RNA–Protein interactions for RNA: ENST00000460767.5

SCAMP4-206, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 4

Gene SCAMP4, Length 569 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-206ENST00000460767 SONP18583 2426 aaKnown RBP12.16□□□□□ -0.46
SCAMP4-206ENST00000460767 FREM1Q5H8C1 2179 aa12.15□□□□□ -0.46
SCAMP4-206ENST00000460767 SLC22A20A6NK97 555 aa12.15□□□□□ -0.46
SCAMP4-206ENST00000460767 BBIP1A8MTZ0 92 aa12.15□□□□□ -0.46
SCAMP4-206ENST00000460767 C16orf97H3BN30 126 aa12.15□□□□□ -0.46
SCAMP4-206ENST00000460767 AP3D1O14617 1153 aa12.15□□□□□ -0.46
SCAMP4-206ENST00000460767 SNX3O60493 162 aa12.15□□□□□ -0.46
SCAMP4-206ENST00000460767 AQP8O94778 261 aa12.15□□□□□ -0.46
SCAMP4-206ENST00000460767 CGAP01215 116 aa12.15□□□□□ -0.46
SCAMP4-206ENST00000460767 CD8BP10966 210 aa12.15□□□□□ -0.46
SCAMP4-206ENST00000460767 POU2F1P14859 743 aa12.15□□□□□ -0.46
SCAMP4-206ENST00000460767 PPP3CBP16298 524 aa12.15□□□□□ -0.46
SCAMP4-206ENST00000460767 KIR2DL2P43627 348 aaPredicted RBP12.15□□□□□ -0.46
SCAMP4-206ENST00000460767 SLC6A8P48029 635 aa12.15□□□□□ -0.46
SCAMP4-206ENST00000460767 CRYBA2P53672 197 aa12.15□□□□□ -0.46
SCAMP4-206ENST00000460767 NR1H2P55055 460 aa12.15□□□□□ -0.46
SCAMP4-206ENST00000460767 ATP5J2P56134 94 aa12.15□□□□□ -0.46
SCAMP4-206ENST00000460767 RBBP4Q09028 425 aa12.15□□□□□ -0.46
SCAMP4-206ENST00000460767 EPS8Q12929 822 aa12.15□□□□□ -0.46
SCAMP4-206ENST00000460767 SELENBP1Q13228 472 aa12.15□□□□□ -0.46
SCAMP4-206ENST00000460767 GNA13Q14344 377 aa12.15□□□□□ -0.46
SCAMP4-206ENST00000460767 LIN52Q52LA3 116 aa12.15□□□□□ -0.46
SCAMP4-206ENST00000460767 BEX5Q5H9J7 111 aa12.15□□□□□ -0.46
SCAMP4-206ENST00000460767 GCNT6Q5T4J0 391 aa12.15□□□□□ -0.46
SCAMP4-206ENST00000460767 NANOGP8Q6NSW7 305 aa12.15□□□□□ -0.46
SCAMP4-206ENST00000460767 C8orf82Q6P1X6 216 aaPredicted RBP12.15□□□□□ -0.46
SCAMP4-206ENST00000460767 SERPINA11Q86U17 422 aa12.15□□□□□ -0.46
SCAMP4-206ENST00000460767 CALHM3Q86XJ0 350 aa12.15□□□□□ -0.46
SCAMP4-206ENST00000460767 TREML1Q86YW5 311 aa12.15□□□□□ -0.46
SCAMP4-206ENST00000460767 PEX5LQ8IYB4 626 aa12.15□□□□□ -0.46
SCAMP4-206ENST00000460767 UBQLNLQ8IYU4 475 aa12.15□□□□□ -0.46
SCAMP4-206ENST00000460767 CLIP4Q8N3C7 705 aa12.15□□□□□ -0.46
SCAMP4-206ENST00000460767 OR2V1Q8NHB1 315 aa12.15□□□□□ -0.46
SCAMP4-206ENST00000460767 FNDC9Q8TBE3 224 aa12.15□□□□□ -0.46
SCAMP4-206ENST00000460767 SLC39A3Q9BRY0 314 aa12.15□□□□□ -0.46
SCAMP4-206ENST00000460767 TMEM204Q9BSN7 226 aa12.15□□□□□ -0.46
SCAMP4-206ENST00000460767 SPATA9Q9BWV2 254 aa12.15□□□□□ -0.46
SCAMP4-206ENST00000460767 NANOGQ9H9S0 305 aa12.15□□□□□ -0.46
SCAMP4-206ENST00000460767 PAQR5Q9NXK6 330 aaPredicted RBP12.15□□□□□ -0.46
SCAMP4-206ENST00000460767 PHF1O43189 567 aaPredicted RBP12.14□□□□□ -0.47
SCAMP4-206ENST00000460767 SEC14L5O43304 696 aa12.14□□□□□ -0.47
SCAMP4-206ENST00000460767 FZD7O75084 574 aa12.14□□□□□ -0.47
SCAMP4-206ENST00000460767 PABPC4LP0CB38 370 aaKnown RBP12.14□□□□□ -0.47
SCAMP4-206ENST00000460767 IL7RP16871 459 aa12.14□□□□□ -0.47
SCAMP4-206ENST00000460767 PRKAR1BP31321 381 aa12.14□□□□□ -0.47
SCAMP4-206ENST00000460767 APOBEC1P41238 236 aaKnown RBP12.14□□□□□ -0.47
SCAMP4-206ENST00000460767 GYS2P54840 703 aa12.14□□□□□ -0.47
SCAMP4-206ENST00000460767 MTPNP58546 118 aa12.14□□□□□ -0.47
SCAMP4-206ENST00000460767 CDK6Q00534 326 aa12.14□□□□□ -0.47
SCAMP4-206ENST00000460767 PON3Q15166 354 aa12.14□□□□□ -0.47
SCAMP4-206ENST00000460767 CHRFAM7AQ494W8 412 aa12.14□□□□□ -0.47
SCAMP4-206ENST00000460767 REP15Q6BDI9 236 aa12.14□□□□□ -0.47
SCAMP4-206ENST00000460767 REEP3Q6NUK4 255 aa12.14□□□□□ -0.47
SCAMP4-206ENST00000460767 DHRS4L2Q6PKH6 230 aa12.14□□□□□ -0.47
SCAMP4-206ENST00000460767 GRINAQ7Z429 371 aa12.14□□□□□ -0.47
SCAMP4-206ENST00000460767 ADGRG3Q86Y34 549 aa12.14□□□□□ -0.47
SCAMP4-206ENST00000460767 OR8J3Q8NGG0 315 aa12.14□□□□□ -0.47
SCAMP4-206ENST00000460767 TMEM234Q8WY98 164 aa12.14□□□□□ -0.47
SCAMP4-206ENST00000460767 LRRC58Q96CX6 371 aa12.14□□□□□ -0.47
SCAMP4-206ENST00000460767 PINK1Q9BXM7 581 aa12.14□□□□□ -0.47
SCAMP4-206ENST00000460767 SRXN1Q9BYN0 137 aa12.14□□□□□ -0.47
SCAMP4-206ENST00000460767 TMEM185BQ9H7F4 350 aa12.14□□□□□ -0.47
SCAMP4-206ENST00000460767 ARMCX1Q9P291 453 aa12.14□□□□□ -0.47
SCAMP4-206ENST00000460767 STOML1Q9UBI4 398 aa12.14□□□□□ -0.47
SCAMP4-206ENST00000460767 ING1Q9UK53 422 aaPredicted RBP12.14□□□□□ -0.47
SCAMP4-206ENST00000460767 IFT52Q9Y366 437 aa12.14□□□□□ -0.47
SCAMP4-206ENST00000460767 ANK3Q12955 4377 aaKnown RBP12.13□□□□□ -0.47
SCAMP4-206ENST00000460767 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP12.13□□□□□ -0.47
SCAMP4-206ENST00000460767 CFAP73A6NFT4 308 aa12.13□□□□□ -0.47
SCAMP4-206ENST00000460767 EVPLLA8MZ36 301 aa12.13□□□□□ -0.47
SCAMP4-206ENST00000460767 OVOL3O00110 214 aa12.13□□□□□ -0.47
SCAMP4-206ENST00000460767 EIF1AYO14602 144 aaKnown RBP12.13□□□□□ -0.47
SCAMP4-206ENST00000460767 TNFSF11O14788 317 aa12.13□□□□□ -0.47
SCAMP4-206ENST00000460767 HS3ST1O14792 307 aa12.13□□□□□ -0.47
SCAMP4-206ENST00000460767 SS18L1O75177 396 aaPredicted RBP12.13□□□□□ -0.47
SCAMP4-206ENST00000460767 SMNDC1O75940 238 aaKnown RBP eCLIP12.13□□□□□ -0.47
SCAMP4-206ENST00000460767 MFN2O95140 757 aa12.13□□□□□ -0.47
SCAMP4-206ENST00000460767 NUDT14O95848 222 aa12.13□□□□□ -0.47
SCAMP4-206ENST00000460767 TP53P04637 393 aaPredicted RBP12.13□□□□□ -0.47
SCAMP4-206ENST00000460767 FAM157CP0CG43 387 aa12.13□□□□□ -0.47
SCAMP4-206ENST00000460767 PRG2P13727 222 aa12.13□□□□□ -0.47
SCAMP4-206ENST00000460767 THBS2P35442 1172 aa12.13□□□□□ -0.47
SCAMP4-206ENST00000460767 SLC1A3P43003 542 aa12.13□□□□□ -0.47
SCAMP4-206ENST00000460767 CCR4P51679 360 aa12.13□□□□□ -0.47
SCAMP4-206ENST00000460767 RPS3AP61247 264 aaKnown RBP12.13□□□□□ -0.47
SCAMP4-206ENST00000460767 SF3A3Q12874 501 aaKnown RBP eCLIP12.13□□□□□ -0.47
SCAMP4-206ENST00000460767 NFYCQ13952 458 aa12.13□□□□□ -0.47
SCAMP4-206ENST00000460767 ZNF239Q16600 458 aaKnown RBP12.13□□□□□ -0.47
SCAMP4-206ENST00000460767 CLEC12BQ2HXU8 276 aa12.13□□□□□ -0.47
SCAMP4-206ENST00000460767 C3orf33Q6P1S2 294 aa12.13□□□□□ -0.47
SCAMP4-206ENST00000460767 VWA1Q6PCB0 445 aa12.13□□□□□ -0.47
SCAMP4-206ENST00000460767 ZNF704Q6ZNC4 412 aaPredicted RBP12.13□□□□□ -0.47
SCAMP4-206ENST00000460767 DNM1P46Q6ZS02 220 aa12.13□□□□□ -0.47
SCAMP4-206ENST00000460767 SPATA21Q7Z572 469 aa12.13□□□□□ -0.47
SCAMP4-206ENST00000460767 PIGWQ7Z7B1 504 aa12.13□□□□□ -0.47
SCAMP4-206ENST00000460767 SNX32Q86XE0 403 aa12.13□□□□□ -0.47
SCAMP4-206ENST00000460767 ZNF440Q8IYI8 595 aa12.13□□□□□ -0.47
SCAMP4-206ENST00000460767 TMCO5AQ8N6Q1 288 aa12.13□□□□□ -0.47
SCAMP4-206ENST00000460767 NFKBIDQ8NI38 313 aa12.13□□□□□ -0.47
SCAMP4-206ENST00000460767 RNF128Q8TEB7 428 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 155.7 ms