RNA–Protein interactions for RNA: ENST00000458550.5

PRRC2B-207, Transcript of proline rich coiled-coil 2B, humanhuman

TSL 1 (best) BASIC

Gene PRRC2B, Length 899 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRRC2B-207ENST00000458550 CD40P25942 277 aa11.92□□□□□ -0.5
PRRC2B-207ENST00000458550 TTKP33981 857 aa11.92□□□□□ -0.5
PRRC2B-207ENST00000458550 FABP6P51161 128 aa11.92□□□□□ -0.5
PRRC2B-207ENST00000458550 POLR2HP52434 150 aaKnown RBP11.92□□□□□ -0.5
PRRC2B-207ENST00000458550 NUDT6P53370 316 aa11.92□□□□□ -0.5
PRRC2B-207ENST00000458550 NME5P56597 212 aa11.92□□□□□ -0.5
PRRC2B-207ENST00000458550 DSCR9P59020 149 aa11.92□□□□□ -0.5
PRRC2B-207ENST00000458550 PHC1P78364 1004 aa11.92□□□□□ -0.5
PRRC2B-207ENST00000458550 KRTAP1-1Q07627 177 aa11.92□□□□□ -0.5
PRRC2B-207ENST00000458550 STX3Q13277 289 aa11.92□□□□□ -0.5
PRRC2B-207ENST00000458550 RAB35Q15286 201 aa11.92□□□□□ -0.5
PRRC2B-207ENST00000458550 FAM174BQ3ZCQ3 159 aa11.92□□□□□ -0.5
PRRC2B-207ENST00000458550 SPANXN4Q5MJ08 99 aa11.92□□□□□ -0.5
PRRC2B-207ENST00000458550 HMBOX1Q6NT76 420 aa11.92□□□□□ -0.5
PRRC2B-207ENST00000458550 CLEC2AQ6UVW9 174 aa11.92□□□□□ -0.5
PRRC2B-207ENST00000458550 CASP12Q6UXS9 341 aa11.92□□□□□ -0.5
PRRC2B-207ENST00000458550 CXXC5Q7LFL8 322 aaKnown RBP11.92□□□□□ -0.5
PRRC2B-207ENST00000458550 RNF130Q86XS8 419 aa11.92□□□□□ -0.5
PRRC2B-207ENST00000458550 CMIPQ8IY22 773 aa11.92□□□□□ -0.5
PRRC2B-207ENST00000458550 SPATA3Q8NHX4 192 aa11.92□□□□□ -0.5
PRRC2B-207ENST00000458550 PANX1Q96RD7 426 aa11.92□□□□□ -0.5
PRRC2B-207ENST00000458550 C1QTNF6Q9BXI9 259 aa11.92□□□□□ -0.5
PRRC2B-207ENST00000458550 CACNG6Q9BXT2 260 aa11.92□□□□□ -0.5
PRRC2B-207ENST00000458550 NUF2Q9BZD4 464 aa11.92□□□□□ -0.5
PRRC2B-207ENST00000458550 CENPHQ9H3R5 247 aa11.92□□□□□ -0.5
PRRC2B-207ENST00000458550 MTHFD2LQ9H903 347 aaPredicted RBP11.92□□□□□ -0.5
PRRC2B-207ENST00000458550 KCNK9Q9NPC2 374 aa11.92□□□□□ -0.5
PRRC2B-207ENST00000458550 CBLN4Q9NTU7 201 aa11.92□□□□□ -0.5
PRRC2B-207ENST00000458550 STAB1Q9NY15 2570 aa11.92□□□□□ -0.5
PRRC2B-207ENST00000458550 ANK3Q12955 4377 aaKnown RBP11.91□□□□□ -0.5
PRRC2B-207ENST00000458550 GOLGA8QA0A0J9YX86 632 aa11.91□□□□□ -0.5
PRRC2B-207ENST00000458550 GOLGA8OA6NCC3 632 aa11.91□□□□□ -0.5
PRRC2B-207ENST00000458550 CCDC154A6NI56 674 aa11.91□□□□□ -0.5
PRRC2B-207ENST00000458550 CLDN24A6NM45 220 aa11.91□□□□□ -0.5
PRRC2B-207ENST00000458550 E7EQL1 145 aa11.91□□□□□ -0.5
PRRC2B-207ENST00000458550 E9PBE3 544 aa11.91□□□□□ -0.5
PRRC2B-207ENST00000458550 GOLGA8NF8WBI6 632 aa11.91□□□□□ -0.5
PRRC2B-207ENST00000458550 HMGN4O00479 90 aa11.91□□□□□ -0.5
PRRC2B-207ENST00000458550 TM9SF1O15321 606 aa11.91□□□□□ -0.5
PRRC2B-207ENST00000458550 ZNF208O43345 1280 aa11.91□□□□□ -0.5
PRRC2B-207ENST00000458550 BCAS1O75363 584 aaPredicted RBP11.91□□□□□ -0.5
PRRC2B-207ENST00000458550 NR2F1P10589 423 aa11.91□□□□□ -0.5
PRRC2B-207ENST00000458550 BMP4P12644 408 aa11.91□□□□□ -0.5
PRRC2B-207ENST00000458550 IL7RP16871 459 aa11.91□□□□□ -0.5
PRRC2B-207ENST00000458550 BGNP21810 368 aa11.91□□□□□ -0.5
PRRC2B-207ENST00000458550 SLC16A1P53985 500 aa11.91□□□□□ -0.5
PRRC2B-207ENST00000458550 TXNL4AP83876 142 aaKnown RBP11.91□□□□□ -0.5
PRRC2B-207ENST00000458550 TGFBR3Q03167 851 aa11.91□□□□□ -0.5
PRRC2B-207ENST00000458550 FUT5Q11128 374 aa11.91□□□□□ -0.5
PRRC2B-207ENST00000458550 AP1ARQ63HQ0 302 aa11.91□□□□□ -0.5
PRRC2B-207ENST00000458550 ZNF621Q6ZSS3 439 aa11.91□□□□□ -0.5
PRRC2B-207ENST00000458550 LRRC34Q8IZ02 419 aa11.91□□□□□ -0.5
PRRC2B-207ENST00000458550 MUC15Q8N387 334 aa11.91□□□□□ -0.5
PRRC2B-207ENST00000458550 ANKFN1Q8N957 763 aa11.91□□□□□ -0.5
PRRC2B-207ENST00000458550 CNOT9Q92600 299 aaKnown RBP11.91□□□□□ -0.5
PRRC2B-207ENST00000458550 CCDC115Q96NT0 180 aa11.91□□□□□ -0.5
PRRC2B-207ENST00000458550 MUS81Q96NY9 551 aa11.91□□□□□ -0.5
PRRC2B-207ENST00000458550 TRNT1Q96Q11 434 aaKnown RBP11.91□□□□□ -0.5
PRRC2B-207ENST00000458550 OR52E6Q96RD3 313 aa11.91□□□□□ -0.5
PRRC2B-207ENST00000458550 ZBTB18Q99592 522 aa11.91□□□□□ -0.5
PRRC2B-207ENST00000458550 PAIP2Q9BPZ3 127 aaKnown RBP11.91□□□□□ -0.5
PRRC2B-207ENST00000458550 C20orf27Q9GZN8 174 aa11.91□□□□□ -0.5
PRRC2B-207ENST00000458550 FKRPQ9H9S5 495 aa11.91□□□□□ -0.5
PRRC2B-207ENST00000458550 SSU72Q9NP77 194 aaKnown RBP11.91□□□□□ -0.5
PRRC2B-207ENST00000458550 BTNL2Q9UIR0 455 aa11.91□□□□□ -0.5
PRRC2B-207ENST00000458550 SLC9A8Q9Y2E8 581 aa11.91□□□□□ -0.5
PRRC2B-207ENST00000458550 SLC25A15Q9Y619 301 aa11.91□□□□□ -0.5
PRRC2B-207ENST00000458550 ATP23Q9Y6H3 246 aa11.91□□□□□ -0.5
PRRC2B-207ENST00000458550 FBN1P35555 2871 aaKnown RBP11.91□□□□□ -0.5
PRRC2B-207ENST00000458550 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.91□□□□□ -0.51e-9■□□□□ 11.1
PRRC2B-207ENST00000458550 TMEM72A0PK05 275 aa11.9□□□□□ -0.5
PRRC2B-207ENST00000458550 FAM234BA2RU67 622 aa11.9□□□□□ -0.5
PRRC2B-207ENST00000458550 AP3D1O14617 1153 aa11.9□□□□□ -0.5
PRRC2B-207ENST00000458550 THBS1P07996 1170 aa11.9□□□□□ -0.5
PRRC2B-207ENST00000458550 CXCR1P25024 350 aa11.9□□□□□ -0.5
PRRC2B-207ENST00000458550 TACR3P29371 465 aa11.9□□□□□ -0.5
PRRC2B-207ENST00000458550 SLC1A3P43003 542 aa11.9□□□□□ -0.5
PRRC2B-207ENST00000458550 MAP2K6P52564 334 aa11.9□□□□□ -0.5
PRRC2B-207ENST00000458550 UFM1P61960 85 aa11.9□□□□□ -0.5
PRRC2B-207ENST00000458550 IRX1P78414 480 aaPredicted RBP11.9□□□□□ -0.5
PRRC2B-207ENST00000458550 CHRNB3Q05901 458 aa11.9□□□□□ -0.5
PRRC2B-207ENST00000458550 LRRC74AQ0VAA2 488 aa11.9□□□□□ -0.5
PRRC2B-207ENST00000458550 GABRA6Q16445 453 aa11.9□□□□□ -0.5
PRRC2B-207ENST00000458550 SYPL1Q16563 259 aa11.9□□□□□ -0.5
PRRC2B-207ENST00000458550 C9orf135Q5VTT2 229 aa11.9□□□□□ -0.5
PRRC2B-207ENST00000458550 MALRD1Q5VYJ5 2156 aa11.9□□□□□ -0.5
PRRC2B-207ENST00000458550 PODNL1Q6PEZ8 512 aa11.9□□□□□ -0.5
PRRC2B-207ENST00000458550 LRRC74BQ6ZQY2 392 aa11.9□□□□□ -0.5
PRRC2B-207ENST00000458550 DNM1P46Q6ZS02 220 aa11.9□□□□□ -0.5
PRRC2B-207ENST00000458550 PEX5LQ8IYB4 626 aa11.9□□□□□ -0.5
PRRC2B-207ENST00000458550 OR52E4Q8NGH9 312 aa11.9□□□□□ -0.5
PRRC2B-207ENST00000458550 WDR60Q8WVS4 1066 aa11.9□□□□□ -0.5
PRRC2B-207ENST00000458550 SORT1Q99523 831 aa11.9□□□□□ -0.5
PRRC2B-207ENST00000458550 PNPOQ9NVS9 261 aa11.9□□□□□ -0.5
PRRC2B-207ENST00000458550 MALT1Q9UDY8 824 aa11.9□□□□□ -0.5
PRRC2B-207ENST00000458550 OSGIN1Q9UJX0 560 aa11.9□□□□□ -0.5
PRRC2B-207ENST00000458550 PRAMEF27A3QJZ7 478 aa11.89□□□□□ -0.51
PRRC2B-207ENST00000458550 CFAP73A6NFT4 308 aa11.89□□□□□ -0.51
PRRC2B-207ENST00000458550 AGAP5A6NIR3 686 aa11.89□□□□□ -0.51
PRRC2B-207ENST00000458550 A8MV72 311 aaPredicted RBP11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms