RNA–Protein interactions for RNA: ENST00000478573.6

CDC42BPA-212, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-212ENST00000478573 LAMP5Q9UJQ1 280 aa3.14□□□□□ -1.91
CDC42BPA-212ENST00000478573 GINS2Q9Y248 185 aa3.14□□□□□ -1.91
CDC42BPA-212ENST00000478573 AP4B1Q9Y6B7 739 aa3.14□□□□□ -1.91
CDC42BPA-212ENST00000478573 SPTBN5Q9NRC6 3674 aaKnown RBP3.14□□□□□ -1.91
CDC42BPA-212ENST00000478573 C5orf42Q9H799 3197 aa3.14□□□□□ -1.91
CDC42BPA-212ENST00000478573 MYOFQ9NZM1 2061 aa3.13□□□□□ -1.91
CDC42BPA-212ENST00000478573 A0A1B0GUA9 196 aa3.13□□□□□ -1.91
CDC42BPA-212ENST00000478573 LRRIQ4A6NIV6 560 aa3.13□□□□□ -1.91
CDC42BPA-212ENST00000478573 C11orf98E9PRG8 122 aa3.13□□□□□ -1.91
CDC42BPA-212ENST00000478573 SDHDO14521 159 aa3.13□□□□□ -1.91
CDC42BPA-212ENST00000478573 PIGRP01833 764 aa3.13□□□□□ -1.91
CDC42BPA-212ENST00000478573 WNT2P09544 360 aa3.13□□□□□ -1.91
CDC42BPA-212ENST00000478573 DNAH10OSP0CZ25 163 aa3.13□□□□□ -1.91
CDC42BPA-212ENST00000478573 HOXB8P17481 243 aaPredicted RBP3.13□□□□□ -1.91
CDC42BPA-212ENST00000478573 CYLC1P35663 651 aaPredicted RBP3.13□□□□□ -1.91
CDC42BPA-212ENST00000478573 ELK3P41970 407 aa3.13□□□□□ -1.91
CDC42BPA-212ENST00000478573 POU3F4P49335 361 aa3.13□□□□□ -1.91
CDC42BPA-212ENST00000478573 HSD17B7P56937 341 aa3.13□□□□□ -1.91
CDC42BPA-212ENST00000478573 ELP6Q0PNE2 266 aa3.13□□□□□ -1.91
CDC42BPA-212ENST00000478573 OVGP1Q12889 678 aa3.13□□□□□ -1.91
CDC42BPA-212ENST00000478573 TRIP10Q15642 601 aa3.13□□□□□ -1.91
CDC42BPA-212ENST00000478573 ZIC1Q15915 447 aa3.13□□□□□ -1.91
CDC42BPA-212ENST00000478573 MAPK6Q16659 721 aa3.13□□□□□ -1.91
CDC42BPA-212ENST00000478573 MS4A13Q5J8X5 152 aa3.13□□□□□ -1.91
CDC42BPA-212ENST00000478573 NHLRC3Q5JS37 347 aa3.13□□□□□ -1.91
CDC42BPA-212ENST00000478573 PNCKQ6P2M8 343 aa3.13□□□□□ -1.91
CDC42BPA-212ENST00000478573 BTNL3Q6UXE8 466 aa3.13□□□□□ -1.91
CDC42BPA-212ENST00000478573 CENPUQ71F23 418 aa3.13□□□□□ -1.91
CDC42BPA-212ENST00000478573 DAW1Q8N136 415 aa3.13□□□□□ -1.91
CDC42BPA-212ENST00000478573 OR10T2Q8NGX3 314 aa3.13□□□□□ -1.91
CDC42BPA-212ENST00000478573 ART4Q93070 314 aa3.13□□□□□ -1.91
CDC42BPA-212ENST00000478573 DNAJA3Q96EY1 480 aa3.13□□□□□ -1.91
CDC42BPA-212ENST00000478573 C9orf85Q96MD7 179 aa3.13□□□□□ -1.91
CDC42BPA-212ENST00000478573 FOXN4Q96NZ1 517 aa3.13□□□□□ -1.91
CDC42BPA-212ENST00000478573 TPPP3Q9BW30 176 aa3.13□□□□□ -1.91
CDC42BPA-212ENST00000478573 NXF3Q9H4D5 531 aaKnown RBP3.13□□□□□ -1.91
CDC42BPA-212ENST00000478573 ZSCAN16Q9H4T2 348 aaPredicted RBP3.13□□□□□ -1.91
CDC42BPA-212ENST00000478573 GPN2Q9H9Y4 310 aaPredicted RBP3.13□□□□□ -1.91
CDC42BPA-212ENST00000478573 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP3.13□□□□□ -1.91
CDC42BPA-212ENST00000478573 DDX19AQ9NUU7 478 aaKnown RBP3.13□□□□□ -1.91
CDC42BPA-212ENST00000478573 C1orf123Q9NWV4 160 aa3.13□□□□□ -1.91
CDC42BPA-212ENST00000478573 MARCH5Q9NX47 278 aa3.13□□□□□ -1.91
CDC42BPA-212ENST00000478573 CHMP5Q9NZZ3 219 aa3.13□□□□□ -1.91
CDC42BPA-212ENST00000478573 SF3B1O75533 1304 aaKnown RBP eCLIP3.13□□□□□ -1.914e-7■■■■■ 124.4
CDC42BPA-212ENST00000478573 MYO18AQ92614 2054 aaKnown RBP3.12□□□□□ -1.91
CDC42BPA-212ENST00000478573 VPS37CA5D8V6 355 aaPredicted RBP3.12□□□□□ -1.91
CDC42BPA-212ENST00000478573 ARL5CA6NH57 179 aa3.12□□□□□ -1.91
CDC42BPA-212ENST00000478573 ZNF487B1APH4 448 aa3.12□□□□□ -1.91
CDC42BPA-212ENST00000478573 CLDN5O00501 218 aa3.12□□□□□ -1.91
CDC42BPA-212ENST00000478573 GALR3O60755 368 aaPredicted RBP3.12□□□□□ -1.91
CDC42BPA-212ENST00000478573 SH3BGRLO75368 114 aa3.12□□□□□ -1.91
CDC42BPA-212ENST00000478573 YEATS4O95619 227 aa3.12□□□□□ -1.91
CDC42BPA-212ENST00000478573 TPM2P07951 284 aa3.12□□□□□ -1.91
CDC42BPA-212ENST00000478573 GSTT2P0CG29 244 aa3.12□□□□□ -1.91
CDC42BPA-212ENST00000478573 GSTT2BP0CG30 244 aa3.12□□□□□ -1.91
CDC42BPA-212ENST00000478573 MCF2P10911 925 aa3.12□□□□□ -1.91
CDC42BPA-212ENST00000478573 PVRP15151 417 aa3.12□□□□□ -1.91
CDC42BPA-212ENST00000478573 IL9P15248 144 aa3.12□□□□□ -1.91
CDC42BPA-212ENST00000478573 H2AFXP16104 143 aaPredicted RBP3.12□□□□□ -1.91
CDC42BPA-212ENST00000478573 HOXA9P31269 272 aa3.12□□□□□ -1.91
CDC42BPA-212ENST00000478573 SOX6P35712 828 aa3.12□□□□□ -1.91
CDC42BPA-212ENST00000478573 BRCC3P46736 316 aa3.12□□□□□ -1.91
CDC42BPA-212ENST00000478573 SLC11A1P49279 550 aa3.12□□□□□ -1.91
CDC42BPA-212ENST00000478573 EMDP50402 254 aa3.12□□□□□ -1.91
CDC42BPA-212ENST00000478573 METAP1P53582 386 aa3.12□□□□□ -1.91
CDC42BPA-212ENST00000478573 RAB35Q15286 201 aa3.12□□□□□ -1.91
CDC42BPA-212ENST00000478573 KYAT1Q16773 422 aa3.12□□□□□ -1.91
CDC42BPA-212ENST00000478573 XKR4Q5GH76 650 aa3.12□□□□□ -1.91
CDC42BPA-212ENST00000478573 LEMD1Q68G75 181 aa3.12□□□□□ -1.91
CDC42BPA-212ENST00000478573 ATL3Q6DD88 541 aa3.12□□□□□ -1.91
CDC42BPA-212ENST00000478573 ASPHD2Q6ICH7 369 aa3.12□□□□□ -1.91
CDC42BPA-212ENST00000478573 SLC25A24Q6NUK1 477 aa3.12□□□□□ -1.91
CDC42BPA-212ENST00000478573 CCBE1Q6UXH8 406 aaPredicted RBP3.12□□□□□ -1.91
CDC42BPA-212ENST00000478573 SLC25A42Q86VD7 318 aa3.12□□□□□ -1.91
CDC42BPA-212ENST00000478573 HSCBQ8IWL3 235 aa3.12□□□□□ -1.91
CDC42BPA-212ENST00000478573 LINC00612Q8N6U2 182 aa3.12□□□□□ -1.91
CDC42BPA-212ENST00000478573 POM121L12Q8N7R1 296 aa3.12□□□□□ -1.91
CDC42BPA-212ENST00000478573 ZNF540Q8NDQ6 660 aa3.12□□□□□ -1.91
CDC42BPA-212ENST00000478573 ITLN1Q8WWA0 313 aa3.12□□□□□ -1.91
CDC42BPA-212ENST00000478573 TOMM40LQ969M1 308 aa3.12□□□□□ -1.91
CDC42BPA-212ENST00000478573 RAB7BQ96AH8 199 aa3.12□□□□□ -1.91
CDC42BPA-212ENST00000478573 UPRTQ96BW1 309 aa3.12□□□□□ -1.91
CDC42BPA-212ENST00000478573 RAB3CQ96E17 227 aa3.12□□□□□ -1.91
CDC42BPA-212ENST00000478573 HPDLQ96IR7 371 aa3.12□□□□□ -1.91
CDC42BPA-212ENST00000478573 CPB2Q96IY4 423 aa3.12□□□□□ -1.91
CDC42BPA-212ENST00000478573 ELMO2Q96JJ3 720 aa3.12□□□□□ -1.91
CDC42BPA-212ENST00000478573 C1orf147Q96MC9 270 aaPredicted RBP3.12□□□□□ -1.91
CDC42BPA-212ENST00000478573 SOSTQ9BQB4 213 aa3.12□□□□□ -1.91
CDC42BPA-212ENST00000478573 SLC30A2Q9BRI3 323 aa3.12□□□□□ -1.91
CDC42BPA-212ENST00000478573 CCDC94Q9BW85 323 aaPredicted RBP3.12□□□□□ -1.91
CDC42BPA-212ENST00000478573 CALHM2Q9HA72 323 aa3.12□□□□□ -1.91
CDC42BPA-212ENST00000478573 FARSBQ9NSD9 589 aaKnown RBP3.12□□□□□ -1.91
CDC42BPA-212ENST00000478573 SDAD1Q9NVU7 687 aaKnown RBP eCLIP3.12□□□□□ -1.91
CDC42BPA-212ENST00000478573 ZNF581Q9P0T4 197 aa3.12□□□□□ -1.91
CDC42BPA-212ENST00000478573 RCOR3Q9P2K3 495 aaPredicted RBP3.12□□□□□ -1.91
CDC42BPA-212ENST00000478573 CGNQ9P2M7 1197 aaKnown RBP3.12□□□□□ -1.91
CDC42BPA-212ENST00000478573 ADAM28Q9UKQ2 775 aa3.12□□□□□ -1.91
CDC42BPA-212ENST00000478573 STYXL1Q9Y6J8 313 aa3.12□□□□□ -1.91
CDC42BPA-212ENST00000478573 ZDBF2Q9HCK1 2354 aa3.12□□□□□ -1.91
CDC42BPA-212ENST00000478573 DOCK4Q8N1I0 1966 aa3.12□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms