RNA–Protein interactions for RNA: ENST00000472880.1

COL9A3-210, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 3

Gene COL9A3, Length 959 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-210ENST00000472880 CNOT9Q92600 299 aaKnown RBP17.41■□□□□ 0.38
COL9A3-210ENST00000472880 DDIT4LQ96D03 193 aa17.41■□□□□ 0.38
COL9A3-210ENST00000472880 PAIP2Q9BPZ3 127 aaKnown RBP17.41■□□□□ 0.38
COL9A3-210ENST00000472880 GRIP2Q9C0E4 1043 aa17.41■□□□□ 0.38
COL9A3-210ENST00000472880 SLC38A1Q9H2H9 487 aa17.41■□□□□ 0.38
COL9A3-210ENST00000472880 PNPOQ9NVS9 261 aa17.41■□□□□ 0.38
COL9A3-210ENST00000472880 AIG1Q9NVV5 245 aa17.41■□□□□ 0.38
COL9A3-210ENST00000472880 MGAT4BQ9UQ53 548 aa17.41■□□□□ 0.38
COL9A3-210ENST00000472880 TMED7Q9Y3B3 224 aa17.41■□□□□ 0.38
COL9A3-210ENST00000472880 JMJD1CQ15652 2540 aa17.4■□□□□ 0.38
COL9A3-210ENST00000472880 GOLGA8QA0A0J9YX86 632 aa17.4■□□□□ 0.38
COL9A3-210ENST00000472880 GOLGA8OA6NCC3 632 aa17.4■□□□□ 0.38
COL9A3-210ENST00000472880 AGAP5A6NIR3 686 aa17.4■□□□□ 0.38
COL9A3-210ENST00000472880 GOLGA8NF8WBI6 632 aa17.4■□□□□ 0.38
COL9A3-210ENST00000472880 ADAM11O75078 769 aa17.4■□□□□ 0.38
COL9A3-210ENST00000472880 NDUFS7O75251 213 aa17.4■□□□□ 0.38
COL9A3-210ENST00000472880 CD8AP01732 235 aa17.4■□□□□ 0.38
COL9A3-210ENST00000472880 CHRM4P08173 479 aa17.4■□□□□ 0.38
COL9A3-210ENST00000472880 ALDOCP09972 364 aaKnown RBP17.4■□□□□ 0.38
COL9A3-210ENST00000472880 UQCRBP14927 111 aa17.4■□□□□ 0.38
COL9A3-210ENST00000472880 ZNF83P51522 516 aa17.4■□□□□ 0.38
COL9A3-210ENST00000472880 POLR2HP52434 150 aaKnown RBP17.4■□□□□ 0.38
COL9A3-210ENST00000472880 UFM1P61960 85 aa17.4■□□□□ 0.38
COL9A3-210ENST00000472880 LRRC74AQ0VAA2 488 aa17.4■□□□□ 0.38
COL9A3-210ENST00000472880 BST1Q10588 318 aa17.4■□□□□ 0.38
COL9A3-210ENST00000472880 MPP2Q14168 576 aa17.4■□□□□ 0.38
COL9A3-210ENST00000472880 NRF1Q16656 503 aa17.4■□□□□ 0.38
COL9A3-210ENST00000472880 SLC22A25Q6T423 547 aa17.4■□□□□ 0.38
COL9A3-210ENST00000472880 LRRC74BQ6ZQY2 392 aa17.4■□□□□ 0.38
COL9A3-210ENST00000472880 CCDC103Q8IW40 242 aa17.4■□□□□ 0.38
COL9A3-210ENST00000472880 TEX37Q96LM6 180 aa17.4■□□□□ 0.38
COL9A3-210ENST00000472880 ZBTB18Q99592 522 aa17.4■□□□□ 0.38
COL9A3-210ENST00000472880 GDF2Q9UK05 429 aaPredicted RBP17.4■□□□□ 0.38
COL9A3-210ENST00000472880 TRAPPC4Q9Y296 219 aa17.4■□□□□ 0.38
COL9A3-210ENST00000472880 SLC9A8Q9Y2E8 581 aa17.4■□□□□ 0.38
COL9A3-210ENST00000472880 ZNF208O43345 1280 aa17.39■□□□□ 0.37
COL9A3-210ENST00000472880 EIF1BO60739 113 aaKnown RBP17.39■□□□□ 0.37
COL9A3-210ENST00000472880 CRLF1O75462 422 aa17.39■□□□□ 0.37
COL9A3-210ENST00000472880 C1QCP02747 245 aa17.39■□□□□ 0.37
COL9A3-210ENST00000472880 PGRP06401 933 aa17.39■□□□□ 0.37
COL9A3-210ENST00000472880 THBS1P07996 1170 aa17.39■□□□□ 0.37
COL9A3-210ENST00000472880 NR2F1P10589 423 aa17.39■□□□□ 0.37
COL9A3-210ENST00000472880 PTAFRP25105 342 aa17.39■□□□□ 0.37
COL9A3-210ENST00000472880 SLC35A1P78382 337 aa17.39■□□□□ 0.37
COL9A3-210ENST00000472880 OR7E24Q6IFN5 339 aa17.39■□□□□ 0.37
COL9A3-210ENST00000472880 ZNF621Q6ZSS3 439 aa17.39■□□□□ 0.37
COL9A3-210ENST00000472880 SPATA19Q7Z5L4 167 aa17.39■□□□□ 0.37
COL9A3-210ENST00000472880 PNPT1Q8TCS8 783 aaKnown RBP17.39■□□□□ 0.37
COL9A3-210ENST00000472880 PMM1Q92871 262 aa17.39■□□□□ 0.37
COL9A3-210ENST00000472880 ADAD1Q96M93 576 aaKnown RBP17.39■□□□□ 0.37
COL9A3-210ENST00000472880 OR52E6Q96RD3 313 aa17.39■□□□□ 0.37
COL9A3-210ENST00000472880 NAA11Q9BSU3 229 aaPredicted RBP17.39■□□□□ 0.37
COL9A3-210ENST00000472880 INPP5KQ9BT40 448 aa17.39■□□□□ 0.37
COL9A3-210ENST00000472880 OSGIN1Q9UJX0 560 aa17.39■□□□□ 0.37
COL9A3-210ENST00000472880 ADAM21Q9UKJ8 722 aa17.39■□□□□ 0.37
COL9A3-210ENST00000472880 SLC25A15Q9Y619 301 aa17.39■□□□□ 0.37
COL9A3-210ENST00000472880 DNHD1Q96M86 4753 aa17.39■□□□□ 0.37
COL9A3-210ENST00000472880 A0A1W2PR80 420 aa17.38■□□□□ 0.37
COL9A3-210ENST00000472880 TMEM72A0PK05 275 aa17.38■□□□□ 0.37
COL9A3-210ENST00000472880 M0R1B8 84 aa17.38■□□□□ 0.37
COL9A3-210ENST00000472880 SDHDO14521 159 aa17.38■□□□□ 0.37
COL9A3-210ENST00000472880 GSNP06396 782 aa17.38■□□□□ 0.37
COL9A3-210ENST00000472880 DBIP07108 87 aaKnown RBP17.38■□□□□ 0.37
COL9A3-210ENST00000472880 IL7RP16871 459 aa17.38■□□□□ 0.37
COL9A3-210ENST00000472880 PTNP21246 168 aa17.38■□□□□ 0.37
COL9A3-210ENST00000472880 CD40P25942 277 aa17.38■□□□□ 0.37
COL9A3-210ENST00000472880 TACR3P29371 465 aa17.38■□□□□ 0.37
COL9A3-210ENST00000472880 CDKN2CP42773 168 aa17.38■□□□□ 0.37
COL9A3-210ENST00000472880 SLC1A3P43003 542 aa17.38■□□□□ 0.37
COL9A3-210ENST00000472880 NUDT6P53370 316 aa17.38■□□□□ 0.37
COL9A3-210ENST00000472880 H3F3AP84243 136 aa17.38■□□□□ 0.37
COL9A3-210ENST00000472880 SPOCK1Q08629 439 aa17.38■□□□□ 0.37
COL9A3-210ENST00000472880 MRPL2Q5T653 305 aaKnown RBP17.38■□□□□ 0.37
COL9A3-210ENST00000472880 HHATQ5VTY9 493 aa17.38■□□□□ 0.37
COL9A3-210ENST00000472880 DNM1P46Q6ZS02 220 aa17.38■□□□□ 0.37
COL9A3-210ENST00000472880 DEPDC4Q8N2C3 294 aa17.38■□□□□ 0.37
COL9A3-210ENST00000472880 MDFIQ99750 246 aa17.38■□□□□ 0.37
COL9A3-210ENST00000472880 CACNG6Q9BXT2 260 aa17.38■□□□□ 0.37
COL9A3-210ENST00000472880 MTHFD2LQ9H903 347 aaPredicted RBP17.38■□□□□ 0.37
COL9A3-210ENST00000472880 PARPBPQ9NWS1 579 aa17.38■□□□□ 0.37
COL9A3-210ENST00000472880 UPB1Q9UBR1 384 aa17.38■□□□□ 0.37
COL9A3-210ENST00000472880 B3GALT5Q9Y2C3 310 aa17.38■□□□□ 0.37
COL9A3-210ENST00000472880 FLVCR1Q9Y5Y0 555 aa17.38■□□□□ 0.37
COL9A3-210ENST00000472880 CR1P17927 2039 aa17.37■□□□□ 0.37
COL9A3-210ENST00000472880 CFAP73A6NFT4 308 aa17.37■□□□□ 0.37
COL9A3-210ENST00000472880 FAAHO00519 579 aa17.37■□□□□ 0.37
COL9A3-210ENST00000472880 SSX4O60224 188 aa17.37■□□□□ 0.37
COL9A3-210ENST00000472880 ITGA5P08648 1049 aa17.37■□□□□ 0.37
COL9A3-210ENST00000472880 IMPDH2P12268 514 aa17.37■□□□□ 0.37
COL9A3-210ENST00000472880 RPS4Y1P22090 263 aaKnown RBP17.37■□□□□ 0.37
COL9A3-210ENST00000472880 IL12AP29459 219 aa17.37■□□□□ 0.37
COL9A3-210ENST00000472880 TTKP33981 857 aa17.37■□□□□ 0.37
COL9A3-210ENST00000472880 NTF4P34130 210 aa17.37■□□□□ 0.37
COL9A3-210ENST00000472880 MAP2K6P52564 334 aa17.37■□□□□ 0.37
COL9A3-210ENST00000472880 GABRA6Q16445 453 aa17.37■□□□□ 0.37
COL9A3-210ENST00000472880 COX20Q5RI15 118 aa17.37■□□□□ 0.37
COL9A3-210ENST00000472880 C9orf135Q5VTT2 229 aa17.37■□□□□ 0.37
COL9A3-210ENST00000472880 PEX5LQ8IYB4 626 aa17.37■□□□□ 0.37
COL9A3-210ENST00000472880 ZNF440Q8IYI8 595 aa17.37■□□□□ 0.37
COL9A3-210ENST00000472880 FBXL14Q8N1E6 418 aa17.37■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms