RNA–Protein interactions for RNA: ENST00000470076.1

COL7A1-208, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 2

Gene COL7A1, Length 651 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-208ENST00000470076 ADAM11O75078 769 aa15.4■□□□□ 0.06
COL7A1-208ENST00000470076 TP53P04637 393 aaPredicted RBP15.4■□□□□ 0.06
COL7A1-208ENST00000470076 MAP2K6P52564 334 aa15.4■□□□□ 0.06
COL7A1-208ENST00000470076 OR2B6P58173 313 aa15.4■□□□□ 0.06
COL7A1-208ENST00000470076 H3F3AP84243 136 aa15.4■□□□□ 0.06
COL7A1-208ENST00000470076 GNA13Q14344 377 aa15.4■□□□□ 0.06
COL7A1-208ENST00000470076 OR7E24Q6IFN5 339 aa15.4■□□□□ 0.06
COL7A1-208ENST00000470076 LRRC74BQ6ZQY2 392 aa15.4■□□□□ 0.06
COL7A1-208ENST00000470076 HMGN2P46Q86SG4 172 aa15.4■□□□□ 0.06
COL7A1-208ENST00000470076 CCDC103Q8IW40 242 aa15.4■□□□□ 0.06
COL7A1-208ENST00000470076 PIAS4Q8N2W9 510 aaPredicted RBP15.4■□□□□ 0.06
COL7A1-208ENST00000470076 MAPK1IP1LQ8NDC0 245 aa15.4■□□□□ 0.06
COL7A1-208ENST00000470076 OR52N5Q8NH56 324 aa15.4■□□□□ 0.06
COL7A1-208ENST00000470076 DDIT4LQ96D03 193 aa15.4■□□□□ 0.06
COL7A1-208ENST00000470076 DNAJA3Q96EY1 480 aa15.4■□□□□ 0.06
COL7A1-208ENST00000470076 TEX37Q96LM6 180 aa15.4■□□□□ 0.06
COL7A1-208ENST00000470076 MDFIQ99750 246 aa15.4■□□□□ 0.06
COL7A1-208ENST00000470076 SLC38A1Q9H2H9 487 aa15.4■□□□□ 0.06
COL7A1-208ENST00000470076 MTHFD2LQ9H903 347 aaPredicted RBP15.4■□□□□ 0.06
COL7A1-208ENST00000470076 PARPBPQ9NWS1 579 aa15.4■□□□□ 0.06
COL7A1-208ENST00000470076 ADAM21Q9UKJ8 722 aa15.4■□□□□ 0.06
COL7A1-208ENST00000470076 SLC25A15Q9Y619 301 aa15.4■□□□□ 0.06
COL7A1-208ENST00000470076 MXRA5Q9NR99 2828 aa15.4■□□□□ 0.06
COL7A1-208ENST00000470076 RTTNQ86VV8 2226 aa15.4■□□□□ 0.06
COL7A1-208ENST00000470076 TMED7-TICAM2A0A0A6YYA0 188 aa15.39■□□□□ 0.05
COL7A1-208ENST00000470076 FAAHO00519 579 aa15.39■□□□□ 0.05
COL7A1-208ENST00000470076 NDUFS7O75251 213 aa15.39■□□□□ 0.05
COL7A1-208ENST00000470076 PGRP06401 933 aa15.39■□□□□ 0.05
COL7A1-208ENST00000470076 ALDOCP09972 364 aaKnown RBP15.39■□□□□ 0.05
COL7A1-208ENST00000470076 UQCRBP14927 111 aa15.39■□□□□ 0.05
COL7A1-208ENST00000470076 CCNA2P20248 432 aa15.39■□□□□ 0.05
COL7A1-208ENST00000470076 NTF4P34130 210 aa15.39■□□□□ 0.05
COL7A1-208ENST00000470076 POLR2HP52434 150 aaKnown RBP15.39■□□□□ 0.05
COL7A1-208ENST00000470076 UFM1P61960 85 aa15.39■□□□□ 0.05
COL7A1-208ENST00000470076 SLC35A1P78382 337 aa15.39■□□□□ 0.05
COL7A1-208ENST00000470076 MPP2Q14168 576 aa15.39■□□□□ 0.05
COL7A1-208ENST00000470076 SYPL1Q16563 259 aa15.39■□□□□ 0.05
COL7A1-208ENST00000470076 SPATA19Q7Z5L4 167 aa15.39■□□□□ 0.05
COL7A1-208ENST00000470076 ANKFN1Q8N957 763 aa15.39■□□□□ 0.05
COL7A1-208ENST00000470076 WDR60Q8WVS4 1066 aa15.39■□□□□ 0.05
COL7A1-208ENST00000470076 MUS81Q96NY9 551 aa15.39■□□□□ 0.05
COL7A1-208ENST00000470076 NAA11Q9BSU3 229 aaPredicted RBP15.39■□□□□ 0.05
COL7A1-208ENST00000470076 CENPHQ9H3R5 247 aa15.39■□□□□ 0.05
COL7A1-208ENST00000470076 KCNK9Q9NPC2 374 aa15.39■□□□□ 0.05
COL7A1-208ENST00000470076 PNPOQ9NVS9 261 aa15.39■□□□□ 0.05
COL7A1-208ENST00000470076 AIG1Q9NVV5 245 aa15.39■□□□□ 0.05
COL7A1-208ENST00000470076 OSGIN1Q9UJX0 560 aa15.39■□□□□ 0.05
COL7A1-208ENST00000470076 GDF2Q9UK05 429 aaPredicted RBP15.39■□□□□ 0.05
COL7A1-208ENST00000470076 B3GALT5Q9Y2C3 310 aa15.39■□□□□ 0.05
COL7A1-208ENST00000470076 SLC9A8Q9Y2E8 581 aa15.39■□□□□ 0.05
COL7A1-208ENST00000470076 TMED7Q9Y3B3 224 aa15.39■□□□□ 0.05
COL7A1-208ENST00000470076 FBN1P35555 2871 aaKnown RBP15.38■□□□□ 0.05
COL7A1-208ENST00000470076 ANK3Q12955 4377 aaKnown RBP15.38■□□□□ 0.05
COL7A1-208ENST00000470076 AP3D1O14617 1153 aa15.38■□□□□ 0.05
COL7A1-208ENST00000470076 TLX2O43763 284 aaPredicted RBP15.38■□□□□ 0.05
COL7A1-208ENST00000470076 C1QCP02747 245 aa15.38■□□□□ 0.05
COL7A1-208ENST00000470076 CHRM4P08173 479 aa15.38■□□□□ 0.05
COL7A1-208ENST00000470076 IL7RP16871 459 aa15.38■□□□□ 0.05
COL7A1-208ENST00000470076 RPS4Y1P22090 263 aaKnown RBP15.38■□□□□ 0.05
COL7A1-208ENST00000470076 CD40P25942 277 aa15.38■□□□□ 0.05
COL7A1-208ENST00000470076 TACR3P29371 465 aa15.38■□□□□ 0.05
COL7A1-208ENST00000470076 TTKP33981 857 aa15.38■□□□□ 0.05
COL7A1-208ENST00000470076 SLC1A3P43003 542 aa15.38■□□□□ 0.05
COL7A1-208ENST00000470076 ZNF83P51522 516 aa15.38■□□□□ 0.05
COL7A1-208ENST00000470076 NME5P56597 212 aa15.38■□□□□ 0.05
COL7A1-208ENST00000470076 BST1Q10588 318 aa15.38■□□□□ 0.05
COL7A1-208ENST00000470076 GABRA6Q16445 453 aa15.38■□□□□ 0.05
COL7A1-208ENST00000470076 TNFAIP8L3Q5GJ75 292 aa15.38■□□□□ 0.05
COL7A1-208ENST00000470076 SLC22A25Q6T423 547 aa15.38■□□□□ 0.05
COL7A1-208ENST00000470076 CASP12Q6UXS9 341 aa15.38■□□□□ 0.05
COL7A1-208ENST00000470076 ZNF621Q6ZSS3 439 aa15.38■□□□□ 0.05
COL7A1-208ENST00000470076 DEPDC4Q8N2C3 294 aa15.38■□□□□ 0.05
COL7A1-208ENST00000470076 ADAD1Q96M93 576 aaKnown RBP15.38■□□□□ 0.05
COL7A1-208ENST00000470076 OR52E6Q96RD3 313 aa15.38■□□□□ 0.05
COL7A1-208ENST00000470076 DHRS9Q9BPW9 319 aa15.38■□□□□ 0.05
COL7A1-208ENST00000470076 NOL12Q9UGY1 213 aaKnown RBP eCLIP15.38■□□□□ 0.05
COL7A1-208ENST00000470076 POU2F3Q9UKI9 436 aa15.38■□□□□ 0.05
COL7A1-208ENST00000470076 PRDM4Q9UKN5 801 aa15.38■□□□□ 0.05
COL7A1-208ENST00000470076 V9GYY5 206 aaPredicted RBP15.38■□□□□ 0.05
COL7A1-208ENST00000470076 TMEM72A0PK05 275 aa15.37■□□□□ 0.05
COL7A1-208ENST00000470076 CFAP73A6NFT4 308 aa15.37■□□□□ 0.05
COL7A1-208ENST00000470076 E7EQL1 145 aa15.37■□□□□ 0.05
COL7A1-208ENST00000470076 PDLIM1O00151 329 aa15.37■□□□□ 0.05
COL7A1-208ENST00000470076 SDHDO14521 159 aa15.37■□□□□ 0.05
COL7A1-208ENST00000470076 DBIP07108 87 aaKnown RBP15.37■□□□□ 0.05
COL7A1-208ENST00000470076 ITGA5P08648 1049 aa15.37■□□□□ 0.05
COL7A1-208ENST00000470076 NR2F1P10589 423 aa15.37■□□□□ 0.05
COL7A1-208ENST00000470076 IMPDH2P12268 514 aa15.37■□□□□ 0.05
COL7A1-208ENST00000470076 CDKN2CP42773 168 aa15.37■□□□□ 0.05
COL7A1-208ENST00000470076 CEP85LQ5SZL2 805 aa15.37■□□□□ 0.05
COL7A1-208ENST00000470076 MRPL2Q5T653 305 aaKnown RBP15.37■□□□□ 0.05
COL7A1-208ENST00000470076 C1QTNF12Q5T7M4 302 aa15.37■□□□□ 0.05
COL7A1-208ENST00000470076 PAQR6Q6TCH4 344 aa15.37■□□□□ 0.05
COL7A1-208ENST00000470076 CROCCP2Q86T23 111 aa15.37■□□□□ 0.05
COL7A1-208ENST00000470076 ZNF440Q8IYI8 595 aa15.37■□□□□ 0.05
COL7A1-208ENST00000470076 C17orf78Q8N4C9 275 aa15.37■□□□□ 0.05
COL7A1-208ENST00000470076 GLB1L3Q8NCI6 653 aaPredicted RBP15.37■□□□□ 0.05
COL7A1-208ENST00000470076 C1orf162Q8NEQ5 155 aaPredicted RBP15.37■□□□□ 0.05
COL7A1-208ENST00000470076 ZBTB18Q99592 522 aa15.37■□□□□ 0.05
COL7A1-208ENST00000470076 PAIP2Q9BPZ3 127 aaKnown RBP15.37■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms