RNA–Protein interactions for RNA: ENST00000469802.5

COL9A3-208, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 2

Gene COL9A3, Length 680 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-208ENST00000469802 TMEM72A0PK05 275 aa14.39□□□□□ -0.11
COL9A3-208ENST00000469802 CDHR4A6H8M9 788 aa14.39□□□□□ -0.11
COL9A3-208ENST00000469802 DPRXA6NFQ7 191 aa14.39□□□□□ -0.11
COL9A3-208ENST00000469802 CFAP73A6NFT4 308 aa14.39□□□□□ -0.11
COL9A3-208ENST00000469802 GPR171O14626 319 aa14.39□□□□□ -0.11
COL9A3-208ENST00000469802 CLOCKO15516 846 aa14.39□□□□□ -0.11
COL9A3-208ENST00000469802 LY6G6DO95868 133 aa14.39□□□□□ -0.11
COL9A3-208ENST00000469802 NR2F1P10589 423 aa14.39□□□□□ -0.11
COL9A3-208ENST00000469802 TACR3P29371 465 aa14.39□□□□□ -0.11
COL9A3-208ENST00000469802 SLC1A3P43003 542 aa14.39□□□□□ -0.11
COL9A3-208ENST00000469802 MAP2K6P52564 334 aa14.39□□□□□ -0.11
COL9A3-208ENST00000469802 RPS4XP62701 263 aaKnown RBP14.39□□□□□ -0.11
COL9A3-208ENST00000469802 PPA1Q15181 289 aa14.39□□□□□ -0.11
COL9A3-208ENST00000469802 ZNF672Q499Z4 452 aaPredicted RBP14.39□□□□□ -0.11
COL9A3-208ENST00000469802 TIMM23BQ5SRD1 257 aa14.39□□□□□ -0.11
COL9A3-208ENST00000469802 FBXW9Q5XUX1 488 aa14.39□□□□□ -0.11
COL9A3-208ENST00000469802 NXNQ6DKJ4 435 aa14.39□□□□□ -0.11
COL9A3-208ENST00000469802 ALKBH2Q6NS38 261 aa14.39□□□□□ -0.11
COL9A3-208ENST00000469802 P2RY8Q86VZ1 359 aa14.39□□□□□ -0.11
COL9A3-208ENST00000469802 ZNF100Q8IYN0 542 aa14.39□□□□□ -0.11
COL9A3-208ENST00000469802 ZNF433Q8N7K0 673 aaPredicted RBP14.39□□□□□ -0.11
COL9A3-208ENST00000469802 KBTBD8Q8NFY9 601 aa14.39□□□□□ -0.11
COL9A3-208ENST00000469802 OR9I1Q8NGQ6 314 aa14.39□□□□□ -0.11
COL9A3-208ENST00000469802 APH1AQ96BI3 265 aa14.39□□□□□ -0.11
COL9A3-208ENST00000469802 TRIM2Q9C040 744 aa14.39□□□□□ -0.11
COL9A3-208ENST00000469802 NPAP1Q9NZP6 1156 aa14.39□□□□□ -0.11
COL9A3-208ENST00000469802 TMEM181Q9P2C4 612 aa14.39□□□□□ -0.11
COL9A3-208ENST00000469802 P2RX2Q9UBL9 471 aa14.39□□□□□ -0.11
COL9A3-208ENST00000469802 NOSIPQ9Y314 301 aaKnown RBP14.39□□□□□ -0.11
COL9A3-208ENST00000469802 TMED7Q9Y3B3 224 aa14.39□□□□□ -0.11
COL9A3-208ENST00000469802 ZC3H12DA2A288 527 aaKnown RBP14.38□□□□□ -0.11
COL9A3-208ENST00000469802 OR5H1A6NKK0 313 aa14.38□□□□□ -0.11
COL9A3-208ENST00000469802 THBS1P07996 1170 aa14.38□□□□□ -0.11
COL9A3-208ENST00000469802 SOD3P08294 240 aa14.38□□□□□ -0.11
COL9A3-208ENST00000469802 TFPTP0C1Z6 253 aa14.38□□□□□ -0.11
COL9A3-208ENST00000469802 IMPDH2P12268 514 aa14.38□□□□□ -0.11
COL9A3-208ENST00000469802 ETFAP13804 333 aa14.38□□□□□ -0.11
COL9A3-208ENST00000469802 IL7RP16871 459 aa14.38□□□□□ -0.11
COL9A3-208ENST00000469802 GGT1P19440 569 aa14.38□□□□□ -0.11
COL9A3-208ENST00000469802 GNA13Q14344 377 aa14.38□□□□□ -0.11
COL9A3-208ENST00000469802 CAPRIN1Q14444 709 aaKnown RBP14.38□□□□□ -0.11
COL9A3-208ENST00000469802 GTDC1Q4AE62 458 aa14.38□□□□□ -0.11
COL9A3-208ENST00000469802 RNF220Q5VTB9 566 aa14.38□□□□□ -0.11
COL9A3-208ENST00000469802 ZNF836Q6ZNA1 936 aa14.38□□□□□ -0.11
COL9A3-208ENST00000469802 CCDC103Q8IW40 242 aa14.38□□□□□ -0.11
COL9A3-208ENST00000469802 NEUROG1Q92886 237 aa14.38□□□□□ -0.11
COL9A3-208ENST00000469802 DNAJA3Q96EY1 480 aa14.38□□□□□ -0.11
COL9A3-208ENST00000469802 ADAM19Q9H013 955 aa14.38□□□□□ -0.11
COL9A3-208ENST00000469802 TPT1P8Q9HAU6 139 aa14.38□□□□□ -0.11
COL9A3-208ENST00000469802 PRDM4Q9UKN5 801 aa14.38□□□□□ -0.11
COL9A3-208ENST00000469802 LAMP3Q9UQV4 416 aa14.38□□□□□ -0.11
COL9A3-208ENST00000469802 CSPG4Q6UVK1 2322 aa14.38□□□□□ -0.11
COL9A3-208ENST00000469802 ABCA2Q9BZC7 2435 aa14.37□□□□□ -0.11
COL9A3-208ENST00000469802 SHISA9B4DS77 424 aa14.37□□□□□ -0.11
COL9A3-208ENST00000469802 PDLIM1O00151 329 aa14.37□□□□□ -0.11
COL9A3-208ENST00000469802 UBDO15205 165 aa14.37□□□□□ -0.11
COL9A3-208ENST00000469802 ERLIN1O75477 346 aa14.37□□□□□ -0.11
COL9A3-208ENST00000469802 IGHV3-9P01782 118 aa14.37□□□□□ -0.11
COL9A3-208ENST00000469802 UQCRBP14927 111 aa14.37□□□□□ -0.11
COL9A3-208ENST00000469802 HOXB9P17482 250 aaPredicted RBP14.37□□□□□ -0.11
COL9A3-208ENST00000469802 CCNA2P20248 432 aa14.37□□□□□ -0.11
COL9A3-208ENST00000469802 ACAA2P42765 397 aaKnown RBP14.37□□□□□ -0.11
COL9A3-208ENST00000469802 MRPL19P49406 292 aaKnown RBP14.37□□□□□ -0.11
COL9A3-208ENST00000469802 ATP5J2P56134 94 aa14.37□□□□□ -0.11
COL9A3-208ENST00000469802 DSTNP60981 165 aa14.37□□□□□ -0.11
COL9A3-208ENST00000469802 SLC35A1P78382 337 aa14.37□□□□□ -0.11
COL9A3-208ENST00000469802 STK11Q15831 433 aa14.37□□□□□ -0.11
COL9A3-208ENST00000469802 PGGHGQ32M88 737 aa14.37□□□□□ -0.11
COL9A3-208ENST00000469802 LIN52Q52LA3 116 aa14.37□□□□□ -0.11
COL9A3-208ENST00000469802 VRK2Q86Y07 508 aa14.37□□□□□ -0.11
COL9A3-208ENST00000469802 PEX5LQ8IYB4 626 aa14.37□□□□□ -0.11
COL9A3-208ENST00000469802 ZNF440Q8IYI8 595 aa14.37□□□□□ -0.11
COL9A3-208ENST00000469802 SLC38A5Q8WUX1 472 aa14.37□□□□□ -0.11
COL9A3-208ENST00000469802 VPS33AQ96AX1 596 aa14.37□□□□□ -0.11
COL9A3-208ENST00000469802 DDIT4LQ96D03 193 aa14.37□□□□□ -0.11
COL9A3-208ENST00000469802 AURKBQ96GD4 344 aaPredicted RBP14.37□□□□□ -0.11
COL9A3-208ENST00000469802 ITCHQ96J02 903 aa14.37□□□□□ -0.11
COL9A3-208ENST00000469802 AMBRA1Q9C0C7 1298 aa14.37□□□□□ -0.11
COL9A3-208ENST00000469802 RLIMQ9NVW2 624 aa14.37□□□□□ -0.11
COL9A3-208ENST00000469802 CALML5Q9NZT1 146 aa14.37□□□□□ -0.11
COL9A3-208ENST00000469802 CHST2Q9Y4C5 530 aa14.37□□□□□ -0.11
COL9A3-208ENST00000469802 MAGED1Q9Y5V3 778 aaPredicted RBP14.37□□□□□ -0.11
COL9A3-208ENST00000469802 FLVCR1Q9Y5Y0 555 aa14.37□□□□□ -0.11
COL9A3-208ENST00000469802 HEATR1Q9H583 2144 aaKnown RBP14.36□□□□□ -0.11
COL9A3-208ENST00000469802 EIF1BO60739 113 aaKnown RBP14.36□□□□□ -0.11
COL9A3-208ENST00000469802 RAD51DO75771 328 aa14.36□□□□□ -0.11
COL9A3-208ENST00000469802 BCHEP06276 602 aa14.36□□□□□ -0.11
COL9A3-208ENST00000469802 ITGA5P08648 1049 aa14.36□□□□□ -0.11
COL9A3-208ENST00000469802 POLR2JP52435 117 aaKnown RBP14.36□□□□□ -0.11
COL9A3-208ENST00000469802 CRISP3P54108 245 aa14.36□□□□□ -0.11
COL9A3-208ENST00000469802 OR2B6P58173 313 aa14.36□□□□□ -0.11
COL9A3-208ENST00000469802 SLC17A1Q14916 467 aa14.36□□□□□ -0.11
COL9A3-208ENST00000469802 PAQR6Q6TCH4 344 aa14.36□□□□□ -0.11
COL9A3-208ENST00000469802 OR52P1PQ8NH57 321 aa14.36□□□□□ -0.11
COL9A3-208ENST00000469802 SMAP2Q8WU79 429 aaPredicted RBP14.36□□□□□ -0.11
COL9A3-208ENST00000469802 MUCL1Q96DR8 90 aa14.36□□□□□ -0.11
COL9A3-208ENST00000469802 GRIP2Q9C0E4 1043 aa14.36□□□□□ -0.11
COL9A3-208ENST00000469802 RMND5AQ9H871 391 aa14.36□□□□□ -0.11
COL9A3-208ENST00000469802 ASB6Q9NWX5 421 aa14.36□□□□□ -0.11
COL9A3-208ENST00000469802 TAS2R16Q9NYV7 291 aa14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms