RNA–Protein interactions for RNA: ENST00000465514.1

USP39-212, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 660 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-212ENST00000465514 E7EQL1 145 aa8.53□□□□□ -1.04
USP39-212ENST00000465514 GOLGA8NF8WBI6 632 aa8.53□□□□□ -1.04
USP39-212ENST00000465514 STX11O75558 287 aa8.53□□□□□ -1.04
USP39-212ENST00000465514 RAD51DO75771 328 aa8.53□□□□□ -1.04
USP39-212ENST00000465514 UGT2B17O75795 530 aa8.53□□□□□ -1.04
USP39-212ENST00000465514 ALX3O95076 343 aa8.53□□□□□ -1.04
USP39-212ENST00000465514 AK1P00568 194 aa8.53□□□□□ -1.04
USP39-212ENST00000465514 IGHV3-9P01782 118 aa8.53□□□□□ -1.04
USP39-212ENST00000465514 UBTFL6P0CB48 400 aaPredicted RBP8.53□□□□□ -1.04
USP39-212ENST00000465514 TFPIP10646 304 aa8.53□□□□□ -1.04
USP39-212ENST00000465514 PGCP20142 388 aa8.53□□□□□ -1.04
USP39-212ENST00000465514 TTKP33981 857 aa8.53□□□□□ -1.04
USP39-212ENST00000465514 SERPINB5P36952 375 aa8.53□□□□□ -1.04
USP39-212ENST00000465514 EFNA4P52798 201 aa8.53□□□□□ -1.04
USP39-212ENST00000465514 CLDN8P56748 225 aa8.53□□□□□ -1.04
USP39-212ENST00000465514 CSNK2A1P68400 391 aaPredicted RBP8.53□□□□□ -1.04
USP39-212ENST00000465514 PDK3Q15120 406 aa8.53□□□□□ -1.04
USP39-212ENST00000465514 MAPK14Q16539 360 aa8.53□□□□□ -1.04
USP39-212ENST00000465514 SYT14P1Q58G82 188 aa8.53□□□□□ -1.04
USP39-212ENST00000465514 FBXW9Q5XUX1 488 aa8.53□□□□□ -1.04
USP39-212ENST00000465514 ABLIM2Q6H8Q1 611 aa8.53□□□□□ -1.04
USP39-212ENST00000465514 OR4F3Q6IEY1 312 aa8.53□□□□□ -1.04
USP39-212ENST00000465514 EIF3MQ7L2H7 374 aaKnown RBP8.53□□□□□ -1.04
USP39-212ENST00000465514 SSX8Q7RTT4 187 aa8.53□□□□□ -1.04
USP39-212ENST00000465514 C16orf62Q7Z3J2 963 aa8.53□□□□□ -1.04
USP39-212ENST00000465514 MTDHQ86UE4 582 aaKnown RBP8.53□□□□□ -1.04
USP39-212ENST00000465514 CLECL1Q8IZS7 167 aa8.53□□□□□ -1.04
USP39-212ENST00000465514 UBE2J2Q8N2K1 259 aa8.53□□□□□ -1.04
USP39-212ENST00000465514 OR52N5Q8NH56 324 aa8.53□□□□□ -1.04
USP39-212ENST00000465514 TCP10LQ8TDR4 215 aa8.53□□□□□ -1.04
USP39-212ENST00000465514 TMEM234Q8WY98 164 aa8.53□□□□□ -1.04
USP39-212ENST00000465514 TUBGCP3Q96CW5 907 aa8.53□□□□□ -1.04
USP39-212ENST00000465514 RADILQ96JH8 1075 aa8.53□□□□□ -1.04
USP39-212ENST00000465514 SLC35G5Q96KT7 338 aa8.53□□□□□ -1.04
USP39-212ENST00000465514 ZNF747Q9BV97 191 aa8.53□□□□□ -1.04
USP39-212ENST00000465514 METTL17Q9H7H0 456 aaPredicted RBP8.53□□□□□ -1.04
USP39-212ENST00000465514 CTPS2Q9NRF8 586 aa8.53□□□□□ -1.04
USP39-212ENST00000465514 EMC3Q9P0I2 261 aa8.53□□□□□ -1.04
USP39-212ENST00000465514 NOSIPQ9Y314 301 aaKnown RBP8.53□□□□□ -1.04
USP39-212ENST00000465514 IGKV3D-15A0A087WSY6 115 aa8.52□□□□□ -1.05
USP39-212ENST00000465514 RNF103-CHMP3A0A140T963 221 aa8.52□□□□□ -1.05
USP39-212ENST00000465514 A0A1W2PR80 420 aa8.52□□□□□ -1.05
USP39-212ENST00000465514 CIB4A0PJX0 185 aa8.52□□□□□ -1.05
USP39-212ENST00000465514 ZNF716A6NP11 495 aa8.52□□□□□ -1.05
USP39-212ENST00000465514 BCAS1O75363 584 aaPredicted RBP8.52□□□□□ -1.05
USP39-212ENST00000465514 ZNF23P17027 643 aa8.52□□□□□ -1.05
USP39-212ENST00000465514 NTF4P34130 210 aa8.52□□□□□ -1.05
USP39-212ENST00000465514 PGM1P36871 562 aa8.52□□□□□ -1.05
USP39-212ENST00000465514 APOBEC1P41238 236 aaKnown RBP8.52□□□□□ -1.05
USP39-212ENST00000465514 PDLIM4P50479 330 aa8.52□□□□□ -1.05
USP39-212ENST00000465514 ZNF83P51522 516 aa8.52□□□□□ -1.05
USP39-212ENST00000465514 EMX2Q04743 252 aa8.52□□□□□ -1.05
USP39-212ENST00000465514 CHRNEQ04844 493 aa8.52□□□□□ -1.05
USP39-212ENST00000465514 LGALS3BPQ08380 585 aa8.52□□□□□ -1.05
USP39-212ENST00000465514 SPOCK1Q08629 439 aa8.52□□□□□ -1.05
USP39-212ENST00000465514 IQCCQ4KMZ1 466 aa8.52□□□□□ -1.05
USP39-212ENST00000465514 SLC22A25Q6T423 547 aa8.52□□□□□ -1.05
USP39-212ENST00000465514 KLHL17Q6TDP4 642 aa8.52□□□□□ -1.05
USP39-212ENST00000465514 SHISA2Q6UWI4 295 aa8.52□□□□□ -1.05
USP39-212ENST00000465514 TMEM108Q6UXF1 575 aa8.52□□□□□ -1.05
USP39-212ENST00000465514 PEG10Q86TG7 708 aaKnown RBP8.52□□□□□ -1.05
USP39-212ENST00000465514 MUC15Q8N387 334 aa8.52□□□□□ -1.05
USP39-212ENST00000465514 OR4A15Q8NGL6 344 aa8.52□□□□□ -1.05
USP39-212ENST00000465514 ZNF563Q8TA94 476 aa8.52□□□□□ -1.05
USP39-212ENST00000465514 SLC25A43Q8WUT9 341 aaPredicted RBP8.52□□□□□ -1.05
USP39-212ENST00000465514 XAGE5Q8WWM1 108 aa8.52□□□□□ -1.05
USP39-212ENST00000465514 APH1AQ96BI3 265 aa8.52□□□□□ -1.05
USP39-212ENST00000465514 DNAJA3Q96EY1 480 aa8.52□□□□□ -1.05
USP39-212ENST00000465514 ARL5BQ96KC2 179 aa8.52□□□□□ -1.05
USP39-212ENST00000465514 DHRS9Q9BPW9 319 aa8.52□□□□□ -1.05
USP39-212ENST00000465514 CCDC106Q9BWC9 280 aa8.52□□□□□ -1.05
USP39-212ENST00000465514 ZNF350Q9GZX5 532 aa8.52□□□□□ -1.05
USP39-212ENST00000465514 OR51I1Q9H343 314 aa8.52□□□□□ -1.05
USP39-212ENST00000465514 EXD2Q9NVH0 621 aa8.52□□□□□ -1.05
USP39-212ENST00000465514 NOP53Q9NZM5 478 aaKnown RBP8.52□□□□□ -1.05
USP39-212ENST00000465514 MGAT4BQ9UQ53 548 aa8.52□□□□□ -1.05
USP39-212ENST00000465514 SLC25A15Q9Y619 301 aa8.52□□□□□ -1.05
USP39-212ENST00000465514 TRIM77I1YAP6 450 aa8.51□□□□□ -1.05
USP39-212ENST00000465514 NDUFS8O00217 210 aa8.51□□□□□ -1.05
USP39-212ENST00000465514 RNASET2O00584 256 aaKnown RBP8.51□□□□□ -1.05
USP39-212ENST00000465514 GPR171O14626 319 aa8.51□□□□□ -1.05
USP39-212ENST00000465514 ANKRD28O15084 1053 aa8.51□□□□□ -1.05
USP39-212ENST00000465514 CPSF4O95639 269 aaKnown RBP8.51□□□□□ -1.05
USP39-212ENST00000465514 PMS2P2O95744 297 aa8.51□□□□□ -1.05
USP39-212ENST00000465514 BPGMP07738 259 aa8.51□□□□□ -1.05
USP39-212ENST00000465514 OR12D1P0DN82 309 aa8.51□□□□□ -1.05
USP39-212ENST00000465514 PTAFRP25105 342 aa8.51□□□□□ -1.05
USP39-212ENST00000465514 CD40P25942 277 aa8.51□□□□□ -1.05
USP39-212ENST00000465514 RYKP34925 604 aa8.51□□□□□ -1.05
USP39-212ENST00000465514 FABP6P51161 128 aa8.51□□□□□ -1.05
USP39-212ENST00000465514 FOXG1P55316 489 aaPredicted RBP8.51□□□□□ -1.05
USP39-212ENST00000465514 MAD2L1Q13257 205 aaPredicted RBP8.51□□□□□ -1.05
USP39-212ENST00000465514 CARTPTQ16568 116 aa8.51□□□□□ -1.05
USP39-212ENST00000465514 ATAD3BQ5T9A4 648 aa8.51□□□□□ -1.05
USP39-212ENST00000465514 TYW3Q6IPR3 259 aaKnown RBP8.51□□□□□ -1.05
USP39-212ENST00000465514 TNFAIP8L2Q6P589 184 aaPredicted RBP8.51□□□□□ -1.05
USP39-212ENST00000465514 HMGN2P46Q86SG4 172 aa8.51□□□□□ -1.05
USP39-212ENST00000465514 ADGRG3Q86Y34 549 aa8.51□□□□□ -1.05
USP39-212ENST00000465514 CCDC103Q8IW40 242 aa8.51□□□□□ -1.05
USP39-212ENST00000465514 FBXL14Q8N1E6 418 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms