RNA–Protein interactions for RNA: ENST00000469129.1

SMC1A-205, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 3

Gene SMC1A, Length 847 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-205ENST00000469129 KIAA1549Q9HCM3 1950 aa8.52□□□□□ -1.05
SMC1A-205ENST00000469129 TRAV36DV7A0A075B6V5 113 aa8.52□□□□□ -1.05
SMC1A-205ENST00000469129 IGHV1-45A0A0A0MS14 117 aa8.52□□□□□ -1.05
SMC1A-205ENST00000469129 FAM47E-STBD1D6RA91 191 aa8.52□□□□□ -1.05
SMC1A-205ENST00000469129 CDX4O14627 284 aaPredicted RBP8.52□□□□□ -1.05
SMC1A-205ENST00000469129 TP53I11O14683 189 aa8.52□□□□□ -1.05
SMC1A-205ENST00000469129 GNB5O14775 395 aa8.52□□□□□ -1.05
SMC1A-205ENST00000469129 ARPC3O15145 178 aa8.52□□□□□ -1.05
SMC1A-205ENST00000469129 AIREO43918 545 aa8.52□□□□□ -1.05
SMC1A-205ENST00000469129 PRKNO60260 465 aaPredicted RBP8.52□□□□□ -1.05
SMC1A-205ENST00000469129 FOXD2O60548 495 aaPredicted RBP8.52□□□□□ -1.05
SMC1A-205ENST00000469129 CBFA2T3O75081 653 aa8.52□□□□□ -1.05
SMC1A-205ENST00000469129 CSO75390 466 aaKnown RBP8.52□□□□□ -1.05
SMC1A-205ENST00000469129 STK17BO94768 372 aa8.52□□□□□ -1.05
SMC1A-205ENST00000469129 PPP1R3DO95685 299 aa8.52□□□□□ -1.05
SMC1A-205ENST00000469129 DLGAP3O95886 979 aa8.52□□□□□ -1.05
SMC1A-205ENST00000469129 MT-ATP6P00846 226 aa8.52□□□□□ -1.05
SMC1A-205ENST00000469129 SCG5P05408 212 aa8.52□□□□□ -1.05
SMC1A-205ENST00000469129 FBXO45P0C2W1 286 aa8.52□□□□□ -1.05
SMC1A-205ENST00000469129 COX6A1P12074 109 aa8.52□□□□□ -1.05
SMC1A-205ENST00000469129 PEPDP12955 493 aa8.52□□□□□ -1.05
SMC1A-205ENST00000469129 FUT1P19526 365 aa8.52□□□□□ -1.05
SMC1A-205ENST00000469129 TACR3P29371 465 aa8.52□□□□□ -1.05
SMC1A-205ENST00000469129 ATP6V1E1P36543 226 aa8.52□□□□□ -1.05
SMC1A-205ENST00000469129 RPL4P36578 427 aaKnown RBP8.52□□□□□ -1.05
SMC1A-205ENST00000469129 CLK1P49759 484 aaKnown RBP8.52□□□□□ -1.05
SMC1A-205ENST00000469129 MLLT10P55197 1068 aa8.52□□□□□ -1.05
SMC1A-205ENST00000469129 WNT4P56705 351 aa8.52□□□□□ -1.05
SMC1A-205ENST00000469129 FXYD6P3P58550 94 aa8.52□□□□□ -1.05
SMC1A-205ENST00000469129 ACTC1P68032 377 aa8.52□□□□□ -1.05
SMC1A-205ENST00000469129 ACTA1P68133 377 aa8.52□□□□□ -1.05
SMC1A-205ENST00000469129 FOXK2Q01167 660 aa8.52□□□□□ -1.05
SMC1A-205ENST00000469129 LGALS3BPQ08380 585 aa8.52□□□□□ -1.05
SMC1A-205ENST00000469129 MLLT11Q13015 90 aaPredicted RBP8.52□□□□□ -1.05
SMC1A-205ENST00000469129 SF3A2Q15428 464 aaKnown RBP8.52□□□□□ -1.05
SMC1A-205ENST00000469129 ZNF74Q16587 644 aa8.52□□□□□ -1.05
SMC1A-205ENST00000469129 CTF1Q16619 201 aa8.52□□□□□ -1.05
SMC1A-205ENST00000469129 BTBD16Q32M84 506 aa8.52□□□□□ -1.05
SMC1A-205ENST00000469129 CDCP2Q5VXM1 449 aa8.52□□□□□ -1.05
SMC1A-205ENST00000469129 LCN10Q6JVE6 187 aa8.52□□□□□ -1.05
SMC1A-205ENST00000469129 MEPCEQ7L2J0 689 aaKnown RBP8.52□□□□□ -1.05
SMC1A-205ENST00000469129 NANOGNBQ7Z5D8 188 aa8.52□□□□□ -1.05
SMC1A-205ENST00000469129 CPOQ8IVL8 374 aa8.52□□□□□ -1.05
SMC1A-205ENST00000469129 C10orf53Q8N6V4 93 aa8.52□□□□□ -1.05
SMC1A-205ENST00000469129 NANOGP1Q8N7R0 232 aa8.52□□□□□ -1.05
SMC1A-205ENST00000469129 OR51A7Q8NH64 312 aa8.52□□□□□ -1.05
SMC1A-205ENST00000469129 M1APQ8TC57 530 aa8.52□□□□□ -1.05
SMC1A-205ENST00000469129 ELP5Q8TE02 316 aa8.52□□□□□ -1.05
SMC1A-205ENST00000469129 RNF138Q8WVD3 245 aa8.52□□□□□ -1.05
SMC1A-205ENST00000469129 C8orf44Q96CB5 159 aa8.52□□□□□ -1.05
SMC1A-205ENST00000469129 MGLLQ99685 303 aa8.52□□□□□ -1.05
SMC1A-205ENST00000469129 TAPBPLQ9BX59 468 aa8.52□□□□□ -1.05
SMC1A-205ENST00000469129 ADAM19Q9H013 955 aa8.52□□□□□ -1.05
SMC1A-205ENST00000469129 FKRPQ9H9S5 495 aa8.52□□□□□ -1.05
SMC1A-205ENST00000469129 MMP25Q9NPA2 562 aa8.52□□□□□ -1.05
SMC1A-205ENST00000469129 ISYNA1Q9NPH2 558 aa8.52□□□□□ -1.05
SMC1A-205ENST00000469129 HINT3Q9NQE9 182 aaKnown RBP8.52□□□□□ -1.05
SMC1A-205ENST00000469129 NANSQ9NR45 359 aa8.52□□□□□ -1.05
SMC1A-205ENST00000469129 KLRF1Q9NZS2 232 aa8.52□□□□□ -1.05
SMC1A-205ENST00000469129 PPP4R1LQ9P1A2 415 aa8.52□□□□□ -1.05
SMC1A-205ENST00000469129 MYOTQ9UBF9 498 aa8.52□□□□□ -1.05
SMC1A-205ENST00000469129 ZNF229Q9UJW7 825 aa8.52□□□□□ -1.05
SMC1A-205ENST00000469129 EXOGQ9Y2C4 368 aaKnown RBP8.52□□□□□ -1.05
SMC1A-205ENST00000469129 HIF3AQ9Y2N7 669 aa8.52□□□□□ -1.05
SMC1A-205ENST00000469129 LSM2Q9Y333 95 aaKnown RBP8.52□□□□□ -1.05
SMC1A-205ENST00000469129 PCDHGA3Q9Y5H0 932 aa8.52□□□□□ -1.05
SMC1A-205ENST00000469129 B3GALT1Q9Y5Z6 326 aa8.52□□□□□ -1.05
SMC1A-205ENST00000469129 SDK2Q58EX2 2172 aa8.51□□□□□ -1.05
SMC1A-205ENST00000469129 IGKV1D-42A0A075B6H8 117 aa8.51□□□□□ -1.05
SMC1A-205ENST00000469129 TMED7-TICAM2A0A0A6YYA0 188 aa8.51□□□□□ -1.05
SMC1A-205ENST00000469129 NSG1A0A0A6YYJ2 146 aa8.51□□□□□ -1.05
SMC1A-205ENST00000469129 M0R082 166 aa8.51□□□□□ -1.05
SMC1A-205ENST00000469129 WWP2O00308 870 aa8.51□□□□□ -1.05
SMC1A-205ENST00000469129 IMPA2O14732 288 aa8.51□□□□□ -1.05
SMC1A-205ENST00000469129 IGHA1P01876 353 aa8.51□□□□□ -1.05
SMC1A-205ENST00000469129 HIST1H2ABP04908 130 aa8.51□□□□□ -1.05
SMC1A-205ENST00000469129 UMODP07911 640 aa8.51□□□□□ -1.05
SMC1A-205ENST00000469129 HSMCR30P0CW71 290 aa8.51□□□□□ -1.05
SMC1A-205ENST00000469129 APEHP13798 732 aaKnown RBP8.51□□□□□ -1.05
SMC1A-205ENST00000469129 LIPAP38571 399 aa8.51□□□□□ -1.05
SMC1A-205ENST00000469129 RGS6P49758 472 aa8.51□□□□□ -1.05
SMC1A-205ENST00000469129 ZNF41P51814 821 aaPredicted RBP8.51□□□□□ -1.05
SMC1A-205ENST00000469129 MAP2K6P52564 334 aa8.51□□□□□ -1.05
SMC1A-205ENST00000469129 FBXW4P57775 412 aa8.51□□□□□ -1.05
SMC1A-205ENST00000469129 FOXL2P58012 376 aa8.51□□□□□ -1.05
SMC1A-205ENST00000469129 RPS7P62081 194 aaKnown RBP8.51□□□□□ -1.05
SMC1A-205ENST00000469129 TUBA1BP68363 451 aa8.51□□□□□ -1.05
SMC1A-205ENST00000469129 INSM1Q01101 510 aaPredicted RBP8.51□□□□□ -1.05
SMC1A-205ENST00000469129 SPEM2Q0P670 501 aa8.51□□□□□ -1.05
SMC1A-205ENST00000469129 QPRTQ15274 297 aa8.51□□□□□ -1.05
SMC1A-205ENST00000469129 SPHARQ15513 63 aa8.51□□□□□ -1.05
SMC1A-205ENST00000469129 CSRP2Q16527 193 aa8.51□□□□□ -1.05
SMC1A-205ENST00000469129 NTRK2Q16620 822 aa8.51□□□□□ -1.05
SMC1A-205ENST00000469129 TSTQ16762 297 aaKnown RBP8.51□□□□□ -1.05
SMC1A-205ENST00000469129 DGUOKQ16854 277 aa8.51□□□□□ -1.05
SMC1A-205ENST00000469129 COL28A1Q2UY09 1125 aa8.51□□□□□ -1.05
SMC1A-205ENST00000469129 CCDC157Q569K6 752 aa8.51□□□□□ -1.05
SMC1A-205ENST00000469129 PLBD1Q6P4A8 553 aa8.51□□□□□ -1.05
SMC1A-205ENST00000469129 TMEM81Q6P7N7 255 aa8.51□□□□□ -1.05
SMC1A-205ENST00000469129 FAM199XQ6PEV8 388 aaPredicted RBP8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms