RNA–Protein interactions for RNA: ENST00000477289.1

NSMCE4A-208, Transcript of NSE4 homolog A, SMC5-SMC6 complex component, humanhuman

TSL 2

Gene NSMCE4A, Length 643 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE4A-208ENST00000477289 DDX59Q5T1V6 619 aaKnown RBP eCLIP4.09□□□□□ -1.75
NSMCE4A-208ENST00000477289 LRIF1Q5T3J3 769 aa4.09□□□□□ -1.75
NSMCE4A-208ENST00000477289 PRAMEF20Q5VT98 475 aa4.09□□□□□ -1.75
NSMCE4A-208ENST00000477289 PRAMEF8Q5VWM4 474 aa4.09□□□□□ -1.75
NSMCE4A-208ENST00000477289 PRAMEF7Q5VXH5 474 aa4.09□□□□□ -1.75
NSMCE4A-208ENST00000477289 CGB2Q6NT52 195 aa4.09□□□□□ -1.75
NSMCE4A-208ENST00000477289 C11orf87Q6NUJ2 197 aa4.09□□□□□ -1.75
NSMCE4A-208ENST00000477289 REEP3Q6NUK4 255 aa4.09□□□□□ -1.75
NSMCE4A-208ENST00000477289 TMEM81Q6P7N7 255 aa4.09□□□□□ -1.75
NSMCE4A-208ENST00000477289 AAGABQ6PD74 315 aa4.09□□□□□ -1.75
NSMCE4A-208ENST00000477289 ENPP6Q6UWR7 440 aa4.09□□□□□ -1.75
NSMCE4A-208ENST00000477289 ZNF66Q6ZN08 573 aa4.09□□□□□ -1.75
NSMCE4A-208ENST00000477289 C16orf47Q6ZP98 133 aaPredicted RBP4.09□□□□□ -1.75
NSMCE4A-208ENST00000477289 LRRC74BQ6ZQY2 392 aa4.09□□□□□ -1.75
NSMCE4A-208ENST00000477289 CCDC121Q6ZUS5 278 aa4.09□□□□□ -1.75
NSMCE4A-208ENST00000477289 EIF3MQ7L2H7 374 aaKnown RBP4.09□□□□□ -1.75
NSMCE4A-208ENST00000477289 TRPM8Q7Z2W7 1104 aa4.09□□□□□ -1.75
NSMCE4A-208ENST00000477289 ZNF550Q7Z398 422 aa4.09□□□□□ -1.75
NSMCE4A-208ENST00000477289 WDR53Q7Z5U6 358 aaPredicted RBP4.09□□□□□ -1.75
NSMCE4A-208ENST00000477289 PATL1Q86TB9 770 aaKnown RBP4.09□□□□□ -1.75
NSMCE4A-208ENST00000477289 FUNDC1Q8IVP5 155 aa4.09□□□□□ -1.75
NSMCE4A-208ENST00000477289 ZNF440Q8IYI8 595 aa4.09□□□□□ -1.75
NSMCE4A-208ENST00000477289 GHDCQ8N2G8 530 aa4.09□□□□□ -1.75
NSMCE4A-208ENST00000477289 ZNF619Q8N2I2 560 aa4.09□□□□□ -1.75
NSMCE4A-208ENST00000477289 FAM109AQ8N4B1 249 aa4.09□□□□□ -1.75
NSMCE4A-208ENST00000477289 ZNF441Q8N8Z8 693 aa4.09□□□□□ -1.75
NSMCE4A-208ENST00000477289 EXD3Q8N9H8 876 aa4.09□□□□□ -1.75
NSMCE4A-208ENST00000477289 MDS2Q8NDY4 140 aa4.09□□□□□ -1.75
NSMCE4A-208ENST00000477289 CHDHQ8NE62 594 aaPredicted RBP4.09□□□□□ -1.75
NSMCE4A-208ENST00000477289 CATSPER1Q8NEC5 780 aa4.09□□□□□ -1.75
NSMCE4A-208ENST00000477289 OR10G3Q8NGC4 313 aa4.09□□□□□ -1.75
NSMCE4A-208ENST00000477289 OR5D16Q8NGK9 328 aa4.09□□□□□ -1.75
NSMCE4A-208ENST00000477289 OR14L1PQ8NHC6 308 aa4.09□□□□□ -1.75
NSMCE4A-208ENST00000477289 ZNF563Q8TA94 476 aa4.09□□□□□ -1.75
NSMCE4A-208ENST00000477289 WDR60Q8WVS4 1066 aa4.09□□□□□ -1.75
NSMCE4A-208ENST00000477289 TMEM234Q8WY98 164 aa4.09□□□□□ -1.75
NSMCE4A-208ENST00000477289 PIK3R3Q92569 461 aa4.09□□□□□ -1.75
NSMCE4A-208ENST00000477289 RAB8BQ92930 207 aa4.09□□□□□ -1.75
NSMCE4A-208ENST00000477289 POP5Q969H6 163 aaKnown RBP4.09□□□□□ -1.75
NSMCE4A-208ENST00000477289 MCUR1Q96AQ8 359 aa4.09□□□□□ -1.75
NSMCE4A-208ENST00000477289 LRRC58Q96CX6 371 aa4.09□□□□□ -1.75
NSMCE4A-208ENST00000477289 RCN3Q96D15 328 aa4.09□□□□□ -1.75
NSMCE4A-208ENST00000477289 C16orf58Q96GQ5 468 aa4.09□□□□□ -1.75
NSMCE4A-208ENST00000477289 ANKRD27Q96NW4 1050 aa4.09□□□□□ -1.75
NSMCE4A-208ENST00000477289 TRNT1Q96Q11 434 aaKnown RBP4.09□□□□□ -1.75
NSMCE4A-208ENST00000477289 SDF2Q99470 211 aa4.09□□□□□ -1.75
NSMCE4A-208ENST00000477289 NPAS2Q99743 824 aa4.09□□□□□ -1.75
NSMCE4A-208ENST00000477289 MESP1Q9BRJ9 268 aa4.09□□□□□ -1.75
NSMCE4A-208ENST00000477289 ALG8Q9BVK2 526 aa4.09□□□□□ -1.75
NSMCE4A-208ENST00000477289 ANGPTL4Q9BY76 406 aa4.09□□□□□ -1.75
NSMCE4A-208ENST00000477289 KRTAP2-2Q9BYT5 123 aa4.09□□□□□ -1.75
NSMCE4A-208ENST00000477289 PAIP1Q9H074 479 aaKnown RBP4.09□□□□□ -1.75
NSMCE4A-208ENST00000477289 EVA1AQ9H8M9 152 aa4.09□□□□□ -1.75
NSMCE4A-208ENST00000477289 ANKRA2Q9H9E1 313 aa4.09□□□□□ -1.75
NSMCE4A-208ENST00000477289 SPAG4Q9NPE6 437 aa4.09□□□□□ -1.75
NSMCE4A-208ENST00000477289 SERINC1Q9NRX5 453 aa4.09□□□□□ -1.75
NSMCE4A-208ENST00000477289 SERTAD4Q9NUC0 356 aa4.09□□□□□ -1.75
NSMCE4A-208ENST00000477289 ADPRHL2Q9NX46 363 aa4.09□□□□□ -1.75
NSMCE4A-208ENST00000477289 QPCTLQ9NXS2 382 aa4.09□□□□□ -1.75
NSMCE4A-208ENST00000477289 RPS6KB2Q9UBS0 482 aa4.09□□□□□ -1.75
NSMCE4A-208ENST00000477289 SEC14L3Q9UDX4 400 aa4.09□□□□□ -1.75
NSMCE4A-208ENST00000477289 ZNF223Q9UK11 482 aaPredicted RBP4.09□□□□□ -1.75
NSMCE4A-208ENST00000477289 PRDM4Q9UKN5 801 aa4.09□□□□□ -1.75
NSMCE4A-208ENST00000477289 SLC35A3Q9Y2D2 325 aa4.09□□□□□ -1.75
NSMCE4A-208ENST00000477289 DTNAQ9Y4J8 743 aa4.09□□□□□ -1.75
NSMCE4A-208ENST00000477289 WIF1Q9Y5W5 379 aa4.09□□□□□ -1.75
NSMCE4A-208ENST00000477289 SPIN1Q9Y657 262 aaPredicted RBP4.09□□□□□ -1.75
NSMCE4A-208ENST00000477289 ACACBO00763 2458 aa4.09□□□□□ -1.76
NSMCE4A-208ENST00000477289 GIMAP1-GIMAP5A0A087WTJ2 511 aa4.08□□□□□ -1.76
NSMCE4A-208ENST00000477289 A0A087WZY1 265 aa4.08□□□□□ -1.76
NSMCE4A-208ENST00000477289 TRGV5A0A0B4J1U4 118 aa4.08□□□□□ -1.76
NSMCE4A-208ENST00000477289 A0A1W2PQD3 144 aa4.08□□□□□ -1.76
NSMCE4A-208ENST00000477289 GXYLT2A0PJZ3 443 aa4.08□□□□□ -1.76
NSMCE4A-208ENST00000477289 ELOVL7A1L3X0 281 aa4.08□□□□□ -1.76
NSMCE4A-208ENST00000477289 SERINC4A6NH21 518 aa4.08□□□□□ -1.76
NSMCE4A-208ENST00000477289 GJE1A6NN92 205 aa4.08□□□□□ -1.76
NSMCE4A-208ENST00000477289 ZNF785A8K8V0 405 aa4.08□□□□□ -1.76
NSMCE4A-208ENST00000477289 FAM166BA8MTA8 275 aa4.08□□□□□ -1.76
NSMCE4A-208ENST00000477289 ALG1L2C9J202 215 aa4.08□□□□□ -1.76
NSMCE4A-208ENST00000477289 NPIPA5E9PKD4 350 aa4.08□□□□□ -1.76
NSMCE4A-208ENST00000477289 HMGN4O00479 90 aa4.08□□□□□ -1.76
NSMCE4A-208ENST00000477289 AP3D1O14617 1153 aa4.08□□□□□ -1.76
NSMCE4A-208ENST00000477289 GYG2O15488 501 aa4.08□□□□□ -1.76
NSMCE4A-208ENST00000477289 ZNF264O43296 627 aa4.08□□□□□ -1.76
NSMCE4A-208ENST00000477289 HCRTR2O43614 444 aa4.08□□□□□ -1.76
NSMCE4A-208ENST00000477289 TRIAP1O43715 76 aa4.08□□□□□ -1.76
NSMCE4A-208ENST00000477289 EIF4E2O60573 245 aaKnown RBP4.08□□□□□ -1.76
NSMCE4A-208ENST00000477289 TSPAN2O60636 221 aa4.08□□□□□ -1.76
NSMCE4A-208ENST00000477289 HCN1O60741 890 aa4.08□□□□□ -1.76
NSMCE4A-208ENST00000477289 SCN2BO60939 215 aa4.08□□□□□ -1.76
NSMCE4A-208ENST00000477289 ICOSLGO75144 302 aa4.08□□□□□ -1.76
NSMCE4A-208ENST00000477289 UGT2B11O75310 529 aa4.08□□□□□ -1.76
NSMCE4A-208ENST00000477289 NEURL1O76050 574 aa4.08□□□□□ -1.76
NSMCE4A-208ENST00000477289 PSMG1O95456 288 aa4.08□□□□□ -1.76
NSMCE4A-208ENST00000477289 H6PDO95479 791 aa4.08□□□□□ -1.76
NSMCE4A-208ENST00000477289 NADKO95544 446 aaPredicted RBP4.08□□□□□ -1.76
NSMCE4A-208ENST00000477289 ANGPTL1O95841 491 aa4.08□□□□□ -1.76
NSMCE4A-208ENST00000477289 HNRNPCP07910 306 aaKnown RBP eCLIP4.08□□□□□ -1.76
NSMCE4A-208ENST00000477289 NGFRP08138 427 aa4.08□□□□□ -1.76
NSMCE4A-208ENST00000477289 GUSBP08236 651 aa4.08□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms