RNA–Protein interactions for RNA: ENST00000478746.1

VIM-204, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 757 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-204ENST00000478746 ZNF786Q8N393 782 aa14.93□□□□□ -0.02
VIM-204ENST00000478746 OR2T11Q8NH01 316 aa14.93□□□□□ -0.02
VIM-204ENST00000478746 PSMA8Q8TAA3 256 aa14.93□□□□□ -0.02
VIM-204ENST00000478746 ACMSDQ8TDX5 336 aa14.93□□□□□ -0.02
VIM-204ENST00000478746 ZNF418Q8TF45 676 aaPredicted RBP14.93□□□□□ -0.02
VIM-204ENST00000478746 SLC38A2Q96QD8 506 aa14.93□□□□□ -0.02
VIM-204ENST00000478746 NAA11Q9BSU3 229 aaPredicted RBP14.93□□□□□ -0.02
VIM-204ENST00000478746 KATNB1Q9BVA0 655 aa14.93□□□□□ -0.02
VIM-204ENST00000478746 OR11A1Q9GZK7 315 aa14.93□□□□□ -0.02
VIM-204ENST00000478746 TMEM181Q9P2C4 612 aa14.93□□□□□ -0.02
VIM-204ENST00000478746 KCNE5Q9UJ90 142 aa14.93□□□□□ -0.02
VIM-204ENST00000478746 TRAPPC4Q9Y296 219 aa14.93□□□□□ -0.02
VIM-204ENST00000478746 TMED5Q9Y3A6 229 aa14.93□□□□□ -0.02
VIM-204ENST00000478746 PKD1L1Q8TDX9 2849 aa14.93□□□□□ -0.02
VIM-204ENST00000478746 TGP01266 2768 aa14.93□□□□□ -0.02
VIM-204ENST00000478746 FCMRO60667 390 aa14.92□□□□□ -0.02
VIM-204ENST00000478746 EIF1BO60739 113 aaKnown RBP14.92□□□□□ -0.02
VIM-204ENST00000478746 LINC00032P0C843 101 aa14.92□□□□□ -0.02
VIM-204ENST00000478746 LAMP1P11279 417 aa14.92□□□□□ -0.02
VIM-204ENST00000478746 NEFHP12036 1026 aa14.92□□□□□ -0.02
VIM-204ENST00000478746 BCKDHAP12694 445 aa14.92□□□□□ -0.02
VIM-204ENST00000478746 IFNGR1P15260 489 aa14.92□□□□□ -0.02
VIM-204ENST00000478746 GCAP28676 217 aa14.92□□□□□ -0.02
VIM-204ENST00000478746 HPCAL1P37235 193 aa14.92□□□□□ -0.02
VIM-204ENST00000478746 LGALS3BPQ08380 585 aa14.92□□□□□ -0.02
VIM-204ENST00000478746 SCGB2A2Q13296 93 aa14.92□□□□□ -0.02
VIM-204ENST00000478746 WHAMMP3Q1A5X7 153 aa14.92□□□□□ -0.02
VIM-204ENST00000478746 LSM12Q3MHD2 195 aaKnown RBP14.92□□□□□ -0.02
VIM-204ENST00000478746 GALNTL6Q49A17 601 aa14.92□□□□□ -0.02
VIM-204ENST00000478746 ADGRG3Q86Y34 549 aa14.92□□□□□ -0.02
VIM-204ENST00000478746 ZCCHC24Q8N2G6 241 aaKnown RBP14.92□□□□□ -0.02
VIM-204ENST00000478746 OR5D16Q8NGK9 328 aa14.92□□□□□ -0.02
VIM-204ENST00000478746 OBP2BQ9NPH6 170 aa14.92□□□□□ -0.02
VIM-204ENST00000478746 MKLN1Q9UL63 735 aa14.92□□□□□ -0.02
VIM-204ENST00000478746 FIS1Q9Y3D6 152 aa14.92□□□□□ -0.02
VIM-204ENST00000478746 VSTM5A8MXK1 200 aa14.91□□□□□ -0.02
VIM-204ENST00000478746 B4DSR2 109 aa14.91□□□□□ -0.02
VIM-204ENST00000478746 FAM157AC9JC47 383 aa14.91□□□□□ -0.02
VIM-204ENST00000478746 SCAMP2O15127 329 aaKnown RBP14.91□□□□□ -0.02
VIM-204ENST00000478746 STX11O75558 287 aa14.91□□□□□ -0.02
VIM-204ENST00000478746 UGT2B17O75795 530 aa14.91□□□□□ -0.02
VIM-204ENST00000478746 C6orf47O95873 294 aa14.91□□□□□ -0.02
VIM-204ENST00000478746 CCNA2P20248 432 aa14.91□□□□□ -0.02
VIM-204ENST00000478746 PAX7P23759 505 aa14.91□□□□□ -0.02
VIM-204ENST00000478746 RYKP34925 604 aa14.91□□□□□ -0.02
VIM-204ENST00000478746 RPL3P39023 403 aaKnown RBP14.91□□□□□ -0.02
VIM-204ENST00000478746 SLC1A3P43003 542 aa14.91□□□□□ -0.02
VIM-204ENST00000478746 DNAJB13P59910 316 aa14.91□□□□□ -0.02
VIM-204ENST00000478746 SLC35A1P78382 337 aa14.91□□□□□ -0.02
VIM-204ENST00000478746 CCNIQ14094 377 aa14.91□□□□□ -0.02
VIM-204ENST00000478746 SLC17A1Q14916 467 aa14.91□□□□□ -0.02
VIM-204ENST00000478746 TRIP10Q15642 601 aa14.91□□□□□ -0.02
VIM-204ENST00000478746 LIPMQ5VYY2 423 aa14.91□□□□□ -0.02
VIM-204ENST00000478746 ANKRD16Q6P6B7 361 aa14.91□□□□□ -0.02
VIM-204ENST00000478746 GRINAQ7Z429 371 aa14.91□□□□□ -0.02
VIM-204ENST00000478746 GLCCI1Q86VQ1 547 aa14.91□□□□□ -0.02
VIM-204ENST00000478746 SFXN5Q8TD22 340 aa14.91□□□□□ -0.02
VIM-204ENST00000478746 UBASH3BQ8TF42 649 aa14.91□□□□□ -0.02
VIM-204ENST00000478746 FAM216AQ8WUB2 273 aa14.91□□□□□ -0.02
VIM-204ENST00000478746 WDR60Q8WVS4 1066 aa14.91□□□□□ -0.02
VIM-204ENST00000478746 MOAP1Q96BY2 351 aa14.91□□□□□ -0.02
VIM-204ENST00000478746 BOD1Q96IK1 185 aa14.91□□□□□ -0.02
VIM-204ENST00000478746 SAP130Q9H0E3 1048 aa14.91□□□□□ -0.02
VIM-204ENST00000478746 TMEM45AQ9NWC5 275 aa14.91□□□□□ -0.02
VIM-204ENST00000478746 EMCNQ9ULC0 261 aa14.91□□□□□ -0.02
VIM-204ENST00000478746 CENPVL1A0A0U1RR11 272 aa14.9□□□□□ -0.02
VIM-204ENST00000478746 DUXAA6NLW8 204 aa14.9□□□□□ -0.02
VIM-204ENST00000478746 hCG_2039718K7EN88 272 aa14.9□□□□□ -0.02
VIM-204ENST00000478746 AZIN1O14977 448 aa14.9□□□□□ -0.02
VIM-204ENST00000478746 LSM1O15116 133 aaKnown RBP14.9□□□□□ -0.02
VIM-204ENST00000478746 CFLARO15519 480 aa14.9□□□□□ -0.02
VIM-204ENST00000478746 SKAP2O75563 359 aaPredicted RBP14.9□□□□□ -0.02
VIM-204ENST00000478746 RGS9O75916 674 aaPredicted RBP14.9□□□□□ -0.02
VIM-204ENST00000478746 AK1P00568 194 aa14.9□□□□□ -0.02
VIM-204ENST00000478746 ABHD2P08910 425 aa14.9□□□□□ -0.02
VIM-204ENST00000478746 CREB1P16220 341 aa14.9□□□□□ -0.02
VIM-204ENST00000478746 MATN1P21941 496 aa14.9□□□□□ -0.02
VIM-204ENST00000478746 ECHS1P30084 290 aa14.9□□□□□ -0.02
VIM-204ENST00000478746 PGM1P36871 562 aa14.9□□□□□ -0.02
VIM-204ENST00000478746 NAAAQ02083 359 aa14.9□□□□□ -0.02
VIM-204ENST00000478746 RIN1Q13671 783 aa14.9□□□□□ -0.02
VIM-204ENST00000478746 AAED1Q7RTV5 226 aa14.9□□□□□ -0.02
VIM-204ENST00000478746 ABHD12BQ7Z5M8 362 aaPredicted RBP14.9□□□□□ -0.02
VIM-204ENST00000478746 PEG10Q86TG7 708 aaKnown RBP14.9□□□□□ -0.02
VIM-204ENST00000478746 NATD1Q8N6N6 113 aa14.9□□□□□ -0.02
VIM-204ENST00000478746 POMGNT2Q8NAT1 580 aa14.9□□□□□ -0.02
VIM-204ENST00000478746 OR4F15Q8NGB8 312 aa14.9□□□□□ -0.02
VIM-204ENST00000478746 OR5AK3PQ8NH89 298 aa14.9□□□□□ -0.02
VIM-204ENST00000478746 DOK1Q99704 481 aa14.9□□□□□ -0.02
VIM-204ENST00000478746 TUBB1Q9H4B7 451 aa14.9□□□□□ -0.02
VIM-204ENST00000478746 ATAD3AQ9NVI7 634 aa14.9□□□□□ -0.02
VIM-204ENST00000478746 PCDHB10Q9UN67 800 aa14.9□□□□□ -0.02
VIM-204ENST00000478746 SH3PXD2BA1X283 911 aa14.89□□□□□ -0.03
VIM-204ENST00000478746 TMEM114B3SHH9 223 aa14.89□□□□□ -0.03
VIM-204ENST00000478746 TRIM77I1YAP6 450 aa14.89□□□□□ -0.03
VIM-204ENST00000478746 KRT33AO76009 404 aa14.89□□□□□ -0.03
VIM-204ENST00000478746 CHEK2O96017 543 aa14.89□□□□□ -0.03
VIM-204ENST00000478746 UBE2NP61088 152 aaKnown RBP14.89□□□□□ -0.03
VIM-204ENST00000478746 RPS26P62854 115 aaKnown RBP14.89□□□□□ -0.03
VIM-204ENST00000478746 ARHGAP11BQ3KRB8 267 aa14.89□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms