RNA–Protein interactions for RNA: ENST00000458059.7

CNEP1R1-203, Transcript of CTD nuclear envelope phosphatase 1 regulatory subunit 1, humanhuman

TSL 1 (best) BASIC

Gene CNEP1R1, Length 2,965 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNEP1R1-203ENST00000458059 CTSBP07858 339 aa18.04■□□□□ 0.48
CNEP1R1-203ENST00000458059 FAM53BQ14153 422 aa18.04■□□□□ 0.48
CNEP1R1-203ENST00000458059 GSG1Q2KHT4 349 aa18.04■□□□□ 0.48
CNEP1R1-203ENST00000458059 ALG10BQ5I7T1 473 aa18.04■□□□□ 0.48
CNEP1R1-203ENST00000458059 WDR45BQ5MNZ6 344 aa18.04■□□□□ 0.48
CNEP1R1-203ENST00000458059 GARNL3Q5VVW2 1013 aa18.04■□□□□ 0.48
CNEP1R1-203ENST00000458059 UBE2Q1Q7Z7E8 422 aa18.04■□□□□ 0.48
CNEP1R1-203ENST00000458059 GATSQ8NAP1 163 aa18.04■□□□□ 0.48
CNEP1R1-203ENST00000458059 OR1E3Q8WZA6 343 aa18.04■□□□□ 0.48
CNEP1R1-203ENST00000458059 TIMM29Q9BSF4 260 aa18.04■□□□□ 0.48
CNEP1R1-203ENST00000458059 GLTPQ9NZD2 209 aa18.04■□□□□ 0.48
CNEP1R1-203ENST00000458059 SPEF1Q9Y4P9 236 aa18.04■□□□□ 0.48
CNEP1R1-203ENST00000458059 OR6C74A6NCV1 312 aa18.03■□□□□ 0.48
CNEP1R1-203ENST00000458059 LYPD3O95274 346 aa18.03■□□□□ 0.48
CNEP1R1-203ENST00000458059 RAF1P04049 648 aa18.03■□□□□ 0.48
CNEP1R1-203ENST00000458059 SOX2P48431 317 aa18.03■□□□□ 0.48
CNEP1R1-203ENST00000458059 RUNX3Q13761 415 aa18.03■□□□□ 0.48
CNEP1R1-203ENST00000458059 EXOSC2Q13868 293 aaKnown RBP18.03■□□□□ 0.48
CNEP1R1-203ENST00000458059 DMKNQ6E0U4 476 aaPredicted RBP18.03■□□□□ 0.48
CNEP1R1-203ENST00000458059 Q6ZTK2 550 aa18.03■□□□□ 0.48
CNEP1R1-203ENST00000458059 CMTM4Q8IZR5 234 aa18.03■□□□□ 0.48
CNEP1R1-203ENST00000458059 NOX4Q9NPH5 578 aa18.03■□□□□ 0.48
CNEP1R1-203ENST00000458059 ZNF224Q9NZL3 707 aa18.03■□□□□ 0.48
CNEP1R1-203ENST00000458059 COPS3Q9UNS2 423 aa18.03■□□□□ 0.48
CNEP1R1-203ENST00000458059 NUBP2Q9Y5Y2 271 aa18.03■□□□□ 0.48
CNEP1R1-203ENST00000458059 MCIDASD6RGH6 385 aa18.03■□□□□ 0.48
CNEP1R1-203ENST00000458059 HRKO00198 91 aa18.03■□□□□ 0.48
CNEP1R1-203ENST00000458059 RPS27P42677 84 aaKnown RBP18.03■□□□□ 0.48
CNEP1R1-203ENST00000458059 PPP1CAP62136 330 aa18.03■□□□□ 0.48
CNEP1R1-203ENST00000458059 CEBPEQ15744 281 aa18.03■□□□□ 0.48
CNEP1R1-203ENST00000458059 SLC25A25Q6KCM7 469 aa18.03■□□□□ 0.48
CNEP1R1-203ENST00000458059 GPALPP1Q8IXQ4 340 aa18.03■□□□□ 0.48
CNEP1R1-203ENST00000458059 FTMTQ8N4E7 242 aa18.03■□□□□ 0.48
CNEP1R1-203ENST00000458059 OR2T4Q8NH00 348 aa18.03■□□□□ 0.48
CNEP1R1-203ENST00000458059 RPLP0P6Q8NHW5 317 aa18.03■□□□□ 0.48
CNEP1R1-203ENST00000458059 LRRC20Q8TCA0 184 aa18.03■□□□□ 0.48
CNEP1R1-203ENST00000458059 BADQ92934 168 aa18.03■□□□□ 0.48
CNEP1R1-203ENST00000458059 TSSK2Q96PF2 358 aa18.03■□□□□ 0.48
CNEP1R1-203ENST00000458059 RPP25Q9BUL9 199 aaKnown RBP18.03■□□□□ 0.48
CNEP1R1-203ENST00000458059 SEMA4CQ9C0C4 833 aa18.03■□□□□ 0.48
CNEP1R1-203ENST00000458059 TSPAN10Q9H1Z9 355 aaPredicted RBP18.03■□□□□ 0.48
CNEP1R1-203ENST00000458059 ST6GALNAC2Q9UJ37 374 aa18.03■□□□□ 0.48
CNEP1R1-203ENST00000458059 C7orf66A4D0T2 115 aa18.03■□□□□ 0.48
CNEP1R1-203ENST00000458059 BDH1Q02338 343 aa18.03■□□□□ 0.48
CNEP1R1-203ENST00000458059 OC90Q02509 493 aaPredicted RBP18.03■□□□□ 0.48
CNEP1R1-203ENST00000458059 TFF2Q03403 129 aa18.03■□□□□ 0.48
CNEP1R1-203ENST00000458059 ZNF542PQ5EBM4 170 aa18.03■□□□□ 0.48
CNEP1R1-203ENST00000458059 KANSL1Q7Z3B3 1105 aa18.03■□□□□ 0.48
CNEP1R1-203ENST00000458059 UXS1Q8NBZ7 420 aa18.03■□□□□ 0.48
CNEP1R1-203ENST00000458059 DNAAF1Q8NEP3 725 aa18.03■□□□□ 0.48
CNEP1R1-203ENST00000458059 OR8K3Q8NH51 312 aa18.03■□□□□ 0.48
CNEP1R1-203ENST00000458059 RASD2Q96D21 266 aa18.03■□□□□ 0.48
CNEP1R1-203ENST00000458059 DDOQ99489 341 aa18.03■□□□□ 0.48
CNEP1R1-203ENST00000458059 MCCC2Q9HCC0 563 aa18.03■□□□□ 0.48
CNEP1R1-203ENST00000458059 COLEC10Q9Y6Z7 277 aa18.03■□□□□ 0.48
CNEP1R1-203ENST00000458059 PRSS38A1L453 326 aa18.02■□□□□ 0.48
CNEP1R1-203ENST00000458059 NRG3P56975 720 aa18.02■□□□□ 0.48
CNEP1R1-203ENST00000458059 ZP1P60852 638 aa18.02■□□□□ 0.48
CNEP1R1-203ENST00000458059 GPR137Q96N19 417 aa18.02■□□□□ 0.48
CNEP1R1-203ENST00000458059 RANBP3Q9H6Z4 567 aaPredicted RBP18.02■□□□□ 0.48
CNEP1R1-203ENST00000458059 SLC17A4Q9Y2C5 497 aa18.02■□□□□ 0.48
CNEP1R1-203ENST00000458059 HCRTR1O43613 425 aa18.02■□□□□ 0.47
CNEP1R1-203ENST00000458059 UBL3O95164 117 aa18.02■□□□□ 0.47
CNEP1R1-203ENST00000458059 SNTA1Q13424 505 aa18.02■□□□□ 0.47
CNEP1R1-203ENST00000458059 ANGPT1Q15389 498 aa18.02■□□□□ 0.47
CNEP1R1-203ENST00000458059 FCRLAQ7L513 359 aa18.02■□□□□ 0.47
CNEP1R1-203ENST00000458059 PXKQ7Z7A4 578 aa18.02■□□□□ 0.47
CNEP1R1-203ENST00000458059 OR52I2Q8NH67 350 aa18.02■□□□□ 0.47
CNEP1R1-203ENST00000458059 KCTD12Q96CX2 325 aaKnown RBP18.02■□□□□ 0.47
CNEP1R1-203ENST00000458059 OR2A5Q96R48 311 aa18.02■□□□□ 0.47
CNEP1R1-203ENST00000458059 C20orf85Q9H1P6 137 aa18.02■□□□□ 0.47
CNEP1R1-203ENST00000458059 HEXA-AS1Q9H8Q6 139 aa18.02■□□□□ 0.47
CNEP1R1-203ENST00000458059 IL23AQ9NPF7 189 aa18.02■□□□□ 0.47
CNEP1R1-203ENST00000458059 PHF11Q9UIL8 331 aa18.02■□□□□ 0.47
CNEP1R1-203ENST00000458059 ELF5Q9UKW6 265 aaPredicted RBP18.02■□□□□ 0.47
CNEP1R1-203ENST00000458059 LINC01553A4QN01 128 aa18.01■□□□□ 0.47
CNEP1R1-203ENST00000458059 ARPC1BO15143 372 aaKnown RBP18.01■□□□□ 0.47
CNEP1R1-203ENST00000458059 PGDP52209 483 aa18.01■□□□□ 0.47
CNEP1R1-203ENST00000458059 RPS15AP62244 130 aaKnown RBP18.01■□□□□ 0.47
CNEP1R1-203ENST00000458059 RPS15P62841 145 aaKnown RBP18.01■□□□□ 0.47
CNEP1R1-203ENST00000458059 RPS21P63220 83 aaKnown RBP18.01■□□□□ 0.47
CNEP1R1-203ENST00000458059 COMMD7Q86VX2 200 aa18.01■□□□□ 0.47
CNEP1R1-203ENST00000458059 OR52R1Q8NGF1 315 aa18.01■□□□□ 0.47
CNEP1R1-203ENST00000458059 HSPA12BQ96MM6 686 aa18.01■□□□□ 0.47
CNEP1R1-203ENST00000458059 OR2M4Q96R27 311 aa18.01■□□□□ 0.47
CNEP1R1-203ENST00000458059 C19orf53Q9UNZ5 99 aaPredicted RBP18.01■□□□□ 0.47
CNEP1R1-203ENST00000458059 A0A1B0GTH9 108 aa18.01■□□□□ 0.47
CNEP1R1-203ENST00000458059 ERVK-25P63136 954 aa18.01■□□□□ 0.47
CNEP1R1-203ENST00000458059 POU6F2P78424 691 aaPredicted RBP18.01■□□□□ 0.47
CNEP1R1-203ENST00000458059 CAMK2DQ13557 499 aa18.01■□□□□ 0.47
CNEP1R1-203ENST00000458059 ERV3-1Q14264 604 aa18.01■□□□□ 0.47
CNEP1R1-203ENST00000458059 FAM3CQ92520 227 aa18.01■□□□□ 0.47
CNEP1R1-203ENST00000458059 RSPH9Q9H1X1 276 aaPredicted RBP18.01■□□□□ 0.47
CNEP1R1-203ENST00000458059 CLEC4MQ9H2X3 399 aaPredicted RBP18.01■□□□□ 0.47
CNEP1R1-203ENST00000458059 TRPV4Q9HBA0 871 aa18.01■□□□□ 0.47
CNEP1R1-203ENST00000458059 B3GNT2Q9NY97 397 aa18.01■□□□□ 0.47
CNEP1R1-203ENST00000458059 POM121CA8CG34 1229 aa18■□□□□ 0.47
CNEP1R1-203ENST00000458059 H0YGG7 62 aa18■□□□□ 0.47
CNEP1R1-203ENST00000458059 KHDRBS3O75525 346 aaKnown RBP18■□□□□ 0.47
CNEP1R1-203ENST00000458059 RGS11O94810 467 aa18■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms