RNA–Protein interactions for RNA: ENST00000463020.1

SND1-203, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 2

Gene SND1, Length 793 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-203ENST00000463020 B2RBV5 119 aa13.75□□□□□ -0.21
SND1-203ENST00000463020 TMEM233B4DJY2 109 aa13.75□□□□□ -0.21
SND1-203ENST00000463020 GSC2O15499 205 aa13.75□□□□□ -0.21
SND1-203ENST00000463020 NPHS1O60500 1241 aa13.75□□□□□ -0.21
SND1-203ENST00000463020 CIB2O75838 187 aa13.75□□□□□ -0.21
SND1-203ENST00000463020 ITGA5P08648 1049 aa13.75□□□□□ -0.21
SND1-203ENST00000463020 DIO1P49895 249 aa13.75□□□□□ -0.21
SND1-203ENST00000463020 SUMO3P55854 103 aaPredicted RBP13.75□□□□□ -0.21
SND1-203ENST00000463020 GGTLC2Q14390 218 aa13.75□□□□□ -0.21
SND1-203ENST00000463020 MST1LQ2TV78 715 aa13.75□□□□□ -0.21
SND1-203ENST00000463020 TIGD2Q4W5G0 525 aa13.75□□□□□ -0.21
SND1-203ENST00000463020 ARL13AQ5H913 290 aaPredicted RBP13.75□□□□□ -0.21
SND1-203ENST00000463020 SWT1Q5T5J6 900 aaKnown RBP13.75□□□□□ -0.21
SND1-203ENST00000463020 C9orf135Q5VTT2 229 aa13.75□□□□□ -0.21
SND1-203ENST00000463020 GALNT5Q7Z7M9 940 aa13.75□□□□□ -0.21
SND1-203ENST00000463020 ZNF100Q8IYN0 542 aa13.75□□□□□ -0.21
SND1-203ENST00000463020 FBXL14Q8N1E6 418 aa13.75□□□□□ -0.21
SND1-203ENST00000463020 TMCO5AQ8N6Q1 288 aa13.75□□□□□ -0.21
SND1-203ENST00000463020 ZNF614Q8N883 585 aa13.75□□□□□ -0.21
SND1-203ENST00000463020 ZNF527Q8NB42 609 aa13.75□□□□□ -0.21
SND1-203ENST00000463020 OR52E4Q8NGH9 312 aa13.75□□□□□ -0.21
SND1-203ENST00000463020 OR5D16Q8NGK9 328 aa13.75□□□□□ -0.21
SND1-203ENST00000463020 ZFP28Q8NHY6 868 aa13.75□□□□□ -0.21
SND1-203ENST00000463020 STON2Q8WXE9 905 aa13.75□□□□□ -0.21
SND1-203ENST00000463020 UTP4Q969X6 686 aaKnown RBP13.75□□□□□ -0.21
SND1-203ENST00000463020 STACQ99469 402 aa13.75□□□□□ -0.21
SND1-203ENST00000463020 USB1Q9BQ65 265 aaKnown RBP13.75□□□□□ -0.21
SND1-203ENST00000463020 AMBRA1Q9C0C7 1298 aa13.75□□□□□ -0.21
SND1-203ENST00000463020 NOP53Q9NZM5 478 aaKnown RBP13.75□□□□□ -0.21
SND1-203ENST00000463020 ARMCX1Q9P291 453 aa13.75□□□□□ -0.21
SND1-203ENST00000463020 LPAR3Q9UBY5 353 aa13.75□□□□□ -0.21
SND1-203ENST00000463020 FIS1Q9Y3D6 152 aa13.75□□□□□ -0.21
SND1-203ENST00000463020 LSM1O15116 133 aaKnown RBP13.74□□□□□ -0.21
SND1-203ENST00000463020 CRCPO75575 148 aa13.74□□□□□ -0.21
SND1-203ENST00000463020 LINC00032P0C843 101 aa13.74□□□□□ -0.21
SND1-203ENST00000463020 UROSP10746 265 aa13.74□□□□□ -0.21
SND1-203ENST00000463020 LAMP1P11279 417 aa13.74□□□□□ -0.21
SND1-203ENST00000463020 PRDX6P30041 224 aa13.74□□□□□ -0.21
SND1-203ENST00000463020 THBS2P35442 1172 aa13.74□□□□□ -0.21
SND1-203ENST00000463020 PGM1P36871 562 aa13.74□□□□□ -0.21
SND1-203ENST00000463020 RPL14P50914 215 aaKnown RBP13.74□□□□□ -0.21
SND1-203ENST00000463020 CCR4P51679 360 aa13.74□□□□□ -0.21
SND1-203ENST00000463020 EFNA4P52798 201 aa13.74□□□□□ -0.21
SND1-203ENST00000463020 ATP12AP54707 1039 aa13.74□□□□□ -0.21
SND1-203ENST00000463020 DNAJB13P59910 316 aa13.74□□□□□ -0.21
SND1-203ENST00000463020 RPS26P62854 115 aaKnown RBP13.74□□□□□ -0.21
SND1-203ENST00000463020 LSM11P83369 360 aaKnown RBP eCLIP13.74□□□□□ -0.21
SND1-203ENST00000463020 SKP2Q13309 424 aa13.74□□□□□ -0.21
SND1-203ENST00000463020 GABRA6Q16445 453 aa13.74□□□□□ -0.21
SND1-203ENST00000463020 PDZK1Q5T2W1 519 aa13.74□□□□□ -0.21
SND1-203ENST00000463020 FBXW9Q5XUX1 488 aa13.74□□□□□ -0.21
SND1-203ENST00000463020 ZCCHC12Q6PEW1 402 aa13.74□□□□□ -0.21
SND1-203ENST00000463020 EPGNQ6UW88 154 aa13.74□□□□□ -0.21
SND1-203ENST00000463020 TMEM108Q6UXF1 575 aa13.74□□□□□ -0.21
SND1-203ENST00000463020 RINLQ6ZS11 566 aa13.74□□□□□ -0.21
SND1-203ENST00000463020 OR5W2Q8NH69 310 aa13.74□□□□□ -0.21
SND1-203ENST00000463020 C3orf49Q96BT1 292 aa13.74□□□□□ -0.21
SND1-203ENST00000463020 CMTM5Q96DZ9 223 aa13.74□□□□□ -0.21
SND1-203ENST00000463020 SORCS2Q96PQ0 1159 aa13.74□□□□□ -0.21
SND1-203ENST00000463020 THUMPD3Q9BV44 507 aaKnown RBP13.74□□□□□ -0.21
SND1-203ENST00000463020 CADM1Q9BY67 442 aaKnown RBP13.74□□□□□ -0.21
SND1-203ENST00000463020 HHATLQ9HCP6 504 aa13.74□□□□□ -0.21
SND1-203ENST00000463020 DTNAQ9Y4J8 743 aa13.74□□□□□ -0.21
SND1-203ENST00000463020 IGKV3D-15A0A087WSY6 115 aa13.73□□□□□ -0.21
SND1-203ENST00000463020 LOC100289279A0A1B0GTE1 492 aa13.73□□□□□ -0.21
SND1-203ENST00000463020 ATP6V1G2-DDX39BF2Z307 99 aa13.73□□□□□ -0.21
SND1-203ENST00000463020 PDLIM1O00151 329 aa13.73□□□□□ -0.21
SND1-203ENST00000463020 GTPBP1O00178 669 aaKnown RBP13.73□□□□□ -0.21
SND1-203ENST00000463020 DNAJA2O60884 412 aa13.73□□□□□ -0.21
SND1-203ENST00000463020 BCKDHAP12694 445 aa13.73□□□□□ -0.21
SND1-203ENST00000463020 ATP6V1C1P21283 382 aa13.73□□□□□ -0.21
SND1-203ENST00000463020 PTAFRP25105 342 aa13.73□□□□□ -0.21
SND1-203ENST00000463020 PLAURQ03405 335 aa13.73□□□□□ -0.21
SND1-203ENST00000463020 TP53BP2Q13625 1128 aa13.73□□□□□ -0.21
SND1-203ENST00000463020 P2RY8Q86VZ1 359 aa13.73□□□□□ -0.21
SND1-203ENST00000463020 CCDC103Q8IW40 242 aa13.73□□□□□ -0.21
SND1-203ENST00000463020 CLEC4FQ8N1N0 589 aa13.73□□□□□ -0.21
SND1-203ENST00000463020 UBE2J2Q8N2K1 259 aa13.73□□□□□ -0.21
SND1-203ENST00000463020 OR5AK3PQ8NH89 298 aa13.73□□□□□ -0.21
SND1-203ENST00000463020 PROX1Q92786 737 aa13.73□□□□□ -0.21
SND1-203ENST00000463020 RADILQ96JH8 1075 aa13.73□□□□□ -0.21
SND1-203ENST00000463020 EBF4Q9BQW3 602 aa13.73□□□□□ -0.21
SND1-203ENST00000463020 INPP5KQ9BT40 448 aa13.73□□□□□ -0.21
SND1-203ENST00000463020 C1orf21Q9H246 121 aa13.73□□□□□ -0.21
SND1-203ENST00000463020 TAS2R1Q9NYW7 299 aa13.73□□□□□ -0.21
SND1-203ENST00000463020 ATP23Q9Y6H3 246 aa13.73□□□□□ -0.21
SND1-203ENST00000463020 ARFGEF3Q5TH69 2177 aa13.72□□□□□ -0.21
SND1-203ENST00000463020 SCAMP2O15127 329 aaKnown RBP13.72□□□□□ -0.21
SND1-203ENST00000463020 HDAC3O15379 428 aa13.72□□□□□ -0.21
SND1-203ENST00000463020 ZNF264O43296 627 aa13.72□□□□□ -0.21
SND1-203ENST00000463020 FCMRO60667 390 aa13.72□□□□□ -0.21
SND1-203ENST00000463020 C6orf47O95873 294 aa13.72□□□□□ -0.21
SND1-203ENST00000463020 UBL4AP11441 157 aa13.72□□□□□ -0.21
SND1-203ENST00000463020 NCF2P19878 526 aaPredicted RBP13.72□□□□□ -0.21
SND1-203ENST00000463020 NR4A2P43354 598 aa13.72□□□□□ -0.21
SND1-203ENST00000463020 SESN3P58005 492 aa13.72□□□□□ -0.21
SND1-203ENST00000463020 SWI5Q1ZZU3 235 aa13.72□□□□□ -0.21
SND1-203ENST00000463020 C3orf33Q6P1S2 294 aa13.72□□□□□ -0.21
SND1-203ENST00000463020 TMPPEQ6ZT21 453 aa13.72□□□□□ -0.21
SND1-203ENST00000463020 HMGN2P46Q86SG4 172 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms