RNA–Protein interactions for RNA: ENST00000473036.2

TPM3-216, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 746 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-216ENST00000473036 TRIM15Q9C019 465 aa11.74□□□□□ -0.53
TPM3-216ENST00000473036 OR11A1Q9GZK7 315 aa11.74□□□□□ -0.53
TPM3-216ENST00000473036 RNF122Q9H9V4 155 aa11.74□□□□□ -0.53
TPM3-216ENST00000473036 MED13LQ71F56 2210 aa11.74□□□□□ -0.53
TPM3-216ENST00000473036 TMED7-TICAM2A0A0A6YYA0 188 aa11.73□□□□□ -0.53
TPM3-216ENST00000473036 ELOVL7A1L3X0 281 aa11.73□□□□□ -0.53
TPM3-216ENST00000473036 SLC22A20A6NK97 555 aa11.73□□□□□ -0.53
TPM3-216ENST00000473036 GSTA4O15217 222 aa11.73□□□□□ -0.53
TPM3-216ENST00000473036 CIB2O75838 187 aa11.73□□□□□ -0.53
TPM3-216ENST00000473036 TACR3P29371 465 aa11.73□□□□□ -0.53
TPM3-216ENST00000473036 SLC1A3P43003 542 aa11.73□□□□□ -0.53
TPM3-216ENST00000473036 KCNJ5P48544 419 aa11.73□□□□□ -0.53
TPM3-216ENST00000473036 LIPEQ05469 1076 aa11.73□□□□□ -0.53
TPM3-216ENST00000473036 TRAP1Q12931 704 aaKnown RBP11.73□□□□□ -0.53
TPM3-216ENST00000473036 ZSWIM7Q19AV6 140 aa11.73□□□□□ -0.53
TPM3-216ENST00000473036 HBMQ6B0K9 141 aa11.73□□□□□ -0.53
TPM3-216ENST00000473036 ESPNLQ6ZVH7 1005 aa11.73□□□□□ -0.53
TPM3-216ENST00000473036 CDH24Q86UP0 819 aa11.73□□□□□ -0.53
TPM3-216ENST00000473036 KRT73Q86Y46 540 aa11.73□□□□□ -0.53
TPM3-216ENST00000473036 ARMC8Q8IUR7 673 aa11.73□□□□□ -0.53
TPM3-216ENST00000473036 ACBD4Q8NC06 268 aa11.73□□□□□ -0.53
TPM3-216ENST00000473036 RASSF5Q8WWW0 418 aa11.73□□□□□ -0.53
TPM3-216ENST00000473036 ASB5Q8WWX0 329 aa11.73□□□□□ -0.53
TPM3-216ENST00000473036 ROBO4Q8WZ75 1007 aa11.73□□□□□ -0.53
TPM3-216ENST00000473036 OSTF1Q92882 214 aa11.73□□□□□ -0.53
TPM3-216ENST00000473036 C3orf49Q96BT1 292 aa11.73□□□□□ -0.53
TPM3-216ENST00000473036 ZNF607Q96SK3 696 aa11.73□□□□□ -0.53
TPM3-216ENST00000473036 MCCC2Q9HCC0 563 aa11.73□□□□□ -0.53
TPM3-216ENST00000473036 COQ3Q9NZJ6 369 aa11.73□□□□□ -0.53
TPM3-216ENST00000473036 MAGEL2Q9UJ55 1249 aa11.73□□□□□ -0.53
TPM3-216ENST00000473036 ING1Q9UK53 422 aaPredicted RBP11.73□□□□□ -0.53
TPM3-216ENST00000473036 ITGB1BP2Q9UKP3 347 aa11.73□□□□□ -0.53
TPM3-216ENST00000473036 PACSIN3Q9UKS6 424 aa11.73□□□□□ -0.53
TPM3-216ENST00000473036 ZNF232Q9UNY5 417 aa11.73□□□□□ -0.53
TPM3-216ENST00000473036 ANGPT4Q9Y264 503 aa11.73□□□□□ -0.53
TPM3-216ENST00000473036 TMED7Q9Y3B3 224 aa11.73□□□□□ -0.53
TPM3-216ENST00000473036 ABCA2Q9BZC7 2435 aa11.72□□□□□ -0.53
TPM3-216ENST00000473036 IGHV3-15A0A0B4J1V0 119 aa11.72□□□□□ -0.53
TPM3-216ENST00000473036 HSPB2A8KAH6 182 aa11.72□□□□□ -0.53
TPM3-216ENST00000473036 FAM220BPB1ANY3 271 aa11.72□□□□□ -0.53
TPM3-216ENST00000473036 ZNF814B7Z6K7 855 aa11.72□□□□□ -0.53
TPM3-216ENST00000473036 M0R3H8 397 aa11.72□□□□□ -0.53
TPM3-216ENST00000473036 SERPINB7O75635 380 aa11.72□□□□□ -0.53
TPM3-216ENST00000473036 LGI1O95970 557 aa11.72□□□□□ -0.53
TPM3-216ENST00000473036 IL2RAP01589 272 aa11.72□□□□□ -0.53
TPM3-216ENST00000473036 TMIGD3P0DMS9 266 aaPredicted RBP11.72□□□□□ -0.53
TPM3-216ENST00000473036 IMPDH2P12268 514 aa11.72□□□□□ -0.53
TPM3-216ENST00000473036 CCNA2P20248 432 aa11.72□□□□□ -0.53
TPM3-216ENST00000473036 BMP5P22003 454 aa11.72□□□□□ -0.53
TPM3-216ENST00000473036 ENPP1P22413 925 aa11.72□□□□□ -0.53
TPM3-216ENST00000473036 CTSSP25774 331 aa11.72□□□□□ -0.53
TPM3-216ENST00000473036 APOBEC1P41238 236 aaKnown RBP11.72□□□□□ -0.53
TPM3-216ENST00000473036 KIR2DL2P43627 348 aaPredicted RBP11.72□□□□□ -0.53
TPM3-216ENST00000473036 CARD18P57730 90 aa11.72□□□□□ -0.53
TPM3-216ENST00000473036 TRIM25Q14258 630 aaKnown RBP11.72□□□□□ -0.53
TPM3-216ENST00000473036 HSPB2Q16082 182 aa11.72□□□□□ -0.53
TPM3-216ENST00000473036 ZNF239Q16600 458 aaKnown RBP11.72□□□□□ -0.53
TPM3-216ENST00000473036 SYT14P1Q58G82 188 aa11.72□□□□□ -0.53
TPM3-216ENST00000473036 MTX3Q5HYI7 312 aa11.72□□□□□ -0.53
TPM3-216ENST00000473036 C3orf33Q6P1S2 294 aa11.72□□□□□ -0.53
TPM3-216ENST00000473036 VWA1Q6PCB0 445 aa11.72□□□□□ -0.53
TPM3-216ENST00000473036 PATL1Q86TB9 770 aaKnown RBP11.72□□□□□ -0.53
TPM3-216ENST00000473036 CADM2Q8N3J6 435 aa11.72□□□□□ -0.53
TPM3-216ENST00000473036 BHLHE22Q8NFJ8 381 aaPredicted RBP11.72□□□□□ -0.53
TPM3-216ENST00000473036 CA5BP1Q8WTZ4 195 aa11.72□□□□□ -0.53
TPM3-216ENST00000473036 TMEM234Q8WY98 164 aa11.72□□□□□ -0.53
TPM3-216ENST00000473036 SLC35B4Q969S0 331 aa11.72□□□□□ -0.53
TPM3-216ENST00000473036 STARD4Q96DR4 205 aa11.72□□□□□ -0.53
TPM3-216ENST00000473036 ASB9Q96DX5 294 aa11.72□□□□□ -0.53
TPM3-216ENST00000473036 ARHGDIGQ99819 225 aa11.72□□□□□ -0.53
TPM3-216ENST00000473036 CADM1Q9BY67 442 aaKnown RBP11.72□□□□□ -0.53
TPM3-216ENST00000473036 ARMC7Q9H6L4 198 aa11.72□□□□□ -0.53
TPM3-216ENST00000473036 JKAMPQ9P055 326 aa11.72□□□□□ -0.53
TPM3-216ENST00000473036 CHRNA9Q9UGM1 479 aa11.72□□□□□ -0.53
TPM3-216ENST00000473036 CD300AQ9UGN4 299 aa11.72□□□□□ -0.53
TPM3-216ENST00000473036 PRDM4Q9UKN5 801 aa11.72□□□□□ -0.53
TPM3-216ENST00000473036 CLEC4AQ9UMR7 237 aa11.72□□□□□ -0.53
TPM3-216ENST00000473036 ZNF175Q9Y473 711 aa11.72□□□□□ -0.53
TPM3-216ENST00000473036 A0A1W2PNV4 684 aa11.71□□□□□ -0.53
TPM3-216ENST00000473036 ERICH4A6NGS2 130 aa11.71□□□□□ -0.53
TPM3-216ENST00000473036 RAMP1O60894 148 aa11.71□□□□□ -0.53
TPM3-216ENST00000473036 LYPD3O95274 346 aa11.71□□□□□ -0.53
TPM3-216ENST00000473036 CGAP01215 116 aa11.71□□□□□ -0.53
TPM3-216ENST00000473036 THY1P04216 161 aa11.71□□□□□ -0.53
TPM3-216ENST00000473036 IGFBP2P18065 325 aa11.71□□□□□ -0.53
TPM3-216ENST00000473036 TNFRSF1BP20333 461 aa11.71□□□□□ -0.53
TPM3-216ENST00000473036 GSK3BP49841 420 aa11.71□□□□□ -0.53
TPM3-216ENST00000473036 POLR2HP52434 150 aaKnown RBP11.71□□□□□ -0.53
TPM3-216ENST00000473036 RPS3AP61247 264 aaKnown RBP11.71□□□□□ -0.53
TPM3-216ENST00000473036 EGR4Q05215 589 aa11.71□□□□□ -0.53
TPM3-216ENST00000473036 MYBPHQ13203 477 aa11.71□□□□□ -0.53
TPM3-216ENST00000473036 SGCBQ16585 318 aa11.71□□□□□ -0.53
TPM3-216ENST00000473036 NRF1Q16656 503 aa11.71□□□□□ -0.53
TPM3-216ENST00000473036 WBP2NLQ6ICG8 309 aa11.71□□□□□ -0.53
TPM3-216ENST00000473036 PGM2L1Q6PCE3 622 aa11.71□□□□□ -0.53
TPM3-216ENST00000473036 ZNF550Q7Z398 422 aa11.71□□□□□ -0.53
TPM3-216ENST00000473036 BTLAQ7Z6A9 289 aa11.71□□□□□ -0.53
TPM3-216ENST00000473036 ATG4DQ86TL0 474 aaPredicted RBP11.71□□□□□ -0.53
TPM3-216ENST00000473036 ZNF440Q8IYI8 595 aa11.71□□□□□ -0.53
TPM3-216ENST00000473036 MICU2Q8IYU8 434 aa11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms