	CALML5	Q9NZT1	146 aa		13.29	□□□□□ -0.28
CCNL1-222	ENST00000479596	TMEM181	Q9P2C4	612 aa		13.29	□□□□□ -0.28
CCNL1-222	ENST00000479596	TRAPPC4	Q9Y296	219 aa		13.29	□□□□□ -0.28
CCNL1-222	ENST00000479596		A0A096LPI6	279 aa		13.28	□□□□□ -0.28
CCNL1-222	ENST00000479596	SMPD2	O60906	423 aa		13.28	□□□□□ -0.28
CCNL1-222	ENST00000479596	THBS1	P07996	1170 aa		13.28	□□□□□ -0.28
CCNL1-222	ENST00000479596	PRG2	P13727	222 aa		13.28	□□□□□ -0.28
CCNL1-222	ENST00000479596	FOSL1	P15407	271 aa		13.28	□□□□□ -0.28
CCNL1-222	ENST00000479596	OR2B6	P58173	313 aa		13.28	□□□□□ -0.28
CCNL1-222	ENST00000479596	STX1B	P61266	288 aa		13.28	□□□□□ -0.28
CCNL1-222	ENST00000479596	PAGE3	Q5JUK9	113 aa		13.28	□□□□□ -0.28
CCNL1-222	ENST00000479596		Q5PR19	223 aa		13.28	□□□□□ -0.28
CCNL1-222	ENST00000479596	NCMAP	Q5T1S8	102 aa		13.28	□□□□□ -0.28
CCNL1-222	ENST00000479596	LRIF1	Q5T3J3	769 aa		13.28	□□□□□ -0.28
CCNL1-222	ENST00000479596	ALKBH2	Q6NS38	261 aa		13.28	□□□□□ -0.28
CCNL1-222	ENST00000479596	PIGX	Q8TBF5	258 aa		13.28	□□□□□ -0.28
CCNL1-222	ENST00000479596	HSD17B8	Q92506	261 aa		13.28	□□□□□ -0.28
CCNL1-222	ENST00000479596	MAL2	Q969L2	176 aa		13.28	□□□□□ -0.28
CCNL1-222	ENST00000479596	A4GALT	Q9NPC4	353 aa		13.28	□□□□□ -0.28
CCNL1-222	ENST00000479596	EMC3	Q9P0I2	261 aa		13.28	□□□□□ -0.28
CCNL1-222	ENST00000479596	TRBV5-3	A0A0A0MS03	114 aa		13.27	□□□□□ -0.29
CCNL1-222	ENST00000479596		A0A0G2JPF8	293 aa		13.27	□□□□□ -0.29
CCNL1-222	ENST00000479596	HNRNPCL2	B2RXH8	293 aa		13.27	□□□□□ -0.29
CCNL1-222	ENST00000479596	HNRNPCL3	B7ZW38	293 aa		13.27	□□□□□ -0.29
CCNL1-222	ENST00000479596	CLIC1	O00299	241 aa		13.27	□□□□□ -0.29
CCNL1-222	ENST00000479596	HS3ST1	O14792	307 aa		13.27	□□□□□ -0.29
CCNL1-222	ENST00000479596	HNRNPCL1	O60812	293 aa	Known RBP	13.27	□□□□□ -0.29
CCNL1-222	ENST00000479596	CNOT4	O95628	575 aa	Known RBP	13.27	□□□□□ -0.29
CCNL1-222	ENST00000479596	IGHV3-9	P01782	118 aa		13.27	□□□□□ -0.29
CCNL1-222	ENST00000479596	HNRNPCL4	P0DMR1	293 aa		13.27	□□□□□ -0.29
CCNL1-222	ENST00000479596	H2AFX	P16104	143 aa	Predicted RBP	13.27	□□□□□ -0.29
CCNL1-222	ENST00000479596	MAP2K6	P52564	334 aa		13.27	□□□□□ -0.29
CCNL1-222	ENST00000479596	FADD	Q13158	208 aa		13.27	□□□□□ -0.29
CCNL1-222	ENST00000479596	SHE	Q5VZ18	495 aa		13.27	□□□□□ -0.29
CCNL1-222	ENST00000479596	SERPINA11	Q86U17	422 aa		13.27	□□□□□ -0.29
CCNL1-222	ENST00000479596	ZNF440	Q8IYI8	595 aa		13.27	□□□□□ -0.29
CCNL1-222	ENST00000479596	ZNF100	Q8IYN0	542 aa		13.27	□□□□□ -0.29
CCNL1-222	ENST00000479596	ZNF433	Q8N7K0	673 aa	Predicted RBP	13.27	□□□□□ -0.29
CCNL1-222	ENST00000479596	DDIT4L	Q96D03	193 aa		13.27	□□□□□ -0.29
CCNL1-222	ENST00000479596	SPDL1	Q96EA4	605 aa		13.27	□□□□□ -0.29
CCNL1-222	ENST00000479596	ZHX1-C8orf76	Q96EF9	292 aa		13.27	□□□□□ -0.29
CCNL1-222	ENST00000479596	BCL2L10	Q9HD36	194 aa		13.27	□□□□□ -0.29
CCNL1-222	ENST00000479596	THUMPD1	Q9NXG2	353 aa	Known RBP	13.27	□□□□□ -0.29
CCNL1-222	ENST00000479596	CCDC167	Q9P0B6	97 aa		13.27	□□□□□ -0.29
CCNL1-222	ENST00000479596	ZAN	Q9Y493	2812 aa		13.27	□□□□□ -0.29
CCNL1-222	ENST00000479596	LIPT2	A6NK58	231 aa		13.26	□□□□□ -0.29
CCNL1-222	ENST00000479596	HMGB1P1	B2RPK0	211 aa	Predicted RBP	13.26	□□□□□ -0.29
CCNL1-222	ENST00000479596	NR5A2	O00482	541 aa		13.26	□□□□□ -0.29
CCNL1-222	ENST00000479596	DSCAM	O60469	2012 aa		13.26	□□□□□ -0.29
CCNL1-222	ENST00000479596	PGM3	O95394	542 aa		13.26	□□□□□ -0.29
CCNL1-222	ENST00000479596	UQCRB	P14927	111 aa		13.26	□□□□□ -0.29
CCNL1-222	ENST00000479596	PAX1	P15863	534 aa		13.26	□□□□□ -0.29
CCNL1-222	ENST00000479596	ADSL	P30566	484 aa	Predicted RBP	13.26	□□□□□ -0.29
CCNL1-222	ENST00000479596	ATP4B	P51164	291 aa		13.26	□□□□□ -0.29
CCNL1-222	ENST00000479596	FOXG1	P55316	489 aa	Predicted RBP	13.26	□□□□□ -0.29
CCNL1-222	ENST00000479596	SLC35A1	P78382	337 aa		13.26	□□□□□ -0.29
CCNL1-222	ENST00000479596	BNIP2	Q12982	314 aa		13.26	□□□□□ -0.29
CCNL1-222	ENST00000479596	PRAMEF8	Q5VWM4	474 aa		13.26	□□□□□ -0.29
CCNL1-222	ENST00000479596	PRAMEF7	Q5VXH5	474 aa		13.26	□□□□□ -0.29
CCNL1-222	ENST00000479596	FBXW9	Q5XUX1	488 aa		13.26	□□□□□ -0.29
CCNL1-222	ENST00000479596	WBP2NL	Q6ICG8	309 aa		13.26	□□□□□ -0.29
CCNL1-222	ENST00000479596	ADAM5	Q6NVV9	412 aa		13.26	□□□□□ -0.29
CCNL1-222	ENST00000479596	COMTD1	Q86VU5	262 aa		13.26	□□□□□ -0.29
CCNL1-222	ENST00000479596	GOLGA6L1	Q8N7Z2	621 aa		13.26	□□□□□ -0.29
CCNL1-222	ENST00000479596	ZNF611	Q8N823	705 aa		13.26	□□□□□ -0.29
CCNL1-222	ENST00000479596	AKAP1	Q92667	903 aa	Known RBP eCLIP	13.26	□□□□□ -0.29
CCNL1-222	ENST00000479596	NEUROG1	Q92886	237 aa		13.26	□□□□□ -0.29
CCNL1-222	ENST00000479596	APH1A	Q96BI3	265 aa		13.26	□□□□□ -0.29
CCNL1-222	ENST00000479596	C3orf49	Q96BT1	292 aa		13.26	□□□□□ -0.29
CCNL1-222	ENST00000479596	PERP	Q96FX8	193 aa		13.26	□□□□□ -0.29
CCNL1-222	ENST00000479596	NSD1	Q96L73	2696 aa	Predicted RBP	13.26	□□□□□ -0.29
CCNL1-222	ENST00000479596	SMR3A	Q99954	134 aa		13.26	□□□□□ -0.29
CCNL1-222	ENST00000479596	SPATA9	Q9BWV2	254 aa		13.26	□□□□□ -0.29
CCNL1-222	ENST00000479596	GSX2	Q9BZM3	304 aa		13.26	□□□□□ -0.29
CCNL1-222	ENST00000479596	IKZF5	Q9H5V7	419 aa		13.26	□□□□□ -0.29
CCNL1-222	ENST00000479596	VIPAS39	Q9H9C1	493 aa		13.26	□□□□□ -0.29
CCNL1-222	ENST00000479596	NPAP1	Q9NZP6	1156 aa		13.26	□□□□□ -0.29
CCNL1-222	ENST00000479596	VAPA	Q9P0L0	249 aa		13.26	□□□□□ -0.29
CCNL1-222	ENST00000479596	MALT1	Q9UDY8	824 aa		13.26	□□□□□ -0.29
CCNL1-222	ENST00000479596	NOSIP	Q9Y314	301 aa	Known RBP	13.26	□□□□□ -0.29
CCNL1-222	ENST00000479596	RNF115	Q9Y4L5	304 aa		13.26	□□□□□ -0.29
CCNL1-222	ENST00000479596	FLVCR1	Q9Y5Y0	555 aa		13.26	□□□□□ -0.29
CCNL1-222	ENST00000479596	GMEB1	Q9Y692	573 aa		13.26	□□□□□ -0.29
CCNL1-222	ENST00000479596	ARID1A	O14497	2285 aa		13.25	□□□□□ -0.29
CCNL1-222	ENST00000479596	DPRX	A6NFQ7	191 aa		13.25	□□□□□ -0.29

Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms