RNA–Protein interactions for RNA: ENST00000465892.6

TGFBR3-204, Transcript of transforming growth factor beta receptor 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TGFBR3, Length 2,908 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-204ENST00000465892 ACSS1Q9NUB1 689 aaPredicted RBP12.87□□□□□ -0.35
TGFBR3-204ENST00000465892 ST6GALNAC2Q9UJ37 374 aa12.87□□□□□ -0.35
TGFBR3-204ENST00000465892 UBE2QL1A1L167 161 aa12.86□□□□□ -0.35
TGFBR3-204ENST00000465892 DISC1C4P0D8 188 aa12.86□□□□□ -0.35
TGFBR3-204ENST00000465892 EDNRAP25101 427 aa12.86□□□□□ -0.35
TGFBR3-204ENST00000465892 KCNJ3P48549 501 aa12.86□□□□□ -0.35
TGFBR3-204ENST00000465892 PTH2RP49190 550 aa12.86□□□□□ -0.35
TGFBR3-204ENST00000465892 ANXA11P50995 505 aaKnown RBP12.86□□□□□ -0.35
TGFBR3-204ENST00000465892 DLX5P56178 289 aa12.86□□□□□ -0.35
TGFBR3-204ENST00000465892 UBXN2BQ14CS0 331 aa12.86□□□□□ -0.35
TGFBR3-204ENST00000465892 GUCA2BQ16661 112 aa12.86□□□□□ -0.35
TGFBR3-204ENST00000465892 NUP43Q8NFH3 380 aa12.86□□□□□ -0.35
TGFBR3-204ENST00000465892 TSNAXQ99598 290 aaKnown RBP12.86□□□□□ -0.35
TGFBR3-204ENST00000465892 NKX3-1Q99801 234 aaPredicted RBP12.86□□□□□ -0.35
TGFBR3-204ENST00000465892 DNTTIP1Q9H147 329 aa12.86□□□□□ -0.35
TGFBR3-204ENST00000465892 WDR13Q9H1Z4 485 aa12.86□□□□□ -0.35
TGFBR3-204ENST00000465892 TMEM185BQ9H7F4 350 aa12.86□□□□□ -0.35
TGFBR3-204ENST00000465892 EMC3Q9P0I2 261 aa12.86□□□□□ -0.35
TGFBR3-204ENST00000465892 FAM86C2PA6NEL3 165 aa12.86□□□□□ -0.35
TGFBR3-204ENST00000465892 SLC22A31A6NKX4 558 aa12.86□□□□□ -0.35
TGFBR3-204ENST00000465892 PRSS44E7EML9 344 aa12.86□□□□□ -0.35
TGFBR3-204ENST00000465892 ABCD4O14678 606 aa12.86□□□□□ -0.35
TGFBR3-204ENST00000465892 PRAMEF2O60811 474 aa12.86□□□□□ -0.35
TGFBR3-204ENST00000465892 ADAMTS4O75173 837 aa12.86□□□□□ -0.35
TGFBR3-204ENST00000465892 ECDO95905 644 aaPredicted RBP12.86□□□□□ -0.35
TGFBR3-204ENST00000465892 HOXA1P49639 335 aaPredicted RBP12.86□□□□□ -0.35
TGFBR3-204ENST00000465892 RPS11P62280 158 aaKnown RBP eCLIP12.86□□□□□ -0.35
TGFBR3-204ENST00000465892 OR4C11Q6IEV9 310 aa12.86□□□□□ -0.35
TGFBR3-204ENST00000465892 HAGHLQ6PII5 290 aaPredicted RBP12.86□□□□□ -0.35
TGFBR3-204ENST00000465892 ZC3H14Q6PJT7 736 aaKnown RBP12.86□□□□□ -0.35
TGFBR3-204ENST00000465892 MCATQ8IVS2 390 aaKnown RBP12.86□□□□□ -0.35
TGFBR3-204ENST00000465892 DVL3Q92997 716 aaPredicted RBP12.86□□□□□ -0.35
TGFBR3-204ENST00000465892 PPP1R16AQ96I34 528 aa12.86□□□□□ -0.35
TGFBR3-204ENST00000465892 HS6ST2Q96MM7 605 aa12.86□□□□□ -0.35
TGFBR3-204ENST00000465892 TMPRSS13Q9BYE2 586 aa12.86□□□□□ -0.35
TGFBR3-204ENST00000465892 TM7SF3Q9NS93 570 aa12.86□□□□□ -0.35
TGFBR3-204ENST00000465892 C4orf51C9J302 202 aa12.85□□□□□ -0.35
TGFBR3-204ENST00000465892 MAN2B1O00754 1011 aa12.85□□□□□ -0.35
TGFBR3-204ENST00000465892 IMPA2O14732 288 aa12.85□□□□□ -0.35
TGFBR3-204ENST00000465892 PIN1P1O15428 100 aa12.85□□□□□ -0.35
TGFBR3-204ENST00000465892 ARL6IP5O75915 188 aa12.85□□□□□ -0.35
TGFBR3-204ENST00000465892 AP3S2P59780 193 aa12.85□□□□□ -0.35
TGFBR3-204ENST00000465892 PCGF3Q3KNV8 242 aa12.85□□□□□ -0.35
TGFBR3-204ENST00000465892 C4orf46Q504U0 113 aa12.85□□□□□ -0.35
TGFBR3-204ENST00000465892 MPP7Q5T2T1 576 aa12.85□□□□□ -0.35
TGFBR3-204ENST00000465892 FAM46CQ5VWP2 391 aa12.85□□□□□ -0.35
TGFBR3-204ENST00000465892 SNX33Q8WV41 574 aa12.85□□□□□ -0.35
TGFBR3-204ENST00000465892 NSMAFQ92636 917 aa12.85□□□□□ -0.35
TGFBR3-204ENST00000465892 AICDAQ9GZX7 198 aa12.85□□□□□ -0.35
TGFBR3-204ENST00000465892 CCL26Q9Y258 94 aa12.85□□□□□ -0.35
TGFBR3-204ENST00000465892 KLF2Q9Y5W3 355 aaPredicted RBP12.85□□□□□ -0.35
TGFBR3-204ENST00000465892 MTCL1Q9Y4B5 1905 aaKnown RBP12.85□□□□□ -0.35
TGFBR3-204ENST00000465892 TMEM272A0A1B0GTI8 110 aa12.85□□□□□ -0.35
TGFBR3-204ENST00000465892 A0A1W2PR48 441 aa12.85□□□□□ -0.35
TGFBR3-204ENST00000465892 ANKRD20A5PA0PJZ0 165 aa12.85□□□□□ -0.35
TGFBR3-204ENST00000465892 KCNAB3O43448 404 aa12.85□□□□□ -0.35
TGFBR3-204ENST00000465892 NDUFB6O95139 128 aa12.85□□□□□ -0.35
TGFBR3-204ENST00000465892 CALCRP30988 508 aa12.85□□□□□ -0.35
TGFBR3-204ENST00000465892 LUMP51884 338 aaPredicted RBP12.85□□□□□ -0.35
TGFBR3-204ENST00000465892 ELAVL2Q12926 359 aaKnown RBP12.85□□□□□ -0.35
TGFBR3-204ENST00000465892 TRAM1Q15629 374 aa12.85□□□□□ -0.35
TGFBR3-204ENST00000465892 NAXDQ8IW45 347 aa12.85□□□□□ -0.35
TGFBR3-204ENST00000465892 PUSL1Q8N0Z8 303 aaKnown RBP12.85□□□□□ -0.35
TGFBR3-204ENST00000465892 PCSK9Q8NBP7 692 aaKnown RBP12.85□□□□□ -0.35
TGFBR3-204ENST00000465892 SDR9C7Q8NEX9 313 aa12.85□□□□□ -0.35
TGFBR3-204ENST00000465892 OR2AK2Q8NG84 335 aa12.85□□□□□ -0.35
TGFBR3-204ENST00000465892 S100A16Q96FQ6 103 aaKnown RBP12.85□□□□□ -0.35
TGFBR3-204ENST00000465892 JAM3Q9BX67 310 aa12.85□□□□□ -0.35
TGFBR3-204ENST00000465892 TSPAN10Q9H1Z9 355 aaPredicted RBP12.85□□□□□ -0.35
TGFBR3-204ENST00000465892 SPG21Q9NZD8 308 aa12.85□□□□□ -0.35
TGFBR3-204ENST00000465892 TRAV1-2A0A0B4J238 106 aa12.85□□□□□ -0.35
TGFBR3-204ENST00000465892 TRAV20A0A0B4J274 112 aa12.85□□□□□ -0.35
TGFBR3-204ENST00000465892 IFITM5A6NNB3 132 aa12.85□□□□□ -0.35
TGFBR3-204ENST00000465892 LINC00587B1AMM8 73 aa12.85□□□□□ -0.35
TGFBR3-204ENST00000465892 KPNA3O00505 521 aaPredicted RBP12.85□□□□□ -0.35
TGFBR3-204ENST00000465892 GNB5O14775 395 aa12.85□□□□□ -0.35
TGFBR3-204ENST00000465892 CTDSPLO15194 276 aa12.85□□□□□ -0.35
TGFBR3-204ENST00000465892 RASGRP1O95267 797 aa12.85□□□□□ -0.35
TGFBR3-204ENST00000465892 CYBAP13498 195 aa12.85□□□□□ -0.35
TGFBR3-204ENST00000465892 MPIP34949 423 aa12.85□□□□□ -0.35
TGFBR3-204ENST00000465892 SOX2P48431 317 aa12.85□□□□□ -0.35
TGFBR3-204ENST00000465892 UBE2IP63279 158 aaKnown RBP12.85□□□□□ -0.35
TGFBR3-204ENST00000465892 FKBP1BP68106 108 aa12.85□□□□□ -0.35
TGFBR3-204ENST00000465892 OR4K13Q8NH42 304 aa12.85□□□□□ -0.35
TGFBR3-204ENST00000465892 GRHL3Q8TE85 626 aa12.85□□□□□ -0.35
TGFBR3-204ENST00000465892 DUSP19Q8WTR2 217 aa12.85□□□□□ -0.35
TGFBR3-204ENST00000465892 CDS1Q92903 461 aa12.85□□□□□ -0.35
TGFBR3-204ENST00000465892 GAL3ST1Q99999 423 aa12.85□□□□□ -0.35
TGFBR3-204ENST00000465892 XKR8Q9H6D3 395 aa12.85□□□□□ -0.35
TGFBR3-204ENST00000465892 NRIP3Q9NQ35 241 aa12.85□□□□□ -0.35
TGFBR3-204ENST00000465892 MRPL17Q9NRX2 175 aaKnown RBP12.85□□□□□ -0.35
TGFBR3-204ENST00000465892 SLC22A11Q9NSA0 550 aa12.85□□□□□ -0.35
TGFBR3-204ENST00000465892 CLDND1Q9NY35 253 aa12.85□□□□□ -0.35
TGFBR3-204ENST00000465892 COA4Q9NYJ1 87 aa12.85□□□□□ -0.35
TGFBR3-204ENST00000465892 AKAP7Q9P0M2 348 aaPredicted RBP12.85□□□□□ -0.35
TGFBR3-204ENST00000465892 HMSDA8MTL9 139 aa12.84□□□□□ -0.35
TGFBR3-204ENST00000465892 FAM171A2A8MVW0 826 aa12.84□□□□□ -0.35
TGFBR3-204ENST00000465892 ERI3O43414 337 aaKnown RBP12.84□□□□□ -0.35
TGFBR3-204ENST00000465892 SERPINA3P01011 423 aa12.84□□□□□ -0.35
TGFBR3-204ENST00000465892 F3P13726 295 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms