RNA–Protein interactions for RNA: ENST00000477085.1

COL4A6-206, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best)

Gene COL4A6, Length 1,784 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-206ENST00000477085 TMEM156Q8N614 296 aa13.11□□□□□ -0.31
COL4A6-206ENST00000477085 FADS6Q8N9I5 356 aa13.11□□□□□ -0.31
COL4A6-206ENST00000477085 OR2M3Q8NG83 312 aa13.11□□□□□ -0.31
COL4A6-206ENST00000477085 OR8J1Q8NGP2 316 aa13.11□□□□□ -0.31
COL4A6-206ENST00000477085 DNAJA3Q96EY1 480 aa13.11□□□□□ -0.31
COL4A6-206ENST00000477085 ANGPTL4Q9BY76 406 aa13.11□□□□□ -0.31
COL4A6-206ENST00000477085 MED17Q9NVC6 651 aa13.11□□□□□ -0.31
COL4A6-206ENST00000477085 FAM186AA6NE01 2351 aa13.11□□□□□ -0.31
COL4A6-206ENST00000477085 TNFSF12-TNFSF13A0A0A6YY99 330 aa13.1□□□□□ -0.31
COL4A6-206ENST00000477085 TMED7-TICAM2A0A0A6YYA0 188 aa13.1□□□□□ -0.31
COL4A6-206ENST00000477085 G3V3Y1 287 aa13.1□□□□□ -0.31
COL4A6-206ENST00000477085 ETV2O00321 342 aaPredicted RBP13.1□□□□□ -0.31
COL4A6-206ENST00000477085 MPZL2O60487 215 aa13.1□□□□□ -0.31
COL4A6-206ENST00000477085 NPIPB7O75200 414 aa13.1□□□□□ -0.31
COL4A6-206ENST00000477085 IGF2P01344 180 aa13.1□□□□□ -0.31
COL4A6-206ENST00000477085 CXCR1P25024 350 aa13.1□□□□□ -0.31
COL4A6-206ENST00000477085 POLR2HP52434 150 aaKnown RBP13.1□□□□□ -0.31
COL4A6-206ENST00000477085 NR1H2P55055 460 aa13.1□□□□□ -0.31
COL4A6-206ENST00000477085 SUMO3P55854 103 aaPredicted RBP13.1□□□□□ -0.31
COL4A6-206ENST00000477085 SNTA1Q13424 505 aa13.1□□□□□ -0.31
COL4A6-206ENST00000477085 SNAPC1Q16533 368 aa13.1□□□□□ -0.31
COL4A6-206ENST00000477085 SLC25A30Q5SVS4 291 aa13.1□□□□□ -0.31
COL4A6-206ENST00000477085 ZNF362Q5T0B9 420 aaPredicted RBP13.1□□□□□ -0.31
COL4A6-206ENST00000477085 BEST3Q8N1M1 668 aa13.1□□□□□ -0.31
COL4A6-206ENST00000477085 ZNF540Q8NDQ6 660 aa13.1□□□□□ -0.31
COL4A6-206ENST00000477085 OR2T33Q8NG76 320 aa13.1□□□□□ -0.31
COL4A6-206ENST00000477085 POC1BQ8TC44 478 aa13.1□□□□□ -0.31
COL4A6-206ENST00000477085 LIPHQ8WWY8 451 aa13.1□□□□□ -0.31
COL4A6-206ENST00000477085 RELTQ969Z4 430 aa13.1□□□□□ -0.31
COL4A6-206ENST00000477085 SECISBP2Q96T21 854 aaKnown RBP13.1□□□□□ -0.31
COL4A6-206ENST00000477085 PTDSS2Q9BVG9 487 aa13.1□□□□□ -0.31
COL4A6-206ENST00000477085 HPF1Q9NWY4 346 aa13.1□□□□□ -0.31
COL4A6-206ENST00000477085 GPR83Q9NYM4 423 aa13.1□□□□□ -0.31
COL4A6-206ENST00000477085 VDAC3Q9Y277 283 aa13.1□□□□□ -0.31
COL4A6-206ENST00000477085 TMED7Q9Y3B3 224 aa13.1□□□□□ -0.31
COL4A6-206ENST00000477085 TPRKBQ9Y3C4 175 aa13.1□□□□□ -0.31
COL4A6-206ENST00000477085 SUSD5O60279 629 aa13.09□□□□□ -0.31
COL4A6-206ENST00000477085 HCN1O60741 890 aa13.09□□□□□ -0.31
COL4A6-206ENST00000477085 RCBTB2O95199 551 aa13.09□□□□□ -0.31
COL4A6-206ENST00000477085 LIPCP11150 499 aa13.09□□□□□ -0.31
COL4A6-206ENST00000477085 IL11P20809 199 aa13.09□□□□□ -0.31
COL4A6-206ENST00000477085 PCMT1P22061 227 aa13.09□□□□□ -0.31
COL4A6-206ENST00000477085 MSX1P28360 303 aa13.09□□□□□ -0.31
COL4A6-206ENST00000477085 SLC15A1P46059 708 aa13.09□□□□□ -0.31
COL4A6-206ENST00000477085 RPS5P46782 204 aaKnown RBP13.09□□□□□ -0.31
COL4A6-206ENST00000477085 RPS4XP62701 263 aaKnown RBP13.09□□□□□ -0.31
COL4A6-206ENST00000477085 OCLNQ16625 522 aa13.09□□□□□ -0.31
COL4A6-206ENST00000477085 PLPPR5Q32ZL2 321 aa13.09□□□□□ -0.31
COL4A6-206ENST00000477085 SYT14P1Q58G82 188 aa13.09□□□□□ -0.31
COL4A6-206ENST00000477085 SLC22A10Q63ZE4 541 aa13.09□□□□□ -0.31
COL4A6-206ENST00000477085 AHSA2Q719I0 299 aa13.09□□□□□ -0.31
COL4A6-206ENST00000477085 LNX2Q8N448 690 aa13.09□□□□□ -0.31
COL4A6-206ENST00000477085 LRR1Q96L50 414 aa13.09□□□□□ -0.31
COL4A6-206ENST00000477085 OR11A1Q9GZK7 315 aa13.09□□□□□ -0.31
COL4A6-206ENST00000477085 SDHAF3Q9NRP4 125 aa13.09□□□□□ -0.31
COL4A6-206ENST00000477085 SCN3BQ9NY72 215 aa13.09□□□□□ -0.31
COL4A6-206ENST00000477085 BLOC1S6Q9UL45 172 aa13.09□□□□□ -0.31
COL4A6-206ENST00000477085 AKAP13Q12802 2813 aa13.09□□□□□ -0.31
COL4A6-206ENST00000477085 A0A0G2JMM0 328 aa13.09□□□□□ -0.31
COL4A6-206ENST00000477085 A0A1W2PPB8 328 aa13.09□□□□□ -0.31
COL4A6-206ENST00000477085 A0A1W2PRS3 328 aa13.09□□□□□ -0.31
COL4A6-206ENST00000477085 DCDC2BA2VCK2 349 aa13.09□□□□□ -0.31
COL4A6-206ENST00000477085 CLCA1A8K7I4 914 aa13.09□□□□□ -0.31
COL4A6-206ENST00000477085 KIR3DP1A8MWS1 328 aa13.09□□□□□ -0.31
COL4A6-206ENST00000477085 DLL1O00548 723 aa13.09□□□□□ -0.31
COL4A6-206ENST00000477085 F10P00742 488 aa13.09□□□□□ -0.31
COL4A6-206ENST00000477085 ASAH2BP0C7U1 165 aa13.09□□□□□ -0.31
COL4A6-206ENST00000477085 C21orf33P30042 268 aaPredicted RBP13.09□□□□□ -0.31
COL4A6-206ENST00000477085 CSNK2BP67870 215 aa13.09□□□□□ -0.31
COL4A6-206ENST00000477085 FOXF1Q12946 379 aa13.09□□□□□ -0.31
COL4A6-206ENST00000477085 PMS2P3Q13401 168 aa13.09□□□□□ -0.31
COL4A6-206ENST00000477085 RTP5Q14D33 572 aa13.09□□□□□ -0.31
COL4A6-206ENST00000477085 SLC35F1Q5T1Q4 408 aa13.09□□□□□ -0.31
COL4A6-206ENST00000477085 IGFN1Q86VF2 1251 aa13.09□□□□□ -0.31
COL4A6-206ENST00000477085 DND1Q8IYX4 353 aaKnown RBP13.09□□□□□ -0.31
COL4A6-206ENST00000477085 MOSPD2Q8NHP6 518 aa13.09□□□□□ -0.31
COL4A6-206ENST00000477085 TMEM163Q8TC26 289 aa13.09□□□□□ -0.31
COL4A6-206ENST00000477085 ST8SIA1Q92185 356 aa13.09□□□□□ -0.31
COL4A6-206ENST00000477085 ZNF582Q96NG8 517 aaPredicted RBP13.09□□□□□ -0.31
COL4A6-206ENST00000477085 CLN6Q9NWW5 311 aa13.09□□□□□ -0.31
COL4A6-206ENST00000477085 STMN3Q9NZ72 180 aa13.09□□□□□ -0.31
COL4A6-206ENST00000477085 CDV3Q9UKY7 258 aaKnown RBP13.09□□□□□ -0.31
COL4A6-206ENST00000477085 ZNF337Q9Y3M9 751 aa13.09□□□□□ -0.31
COL4A6-206ENST00000477085 CPAMD8Q8IZJ3 1885 aa13.08□□□□□ -0.32
COL4A6-206ENST00000477085 SH3D21A4FU49 640 aa13.08□□□□□ -0.32
COL4A6-206ENST00000477085 MCIDASD6RGH6 385 aa13.08□□□□□ -0.32
COL4A6-206ENST00000477085 NKX2-8O15522 239 aa13.08□□□□□ -0.32
COL4A6-206ENST00000477085 PPP1R3DO95685 299 aa13.08□□□□□ -0.32
COL4A6-206ENST00000477085 BGLAPP02818 100 aa13.08□□□□□ -0.32
COL4A6-206ENST00000477085 MT-ND2P03891 347 aa13.08□□□□□ -0.32
COL4A6-206ENST00000477085 BMP7P18075 431 aa13.08□□□□□ -0.32
COL4A6-206ENST00000477085 MAP2K4P45985 399 aa13.08□□□□□ -0.32
COL4A6-206ENST00000477085 MASP1P48740 699 aa13.08□□□□□ -0.32
COL4A6-206ENST00000477085 FOXK2Q01167 660 aa13.08□□□□□ -0.32
COL4A6-206ENST00000477085 EMX1Q04741 257 aaPredicted RBP13.08□□□□□ -0.32
COL4A6-206ENST00000477085 RSPO4Q2I0M5 234 aaPredicted RBP13.08□□□□□ -0.32
COL4A6-206ENST00000477085 SLC25A53Q5H9E4 307 aa13.08□□□□□ -0.32
COL4A6-206ENST00000477085 AADACL4Q5VUY2 407 aa13.08□□□□□ -0.32
COL4A6-206ENST00000477085 JMJD6Q6NYC1 403 aaPredicted RBP13.08□□□□□ -0.32
COL4A6-206ENST00000477085 RTL4Q6ZR62 310 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms