RNA–Protein interactions for RNA: ENST00000472216.2

SPC25-203, Transcript of SPC25, NDC80 kinetochore complex component, humanhuman

TSL 5

Gene SPC25, Length 754 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPC25-203ENST00000472216 SLC2A6Q9UGQ3 507 aa7.85□□□□□ -1.15
SPC25-203ENST00000472216 PHF11Q9UIL8 331 aa7.85□□□□□ -1.15
SPC25-203ENST00000472216 GPR55Q9Y2T6 319 aaPredicted RBP7.85□□□□□ -1.15
SPC25-203ENST00000472216 DSPPQ9NZW4 1301 aa7.84□□□□□ -1.15
SPC25-203ENST00000472216 GPR171O14626 319 aa7.84□□□□□ -1.15
SPC25-203ENST00000472216 UBOX5O94941 541 aa7.84□□□□□ -1.15
SPC25-203ENST00000472216 TBX6O95947 436 aaPredicted RBP7.84□□□□□ -1.15
SPC25-203ENST00000472216 TPM2P07951 284 aa7.84□□□□□ -1.15
SPC25-203ENST00000472216 HIST1H2AGP0C0S8 130 aaPredicted RBP7.84□□□□□ -1.15
SPC25-203ENST00000472216 THRBP10828 461 aa7.84□□□□□ -1.15
SPC25-203ENST00000472216 HIST1H2ADP20671 130 aa7.84□□□□□ -1.15
SPC25-203ENST00000472216 CPT2P23786 658 aa7.84□□□□□ -1.15
SPC25-203ENST00000472216 CFHR2P36980 270 aa7.84□□□□□ -1.15
SPC25-203ENST00000472216 HABP2Q14520 560 aaPredicted RBP7.84□□□□□ -1.15
SPC25-203ENST00000472216 PDK3Q15120 406 aa7.84□□□□□ -1.15
SPC25-203ENST00000472216 NPTX1Q15818 432 aa7.84□□□□□ -1.15
SPC25-203ENST00000472216 TSTQ16762 297 aaKnown RBP7.84□□□□□ -1.15
SPC25-203ENST00000472216 C9orf66Q5T8R8 295 aa7.84□□□□□ -1.15
SPC25-203ENST00000472216 GKAP1Q5VSY0 366 aaPredicted RBP7.84□□□□□ -1.15
SPC25-203ENST00000472216 IL23RQ5VWK5 629 aa7.84□□□□□ -1.15
SPC25-203ENST00000472216 TMEM65Q6PI78 240 aa7.84□□□□□ -1.15
SPC25-203ENST00000472216 PAQR6Q6TCH4 344 aa7.84□□□□□ -1.15
SPC25-203ENST00000472216 ZNF572Q7Z3I7 529 aaPredicted RBP7.84□□□□□ -1.15
SPC25-203ENST00000472216 MARCH3Q86UD3 253 aa7.84□□□□□ -1.15
SPC25-203ENST00000472216 MYPOPQ86VE0 399 aaPredicted RBP7.84□□□□□ -1.15
SPC25-203ENST00000472216 LRRC28Q86X40 367 aaPredicted RBP7.84□□□□□ -1.15
SPC25-203ENST00000472216 RFX6Q8HWS3 928 aa7.84□□□□□ -1.15
SPC25-203ENST00000472216 TMCO5AQ8N6Q1 288 aa7.84□□□□□ -1.15
SPC25-203ENST00000472216 CPEB3Q8NE35 698 aaKnown RBP7.84□□□□□ -1.15
SPC25-203ENST00000472216 LHX4Q969G2 390 aa7.84□□□□□ -1.15
SPC25-203ENST00000472216 PLEKHA8Q96JA3 519 aa7.84□□□□□ -1.15
SPC25-203ENST00000472216 HIST1H2AHQ96KK5 128 aa7.84□□□□□ -1.15
SPC25-203ENST00000472216 OR5M11Q96RB7 305 aa7.84□□□□□ -1.15
SPC25-203ENST00000472216 HIST1H2AJQ99878 128 aa7.84□□□□□ -1.15
SPC25-203ENST00000472216 H2AFJQ9BTM1 129 aa7.84□□□□□ -1.15
SPC25-203ENST00000472216 LAT2Q9GZY6 243 aa7.84□□□□□ -1.15
SPC25-203ENST00000472216 GANQ9H2C0 597 aa7.84□□□□□ -1.15
SPC25-203ENST00000472216 COQ10BQ9H8M1 238 aa7.84□□□□□ -1.15
SPC25-203ENST00000472216 TMEM45AQ9NWC5 275 aa7.84□□□□□ -1.15
SPC25-203ENST00000472216 NDE1Q9NXR1 346 aa7.84□□□□□ -1.15
SPC25-203ENST00000472216 NOP53Q9NZM5 478 aaKnown RBP7.84□□□□□ -1.15
SPC25-203ENST00000472216 CFAP45Q9UL16 551 aa7.84□□□□□ -1.15
SPC25-203ENST00000472216 PLLPQ9Y342 182 aa7.84□□□□□ -1.15
SPC25-203ENST00000472216 LRP1BQ9NZR2 4599 aa7.84□□□□□ -1.15
SPC25-203ENST00000472216 ARPC4-TTLL3A0A0A6YYG9 625 aa7.83□□□□□ -1.16
SPC25-203ENST00000472216 A0A1W2PRB8 838 aa7.83□□□□□ -1.16
SPC25-203ENST00000472216 GLOD5A6NK44 160 aa7.83□□□□□ -1.16
SPC25-203ENST00000472216 SDR42E2A6NKP2 422 aa7.83□□□□□ -1.16
SPC25-203ENST00000472216 RTCAO00442 366 aaKnown RBP7.83□□□□□ -1.16
SPC25-203ENST00000472216 ICMTO60725 284 aa7.83□□□□□ -1.16
SPC25-203ENST00000472216 SCELO95171 688 aa7.83□□□□□ -1.16
SPC25-203ENST00000472216 WNT2P09544 360 aa7.83□□□□□ -1.16
SPC25-203ENST00000472216 MYBL1P10243 752 aa7.83□□□□□ -1.16
SPC25-203ENST00000472216 CBR1P16152 277 aa7.83□□□□□ -1.16
SPC25-203ENST00000472216 MAKP20794 623 aa7.83□□□□□ -1.16
SPC25-203ENST00000472216 ELK4P28324 431 aa7.83□□□□□ -1.16
SPC25-203ENST00000472216 GTF2E2P29084 291 aaKnown RBP7.83□□□□□ -1.16
SPC25-203ENST00000472216 SLC7A1P30825 629 aa7.83□□□□□ -1.16
SPC25-203ENST00000472216 GP5P40197 560 aa7.83□□□□□ -1.16
SPC25-203ENST00000472216 EIF1P41567 113 aaKnown RBP7.83□□□□□ -1.16
SPC25-203ENST00000472216 TUBA1BP68363 451 aa7.83□□□□□ -1.16
SPC25-203ENST00000472216 TUBA4AP68366 448 aa7.83□□□□□ -1.16
SPC25-203ENST00000472216 GALK2Q01415 458 aa7.83□□□□□ -1.16
SPC25-203ENST00000472216 CUL1Q13616 776 aa7.83□□□□□ -1.16
SPC25-203ENST00000472216 EXOSC7Q15024 291 aaKnown RBP7.83□□□□□ -1.16
SPC25-203ENST00000472216 RNLSQ5VYX0 342 aa7.83□□□□□ -1.16
SPC25-203ENST00000472216 RNF165Q6ZSG1 346 aa7.83□□□□□ -1.16
SPC25-203ENST00000472216 TUBA1AQ71U36 451 aa7.83□□□□□ -1.16
SPC25-203ENST00000472216 UBE3DQ7Z6J8 389 aa7.83□□□□□ -1.16
SPC25-203ENST00000472216 LMNTD2Q8IXW0 634 aa7.83□□□□□ -1.16
SPC25-203ENST00000472216 MPP5Q8N3R9 675 aa7.83□□□□□ -1.16
SPC25-203ENST00000472216 NPEPL1Q8NDH3 523 aa7.83□□□□□ -1.16
SPC25-203ENST00000472216 ITLN1Q8WWA0 313 aa7.83□□□□□ -1.16
SPC25-203ENST00000472216 SLC9A6Q92581 669 aa7.83□□□□□ -1.16
SPC25-203ENST00000472216 ERP27Q96DN0 273 aa7.83□□□□□ -1.16
SPC25-203ENST00000472216 TRIM11Q96F44 468 aa7.83□□□□□ -1.16
SPC25-203ENST00000472216 ZNF317Q96PQ6 595 aaPredicted RBP7.83□□□□□ -1.16
SPC25-203ENST00000472216 NMUR2Q9GZQ4 415 aa7.83□□□□□ -1.16
SPC25-203ENST00000472216 HIPK2Q9H2X6 1198 aa7.83□□□□□ -1.16
SPC25-203ENST00000472216 EHD1Q9H4M9 534 aa7.83□□□□□ -1.16
SPC25-203ENST00000472216 PARVBQ9HBI1 364 aa7.83□□□□□ -1.16
SPC25-203ENST00000472216 SAYSD1Q9NPB0 183 aa7.83□□□□□ -1.16
SPC25-203ENST00000472216 SERINC1Q9NRX5 453 aa7.83□□□□□ -1.16
SPC25-203ENST00000472216 MED17Q9NVC6 651 aa7.83□□□□□ -1.16
SPC25-203ENST00000472216 CXorf65A6NEN9 183 aa7.82□□□□□ -1.16
SPC25-203ENST00000472216 VGLL3A8MV65 326 aa7.82□□□□□ -1.16
SPC25-203ENST00000472216 GOLGA6L6A8MZA4 724 aa7.82□□□□□ -1.16
SPC25-203ENST00000472216 J3QW42 95 aa7.82□□□□□ -1.16
SPC25-203ENST00000472216 F2RL2O00254 374 aa7.82□□□□□ -1.16
SPC25-203ENST00000472216 NR5A2O00482 541 aa7.82□□□□□ -1.16
SPC25-203ENST00000472216 HCKP08631 526 aa7.82□□□□□ -1.16
SPC25-203ENST00000472216 PIK3R1P27986 724 aa7.82□□□□□ -1.16
SPC25-203ENST00000472216 THBS3P49746 956 aa7.82□□□□□ -1.16
SPC25-203ENST00000472216 CLCN7P51798 805 aa7.82□□□□□ -1.16
SPC25-203ENST00000472216 ACVR1Q04771 509 aa7.82□□□□□ -1.16
SPC25-203ENST00000472216 PDE7AQ13946 482 aa7.82□□□□□ -1.16
SPC25-203ENST00000472216 TSTD2Q5T7W7 516 aa7.82□□□□□ -1.16
SPC25-203ENST00000472216 PLBD1Q6P4A8 553 aa7.82□□□□□ -1.16
SPC25-203ENST00000472216 CASP12Q6UXS9 341 aa7.82□□□□□ -1.16
SPC25-203ENST00000472216 ANKRD13BQ86YJ7 626 aa7.82□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms