RNA–Protein interactions for RNA: ENST00000475243.5

VAPB-204, Transcript of VAMP associated protein B and C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAPB, Length 7,936 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-204ENST00000475243 NENFQ9UMX5 172 aa10.23□□□□□ -0.77
VAPB-204ENST00000475243 SCN3AQ9NY46 2000 aa10.23□□□□□ -0.77
VAPB-204ENST00000475243 AQP9O43315 295 aa10.23□□□□□ -0.77
VAPB-204ENST00000475243 TIMM8AO60220 97 aaPredicted RBP10.23□□□□□ -0.77
VAPB-204ENST00000475243 PIP5K1CO60331 668 aa10.23□□□□□ -0.77
VAPB-204ENST00000475243 MT-CO2P00403 227 aa10.23□□□□□ -0.77
VAPB-204ENST00000475243 GASTP01350 101 aa10.23□□□□□ -0.77
VAPB-204ENST00000475243 SLC7A9P82251 487 aa10.23□□□□□ -0.77
VAPB-204ENST00000475243 LTBQ06643 244 aa10.23□□□□□ -0.77
VAPB-204ENST00000475243 PRDX1Q06830 199 aaKnown RBP10.23□□□□□ -0.77
VAPB-204ENST00000475243 RAB41Q5JT25 222 aa10.23□□□□□ -0.77
VAPB-204ENST00000475243 OR2G6Q5TZ20 316 aa10.23□□□□□ -0.77
VAPB-204ENST00000475243 FAM111BQ6SJ93 734 aa10.23□□□□□ -0.77
VAPB-204ENST00000475243 APOOLQ6UXV4 268 aa10.23□□□□□ -0.77
VAPB-204ENST00000475243 FCRLAQ7L513 359 aa10.23□□□□□ -0.77
VAPB-204ENST00000475243 ADIPOR2Q86V24 386 aa10.23□□□□□ -0.77
VAPB-204ENST00000475243 ZNF587Q96SQ5 575 aaPredicted RBP10.23□□□□□ -0.77
VAPB-204ENST00000475243 ELF4Q99607 663 aaPredicted RBP10.23□□□□□ -0.77
VAPB-204ENST00000475243 PLCXD1Q9NUJ7 323 aa10.23□□□□□ -0.77
VAPB-204ENST00000475243 RAB27BO00194 218 aa10.23□□□□□ -0.77
VAPB-204ENST00000475243 ZNF593O00488 134 aaPredicted RBP10.23□□□□□ -0.77
VAPB-204ENST00000475243 PTAFRP25105 342 aa10.23□□□□□ -0.77
VAPB-204ENST00000475243 CCL11P51671 97 aa10.23□□□□□ -0.77
VAPB-204ENST00000475243 SPRED3Q2MJR0 410 aa10.23□□□□□ -0.77
VAPB-204ENST00000475243 ZNF691Q5VV52 312 aa10.23□□□□□ -0.77
VAPB-204ENST00000475243 C18orf63Q68DL7 685 aa10.23□□□□□ -0.77
VAPB-204ENST00000475243 TLDC1Q6P9B6 456 aa10.23□□□□□ -0.77
VAPB-204ENST00000475243 SLC16A14Q7RTX9 510 aa10.23□□□□□ -0.77
VAPB-204ENST00000475243 C19orf47Q8N9M1 422 aaKnown RBP10.23□□□□□ -0.77
VAPB-204ENST00000475243 TCTN2Q96GX1 697 aa10.23□□□□□ -0.77
VAPB-204ENST00000475243 STK17BO94768 372 aa10.22□□□□□ -0.77
VAPB-204ENST00000475243 NUDT7P0C024 238 aa10.22□□□□□ -0.77
VAPB-204ENST00000475243 B3GNT8Q7Z7M8 397 aa10.22□□□□□ -0.77
VAPB-204ENST00000475243 SPIN2AQ99865 258 aa10.22□□□□□ -0.77
VAPB-204ENST00000475243 SPIN2BQ9BPZ2 258 aa10.22□□□□□ -0.77
VAPB-204ENST00000475243 KATNB1Q9BVA0 655 aa10.22□□□□□ -0.77
VAPB-204ENST00000475243 TXLNGYQ9BZA5 131 aa10.22□□□□□ -0.77
VAPB-204ENST00000475243 NUBP2Q9Y5Y2 271 aa10.22□□□□□ -0.77
VAPB-204ENST00000475243 IL2RGP31785 369 aa10.22□□□□□ -0.77
VAPB-204ENST00000475243 SLC9A3R2Q15599 337 aa10.22□□□□□ -0.77
VAPB-204ENST00000475243 TMEM244Q5VVB8 128 aa10.22□□□□□ -0.77
VAPB-204ENST00000475243 WDSUB1Q8N9V3 476 aa10.22□□□□□ -0.77
VAPB-204ENST00000475243 SIMC1Q8NDZ2 872 aa10.22□□□□□ -0.77
VAPB-204ENST00000475243 LIN37Q96GY3 246 aaPredicted RBP10.22□□□□□ -0.77
VAPB-204ENST00000475243 GORASP2Q9H8Y8 452 aa10.22□□□□□ -0.77
VAPB-204ENST00000475243 ZNF264O43296 627 aa10.22□□□□□ -0.77
VAPB-204ENST00000475243 VEGFCP49767 419 aa10.22□□□□□ -0.77
VAPB-204ENST00000475243 RPL23AP62750 156 aaKnown RBP10.22□□□□□ -0.77
VAPB-204ENST00000475243 RPP30P78346 268 aaKnown RBP10.22□□□□□ -0.77
VAPB-204ENST00000475243 KCNJ10P78508 379 aa10.22□□□□□ -0.77
VAPB-204ENST00000475243 SMN1Q16637 294 aaKnown RBP10.22□□□□□ -0.77
VAPB-204ENST00000475243 HAS2Q92819 552 aa10.22□□□□□ -0.77
VAPB-204ENST00000475243 ARL11Q969Q4 196 aa10.22□□□□□ -0.77
VAPB-204ENST00000475243 RAB9BQ9NP90 201 aa10.22□□□□□ -0.77
VAPB-204ENST00000475243 GPATCH2Q9NW75 528 aa10.22□□□□□ -0.77
VAPB-204ENST00000475243 ENPP5Q9UJA9 477 aa10.22□□□□□ -0.77
VAPB-204ENST00000475243 HHLA2Q9UM44 414 aa10.22□□□□□ -0.77
VAPB-204ENST00000475243 OR7C1O76099 320 aaPredicted RBP10.22□□□□□ -0.77
VAPB-204ENST00000475243 NXPH3O95157 252 aa10.22□□□□□ -0.77
VAPB-204ENST00000475243 CLDN6P56747 220 aa10.22□□□□□ -0.77
VAPB-204ENST00000475243 CLDN12P56749 244 aa10.22□□□□□ -0.77
VAPB-204ENST00000475243 ZFP90Q8TF47 636 aa10.22□□□□□ -0.77
VAPB-204ENST00000475243 NRG4Q8WWG1 115 aa10.22□□□□□ -0.77
VAPB-204ENST00000475243 WDR83Q9BRX9 315 aaKnown RBP10.22□□□□□ -0.77
VAPB-204ENST00000475243 TMEM184BQ9Y519 407 aaPredicted RBP10.22□□□□□ -0.77
VAPB-204ENST00000475243 MYO5AQ9Y4I1 1855 aaKnown RBP10.22□□□□□ -0.77
VAPB-204ENST00000475243 WASH4PA8MWX3 477 aa10.22□□□□□ -0.77
VAPB-204ENST00000475243 PTGER4P35408 488 aa10.22□□□□□ -0.77
VAPB-204ENST00000475243 SF3B4Q15427 424 aaKnown RBP eCLIP10.22□□□□□ -0.773e-8■■■□□ 15.6
VAPB-204ENST00000475243 FAM43BQ6ZT52 329 aaPredicted RBP10.22□□□□□ -0.77
VAPB-204ENST00000475243 OR5D18Q8NGL1 313 aa10.22□□□□□ -0.77
VAPB-204ENST00000475243 ZC3HAV1LQ96H79 300 aaKnown RBP10.22□□□□□ -0.77
VAPB-204ENST00000475243 SLC22A12Q96S37 553 aa10.22□□□□□ -0.77
VAPB-204ENST00000475243 OR51J1Q9H342 316 aa10.22□□□□□ -0.77
VAPB-204ENST00000475243 TM7SF3Q9NS93 570 aa10.22□□□□□ -0.77
VAPB-204ENST00000475243 KLHL42Q9P2K6 505 aa10.22□□□□□ -0.77
VAPB-204ENST00000475243 SRPX2O60687 465 aaPredicted RBP10.22□□□□□ -0.77
VAPB-204ENST00000475243 EGFP01133 1207 aa10.22□□□□□ -0.77
VAPB-204ENST00000475243 CSF1P09603 554 aa10.22□□□□□ -0.77
VAPB-204ENST00000475243 T-ENOLP0DO92 83 aa10.22□□□□□ -0.77
VAPB-204ENST00000475243 MTCP1P56278 107 aa10.22□□□□□ -0.77
VAPB-204ENST00000475243 EMX1Q04741 257 aaPredicted RBP10.22□□□□□ -0.77
VAPB-204ENST00000475243 ZNF750Q32MQ0 723 aa10.22□□□□□ -0.77
VAPB-204ENST00000475243 DNAJC5GQ8N7S2 189 aa10.22□□□□□ -0.77
VAPB-204ENST00000475243 TMEM163Q8TC26 289 aa10.22□□□□□ -0.77
VAPB-204ENST00000475243 NICN1Q9BSH3 213 aa10.22□□□□□ -0.77
VAPB-204ENST00000475243 ZNF355PQ9NSJ1 428 aa10.22□□□□□ -0.77
VAPB-204ENST00000475243 OR8G3PP0DMU2 310 aa10.21□□□□□ -0.77
VAPB-204ENST00000475243 SSTR2P30874 369 aa10.21□□□□□ -0.77
VAPB-204ENST00000475243 RAB40BQ12829 278 aa10.21□□□□□ -0.77
VAPB-204ENST00000475243 PGGHGQ32M88 737 aa10.21□□□□□ -0.77
VAPB-204ENST00000475243 MPP7Q5T2T1 576 aa10.21□□□□□ -0.77
VAPB-204ENST00000475243 DDX51Q8N8A6 666 aaKnown RBP eCLIP10.21□□□□□ -0.77
VAPB-204ENST00000475243 ZNF566Q969W8 418 aa10.21□□□□□ -0.77
VAPB-204ENST00000475243 ZBTB8AQ96BR9 441 aa10.21□□□□□ -0.77
VAPB-204ENST00000475243 MSI2Q96DH6 328 aaKnown RBP10.21□□□□□ -0.77
VAPB-204ENST00000475243 SORCS2Q96PQ0 1159 aa10.21□□□□□ -0.77
VAPB-204ENST00000475243 VRK1Q99986 396 aaPredicted RBP10.21□□□□□ -0.77
VAPB-204ENST00000475243 HRH4Q9H3N8 390 aa10.21□□□□□ -0.77
VAPB-204ENST00000475243 AGPAT4Q9NRZ5 378 aa10.21□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms