RNA–Protein interactions for RNA: ENST00000464800.5

MCF2L-220, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 2

Gene MCF2L, Length 720 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-220ENST00000464800 BPESC1Q9GZL8 116 aa12.76□□□□□ -0.37
MCF2L-220ENST00000464800 ZNF350Q9GZX5 532 aa12.76□□□□□ -0.37
MCF2L-220ENST00000464800 SLC7A10Q9NS82 523 aa12.76□□□□□ -0.37
MCF2L-220ENST00000464800 PARPBPQ9NWS1 579 aa12.76□□□□□ -0.37
MCF2L-220ENST00000464800 MKLN1Q9UL63 735 aa12.76□□□□□ -0.37
MCF2L-220ENST00000464800 TMEM233B4DJY2 109 aa12.75□□□□□ -0.37
MCF2L-220ENST00000464800 PIP5K1BO14986 540 aa12.75□□□□□ -0.37
MCF2L-220ENST00000464800 FCMRO60667 390 aa12.75□□□□□ -0.37
MCF2L-220ENST00000464800 LYPLA1O75608 230 aaPredicted RBP12.75□□□□□ -0.37
MCF2L-220ENST00000464800 FGF4P08620 206 aa12.75□□□□□ -0.37
MCF2L-220ENST00000464800 ITGA2P17301 1181 aa12.75□□□□□ -0.37
MCF2L-220ENST00000464800 MATN1P21941 496 aa12.75□□□□□ -0.37
MCF2L-220ENST00000464800 MPGP29372 298 aa12.75□□□□□ -0.37
MCF2L-220ENST00000464800 RYKP34925 604 aa12.75□□□□□ -0.37
MCF2L-220ENST00000464800 PGM1P36871 562 aa12.75□□□□□ -0.37
MCF2L-220ENST00000464800 SERPINF1P36955 418 aa12.75□□□□□ -0.37
MCF2L-220ENST00000464800 SRP14P37108 136 aaKnown RBP12.75□□□□□ -0.37
MCF2L-220ENST00000464800 CLK1P49759 484 aaKnown RBP12.75□□□□□ -0.37
MCF2L-220ENST00000464800 ARHGAP11BQ3KRB8 267 aa12.75□□□□□ -0.37
MCF2L-220ENST00000464800 UGT3A2Q3SY77 523 aa12.75□□□□□ -0.37
MCF2L-220ENST00000464800 TSPO2Q5TGU0 170 aa12.75□□□□□ -0.37
MCF2L-220ENST00000464800 OLIG3Q7RTU3 272 aa12.75□□□□□ -0.37
MCF2L-220ENST00000464800 EPS8L3Q8TE67 593 aaKnown RBP12.75□□□□□ -0.37
MCF2L-220ENST00000464800 UBLCP1Q8WVY7 318 aaPredicted RBP12.75□□□□□ -0.37
MCF2L-220ENST00000464800 OIT3Q8WWZ8 545 aa12.75□□□□□ -0.37
MCF2L-220ENST00000464800 COQ8BQ96D53 544 aa12.75□□□□□ -0.37
MCF2L-220ENST00000464800 C1orf159Q96HA4 380 aa12.75□□□□□ -0.37
MCF2L-220ENST00000464800 SLC35G5Q96KT7 338 aa12.75□□□□□ -0.37
MCF2L-220ENST00000464800 SOX7Q9BT81 388 aa12.75□□□□□ -0.37
MCF2L-220ENST00000464800 C1orf50Q9BV19 199 aa12.75□□□□□ -0.37
MCF2L-220ENST00000464800 BHLHE41Q9C0J9 482 aaPredicted RBP12.75□□□□□ -0.37
MCF2L-220ENST00000464800 SERHL2Q9H4I8 314 aa12.75□□□□□ -0.37
MCF2L-220ENST00000464800 PPCSQ9HAB8 311 aa12.75□□□□□ -0.37
MCF2L-220ENST00000464800 TMEM181Q9P2C4 612 aa12.75□□□□□ -0.37
MCF2L-220ENST00000464800 GIMAP2Q9UG22 337 aa12.75□□□□□ -0.37
MCF2L-220ENST00000464800 MID2Q9UJV3 735 aa12.75□□□□□ -0.37
MCF2L-220ENST00000464800 SLC35A3Q9Y2D2 325 aa12.75□□□□□ -0.37
MCF2L-220ENST00000464800 FLVCR1Q9Y5Y0 555 aa12.75□□□□□ -0.37
MCF2L-220ENST00000464800 WIPF1O43516 503 aa12.74□□□□□ -0.37
MCF2L-220ENST00000464800 EIF1BO60739 113 aaKnown RBP12.74□□□□□ -0.37
MCF2L-220ENST00000464800 PEX11AO75192 247 aa12.74□□□□□ -0.37
MCF2L-220ENST00000464800 CHRNGP07510 517 aa12.74□□□□□ -0.37
MCF2L-220ENST00000464800 PRPS1L1P21108 318 aa12.74□□□□□ -0.37
MCF2L-220ENST00000464800 HBA1P69905 142 aa12.74□□□□□ -0.37
MCF2L-220ENST00000464800 SLC35A1P78382 337 aa12.74□□□□□ -0.37
MCF2L-220ENST00000464800 H3F3AP84243 136 aa12.74□□□□□ -0.37
MCF2L-220ENST00000464800 ATP6AP1LQ52LC2 224 aa12.74□□□□□ -0.37
MCF2L-220ENST00000464800 C12orf54Q6X4T0 127 aa12.74□□□□□ -0.37
MCF2L-220ENST00000464800 SPATA19Q7Z5L4 167 aa12.74□□□□□ -0.37
MCF2L-220ENST00000464800 KRTCAP2Q8N6L1 136 aa12.74□□□□□ -0.37
MCF2L-220ENST00000464800 DUSP26Q9BV47 211 aa12.74□□□□□ -0.37
MCF2L-220ENST00000464800 PLA2G12AQ9BZM1 189 aa12.74□□□□□ -0.37
MCF2L-220ENST00000464800 CA10Q9NS85 328 aa12.74□□□□□ -0.37
MCF2L-220ENST00000464800 EXD2Q9NVH0 621 aa12.74□□□□□ -0.37
MCF2L-220ENST00000464800 TRAPPC4Q9Y296 219 aa12.74□□□□□ -0.37
MCF2L-220ENST00000464800 SVEP1Q4LDE5 3571 aa12.74□□□□□ -0.37
MCF2L-220ENST00000464800 RNF103-CHMP3A0A140T963 221 aa12.73□□□□□ -0.37
MCF2L-220ENST00000464800 LRP5LA4QPB2 252 aa12.73□□□□□ -0.37
MCF2L-220ENST00000464800 B9A039 149 aa12.73□□□□□ -0.37
MCF2L-220ENST00000464800 BCAS1O75363 584 aaPredicted RBP12.73□□□□□ -0.37
MCF2L-220ENST00000464800 PDE5AO76074 875 aa12.73□□□□□ -0.37
MCF2L-220ENST00000464800 CDH2P19022 906 aaPredicted RBP12.73□□□□□ -0.37
MCF2L-220ENST00000464800 CCNA2P20248 432 aa12.73□□□□□ -0.37
MCF2L-220ENST00000464800 ALDH3A1P30838 453 aa12.73□□□□□ -0.37
MCF2L-220ENST00000464800 PPOXP50336 477 aa12.73□□□□□ -0.37
MCF2L-220ENST00000464800 CHN2P52757 468 aa12.73□□□□□ -0.37
MCF2L-220ENST00000464800 MAPK14Q16539 360 aa12.73□□□□□ -0.37
MCF2L-220ENST00000464800 HIKESHIQ53FT3 197 aa12.73□□□□□ -0.37
MCF2L-220ENST00000464800 XKR7Q5GH72 579 aa12.73□□□□□ -0.37
MCF2L-220ENST00000464800 ATAD3BQ5T9A4 648 aa12.73□□□□□ -0.37
MCF2L-220ENST00000464800 EMBQ6PCB8 327 aa12.73□□□□□ -0.37
MCF2L-220ENST00000464800 C6orf120Q7Z4R8 191 aa12.73□□□□□ -0.37
MCF2L-220ENST00000464800 ADGRG3Q86Y34 549 aa12.73□□□□□ -0.37
MCF2L-220ENST00000464800 AGR3Q8TD06 166 aa12.73□□□□□ -0.37
MCF2L-220ENST00000464800 TMEM45BQ96B21 275 aa12.73□□□□□ -0.37
MCF2L-220ENST00000464800 DDIT4LQ96D03 193 aa12.73□□□□□ -0.37
MCF2L-220ENST00000464800 SLC38A2Q96QD8 506 aa12.73□□□□□ -0.37
MCF2L-220ENST00000464800 NAA11Q9BSU3 229 aaPredicted RBP12.73□□□□□ -0.37
MCF2L-220ENST00000464800 KATNB1Q9BVA0 655 aa12.73□□□□□ -0.37
MCF2L-220ENST00000464800 OBP2BQ9NPH6 170 aa12.73□□□□□ -0.37
MCF2L-220ENST00000464800 TMEFF2Q9UIK5 374 aaPredicted RBP12.73□□□□□ -0.37
MCF2L-220ENST00000464800 PCDHGB4Q9UN71 923 aa12.73□□□□□ -0.37
MCF2L-220ENST00000464800 WDR45Q9Y484 360 aa12.73□□□□□ -0.37
MCF2L-220ENST00000464800 IGHV1-18A0A0C4DH31 117 aa12.72□□□□□ -0.37
MCF2L-220ENST00000464800 KLF11O14901 512 aa12.72□□□□□ -0.37
MCF2L-220ENST00000464800 SPRY1O43609 319 aaPredicted RBP12.72□□□□□ -0.37
MCF2L-220ENST00000464800 NPHS1O60500 1241 aa12.72□□□□□ -0.37
MCF2L-220ENST00000464800 SNUPNO95149 360 aaKnown RBP12.72□□□□□ -0.37
MCF2L-220ENST00000464800 CRYAAP02489 173 aa12.72□□□□□ -0.37
MCF2L-220ENST00000464800 OR4A8P0C604 315 aa12.72□□□□□ -0.37
MCF2L-220ENST00000464800 CFPP27918 469 aa12.72□□□□□ -0.37
MCF2L-220ENST00000464800 HTR3AP46098 478 aa12.72□□□□□ -0.37
MCF2L-220ENST00000464800 SLC17A1Q14916 467 aa12.72□□□□□ -0.37
MCF2L-220ENST00000464800 EFNB3Q15768 340 aa12.72□□□□□ -0.37
MCF2L-220ENST00000464800 ADIPOQQ15848 244 aa12.72□□□□□ -0.37
MCF2L-220ENST00000464800 IL23RQ5VWK5 629 aa12.72□□□□□ -0.37
MCF2L-220ENST00000464800 TYW3Q6IPR3 259 aaKnown RBP12.72□□□□□ -0.37
MCF2L-220ENST00000464800 ABHD12BQ7Z5M8 362 aaPredicted RBP12.72□□□□□ -0.37
MCF2L-220ENST00000464800 RIMKLAQ8IXN7 391 aa12.72□□□□□ -0.37
MCF2L-220ENST00000464800 CLEC4FQ8N1N0 589 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms