RNA–Protein interactions for RNA: ENST00000473345.5

MCF2L-223, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 399 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-223ENST00000473345 APOBEC3AP31941 199 aaPredicted RBP8.37□□□□□ -1.07
MCF2L-223ENST00000473345 ETV4P43268 484 aa8.37□□□□□ -1.07
MCF2L-223ENST00000473345 PDLIM4P50479 330 aa8.37□□□□□ -1.07
MCF2L-223ENST00000473345 DNAJB13P59910 316 aa8.37□□□□□ -1.07
MCF2L-223ENST00000473345 TUBA1BP68363 451 aa8.37□□□□□ -1.07
MCF2L-223ENST00000473345 TUBA4AP68366 448 aa8.37□□□□□ -1.07
MCF2L-223ENST00000473345 HBA1P69905 142 aa8.37□□□□□ -1.07
MCF2L-223ENST00000473345 PHC1P78364 1004 aa8.37□□□□□ -1.07
MCF2L-223ENST00000473345 PCLAFQ15004 111 aa8.37□□□□□ -1.07
MCF2L-223ENST00000473345 GPR68Q15743 365 aa8.37□□□□□ -1.07
MCF2L-223ENST00000473345 KANK2Q63ZY3 851 aa8.37□□□□□ -1.07
MCF2L-223ENST00000473345 TUBA1AQ71U36 451 aa8.37□□□□□ -1.07
MCF2L-223ENST00000473345 CARM1Q86X55 608 aa8.37□□□□□ -1.07
MCF2L-223ENST00000473345 CLECL1Q8IZS7 167 aa8.37□□□□□ -1.07
MCF2L-223ENST00000473345 ZFP28Q8NHY6 868 aa8.37□□□□□ -1.07
MCF2L-223ENST00000473345 APOPT1Q96IL0 206 aa8.37□□□□□ -1.07
MCF2L-223ENST00000473345 METTL2AQ96IZ6 378 aaKnown RBP8.37□□□□□ -1.07
MCF2L-223ENST00000473345 ZNF385AQ96PM9 386 aaKnown RBP8.37□□□□□ -1.07
MCF2L-223ENST00000473345 C1orf50Q9BV19 199 aa8.37□□□□□ -1.07
MCF2L-223ENST00000473345 NELFAQ9H3P2 528 aa8.37□□□□□ -1.07
MCF2L-223ENST00000473345 OXSMQ9NWU1 459 aa8.37□□□□□ -1.07
MCF2L-223ENST00000473345 MKLN1Q9UL63 735 aa8.37□□□□□ -1.07
MCF2L-223ENST00000473345 FLVCR1Q9Y5Y0 555 aa8.37□□□□□ -1.07
MCF2L-223ENST00000473345 TMEM129A0AVI4 362 aa8.36□□□□□ -1.07
MCF2L-223ENST00000473345 TMEM72A0PK05 275 aa8.36□□□□□ -1.07
MCF2L-223ENST00000473345 ZNF503-AS2A6NEH8 195 aa8.36□□□□□ -1.07
MCF2L-223ENST00000473345 SLC28A1O00337 649 aa8.36□□□□□ -1.07
MCF2L-223ENST00000473345 NR5A2O00482 541 aa8.36□□□□□ -1.07
MCF2L-223ENST00000473345 WNT9BO14905 357 aa8.36□□□□□ -1.07
MCF2L-223ENST00000473345 PIP5K1BO14986 540 aa8.36□□□□□ -1.07
MCF2L-223ENST00000473345 POLR3GO15318 223 aaPredicted RBP8.36□□□□□ -1.07
MCF2L-223ENST00000473345 TM9SF1O15321 606 aa8.36□□□□□ -1.07
MCF2L-223ENST00000473345 STAMBPO95630 424 aa8.36□□□□□ -1.07
MCF2L-223ENST00000473345 CELA3BP08861 270 aa8.36□□□□□ -1.07
MCF2L-223ENST00000473345 MYL2P10916 166 aa8.36□□□□□ -1.07
MCF2L-223ENST00000473345 ATP6V1C1P21283 382 aa8.36□□□□□ -1.07
MCF2L-223ENST00000473345 CRHR1P34998 444 aa8.36□□□□□ -1.07
MCF2L-223ENST00000473345 MDH1P40925 334 aaKnown RBP8.36□□□□□ -1.07
MCF2L-223ENST00000473345 GYS2P54840 703 aa8.36□□□□□ -1.07
MCF2L-223ENST00000473345 WDR4P57081 412 aaKnown RBP8.36□□□□□ -1.07
MCF2L-223ENST00000473345 HGFACQ04756 655 aa8.36□□□□□ -1.07
MCF2L-223ENST00000473345 CBFBQ13951 182 aa8.36□□□□□ -1.07
MCF2L-223ENST00000473345 ADIPOQQ15848 244 aa8.36□□□□□ -1.07
MCF2L-223ENST00000473345 CARTPTQ16568 116 aa8.36□□□□□ -1.07
MCF2L-223ENST00000473345 XKR7Q5GH72 579 aa8.36□□□□□ -1.07
MCF2L-223ENST00000473345 DEF8Q6ZN54 512 aa8.36□□□□□ -1.07
MCF2L-223ENST00000473345 RNF165Q6ZSG1 346 aa8.36□□□□□ -1.07
MCF2L-223ENST00000473345 C10orf107Q8IVU9 208 aa8.36□□□□□ -1.07
MCF2L-223ENST00000473345 RIMKLAQ8IXN7 391 aa8.36□□□□□ -1.07
MCF2L-223ENST00000473345 C4orf33Q8N1A6 199 aa8.36□□□□□ -1.07
MCF2L-223ENST00000473345 DEPDC4Q8N2C3 294 aa8.36□□□□□ -1.07
MCF2L-223ENST00000473345 TOR1AIP2Q8NFQ8 470 aa8.36□□□□□ -1.07
MCF2L-223ENST00000473345 TCP10LQ8TDR4 215 aa8.36□□□□□ -1.07
MCF2L-223ENST00000473345 ADAMTS15Q8TE58 950 aa8.36□□□□□ -1.07
MCF2L-223ENST00000473345 OR5P2Q8WZ92 322 aa8.36□□□□□ -1.07
MCF2L-223ENST00000473345 ST8SIA1Q92185 356 aa8.36□□□□□ -1.07
MCF2L-223ENST00000473345 NMUR2Q9GZQ4 415 aa8.36□□□□□ -1.07
MCF2L-223ENST00000473345 ZNF350Q9GZX5 532 aa8.36□□□□□ -1.07
MCF2L-223ENST00000473345 HOXD1Q9GZZ0 328 aa8.36□□□□□ -1.07
MCF2L-223ENST00000473345 IQCGQ9H095 443 aaKnown RBP8.36□□□□□ -1.07
MCF2L-223ENST00000473345 CCDC134Q9H6E4 229 aa8.36□□□□□ -1.07
MCF2L-223ENST00000473345 DCDC2Q9UHG0 476 aa8.36□□□□□ -1.07
MCF2L-223ENST00000473345 AZIN1O14977 448 aa8.35□□□□□ -1.07
MCF2L-223ENST00000473345 SPRY1O43609 319 aaPredicted RBP8.35□□□□□ -1.07
MCF2L-223ENST00000473345 GLRA3O75311 464 aa8.35□□□□□ -1.07
MCF2L-223ENST00000473345 SPAG7O75391 227 aa8.35□□□□□ -1.07
MCF2L-223ENST00000473345 CRCPO75575 148 aa8.35□□□□□ -1.07
MCF2L-223ENST00000473345 RGS9O75916 674 aaPredicted RBP8.35□□□□□ -1.07
MCF2L-223ENST00000473345 PMS2P2O95744 297 aa8.35□□□□□ -1.07
MCF2L-223ENST00000473345 HSPA4LO95757 839 aa8.35□□□□□ -1.07
MCF2L-223ENST00000473345 CSTAP01040 98 aa8.35□□□□□ -1.07
MCF2L-223ENST00000473345 TACSTD2P09758 323 aa8.35□□□□□ -1.07
MCF2L-223ENST00000473345 CSF3P09919 207 aa8.35□□□□□ -1.07
MCF2L-223ENST00000473345 TFPIP10646 304 aa8.35□□□□□ -1.07
MCF2L-223ENST00000473345 RYKP34925 604 aa8.35□□□□□ -1.07
MCF2L-223ENST00000473345 CCT5P48643 541 aa8.35□□□□□ -1.07
MCF2L-223ENST00000473345 P2RY4P51582 365 aa8.35□□□□□ -1.07
MCF2L-223ENST00000473345 SLC17A1Q14916 467 aa8.35□□□□□ -1.07
MCF2L-223ENST00000473345 AP1ARQ63HQ0 302 aa8.35□□□□□ -1.07
MCF2L-223ENST00000473345 TYW3Q6IPR3 259 aaKnown RBP8.35□□□□□ -1.07
MCF2L-223ENST00000473345 KLHL17Q6TDP4 642 aa8.35□□□□□ -1.07
MCF2L-223ENST00000473345 CASP12Q6UXS9 341 aa8.35□□□□□ -1.07
MCF2L-223ENST00000473345 C1orf229Q6ZS94 237 aaPredicted RBP8.35□□□□□ -1.07
MCF2L-223ENST00000473345 TWIST2Q8WVJ9 160 aa8.35□□□□□ -1.07
MCF2L-223ENST00000473345 CNOT9Q92600 299 aaKnown RBP8.35□□□□□ -1.07
MCF2L-223ENST00000473345 RAB8BQ92930 207 aa8.35□□□□□ -1.07
MCF2L-223ENST00000473345 COQ8BQ96D53 544 aa8.35□□□□□ -1.07
MCF2L-223ENST00000473345 MTERF3Q96E29 417 aa8.35□□□□□ -1.07
MCF2L-223ENST00000473345 VRK1Q99986 396 aaPredicted RBP8.35□□□□□ -1.07
MCF2L-223ENST00000473345 PIMREGQ9BSJ6 248 aa8.35□□□□□ -1.07
MCF2L-223ENST00000473345 MECRQ9BV79 373 aa8.35□□□□□ -1.07
MCF2L-223ENST00000473345 KCNK9Q9NPC2 374 aa8.35□□□□□ -1.07
MCF2L-223ENST00000473345 CHRNA9Q9UGM1 479 aa8.35□□□□□ -1.07
MCF2L-223ENST00000473345 LOC390937A0A1W2PQ73 354 aa8.34□□□□□ -1.07
MCF2L-223ENST00000473345 H3BNH8 94 aa8.34□□□□□ -1.07
MCF2L-223ENST00000473345 NDUFS8O00217 210 aa8.34□□□□□ -1.07
MCF2L-223ENST00000473345 COPEO14579 308 aa8.34□□□□□ -1.07
MCF2L-223ENST00000473345 TCF21O43680 179 aa8.34□□□□□ -1.07
MCF2L-223ENST00000473345 SCN2BO60939 215 aa8.34□□□□□ -1.07
MCF2L-223ENST00000473345 PEX11AO75192 247 aa8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms