RNA–Protein interactions for RNA: ENST00000455883.2

CSMD3-204, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 1 (best) BASIC

Gene CSMD3, Length 12,485 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-204ENST00000455883 FAM74A7A6NL05 159 aa4.9□□□□□ -1.63
CSMD3-204ENST00000455883 ZNF850A8MQ14 1090 aa4.9□□□□□ -1.63
CSMD3-204ENST00000455883 HMSDA8MTL9 139 aa4.9□□□□□ -1.63
CSMD3-204ENST00000455883 KDELR3O43731 214 aa4.9□□□□□ -1.63
CSMD3-204ENST00000455883 PIGAP37287 484 aa4.9□□□□□ -1.63
CSMD3-204ENST00000455883 CSNK1DP48730 415 aa4.9□□□□□ -1.63
CSMD3-204ENST00000455883 CASP6P55212 293 aa4.9□□□□□ -1.63
CSMD3-204ENST00000455883 AMHR2Q16671 573 aa4.9□□□□□ -1.63
CSMD3-204ENST00000455883 PNLIPRP3Q17RR3 467 aa4.9□□□□□ -1.63
CSMD3-204ENST00000455883 C1orf94Q6P1W5 598 aa4.9□□□□□ -1.63
CSMD3-204ENST00000455883 SEZ6L2Q6UXD5 910 aa4.9□□□□□ -1.63
CSMD3-204ENST00000455883 KCTD9Q7L273 389 aa4.9□□□□□ -1.63
CSMD3-204ENST00000455883 OTOP3Q7RTS5 596 aa4.9□□□□□ -1.63
CSMD3-204ENST00000455883 ZNF778Q96MU6 729 aa4.9□□□□□ -1.63
CSMD3-204ENST00000455883 UHRF1Q96T88 793 aaPredicted RBP4.9□□□□□ -1.63
CSMD3-204ENST00000455883 PDE7BQ9NP56 450 aa4.9□□□□□ -1.63
CSMD3-204ENST00000455883 ERVK-18Q9QC07 812 aa4.9□□□□□ -1.63
CSMD3-204ENST00000455883 RAB22AQ9UL26 194 aa4.9□□□□□ -1.63
CSMD3-204ENST00000455883 V9GY05 133 aa4.9□□□□□ -1.63
CSMD3-204ENST00000455883 COL22A1Q8NFW1 1626 aaPredicted RBP4.9□□□□□ -1.63
CSMD3-204ENST00000455883 PTPRFP10586 1907 aa4.9□□□□□ -1.63
CSMD3-204ENST00000455883 ALPK3Q96L96 1907 aa4.9□□□□□ -1.63
CSMD3-204ENST00000455883 TRAV6A0A075B6T7 132 aa4.9□□□□□ -1.63
CSMD3-204ENST00000455883 A0A1W2PPM1 405 aa4.9□□□□□ -1.63
CSMD3-204ENST00000455883 TRAF3IP2O43734 574 aaPredicted RBP4.9□□□□□ -1.63
CSMD3-204ENST00000455883 ZNF354AO60765 605 aaPredicted RBP4.9□□□□□ -1.63
CSMD3-204ENST00000455883 GHRHP01286 108 aa4.9□□□□□ -1.63
CSMD3-204ENST00000455883 PTH2RP49190 550 aa4.9□□□□□ -1.63
CSMD3-204ENST00000455883 TSLPQ969D9 159 aa4.9□□□□□ -1.63
CSMD3-204ENST00000455883 PDZD7Q9H5P4 517 aa4.9□□□□□ -1.63
CSMD3-204ENST00000455883 GJD2Q9UKL4 321 aa4.9□□□□□ -1.63
CSMD3-204ENST00000455883 OPN1MWP04001 364 aa4.9□□□□□ -1.63
CSMD3-204ENST00000455883 OPN1MW2P0DN77 364 aa4.9□□□□□ -1.63
CSMD3-204ENST00000455883 OPN1MW3P0DN78 364 aa4.9□□□□□ -1.63
CSMD3-204ENST00000455883 SELEP16581 610 aa4.9□□□□□ -1.63
CSMD3-204ENST00000455883 FGF7P21781 194 aa4.9□□□□□ -1.63
CSMD3-204ENST00000455883 UBE2KP61086 200 aa4.9□□□□□ -1.63
CSMD3-204ENST00000455883 SP2Q02086 613 aa4.9□□□□□ -1.63
CSMD3-204ENST00000455883 CLPPQ16740 277 aaPredicted RBP4.9□□□□□ -1.63
CSMD3-204ENST00000455883 FUT10Q6P4F1 479 aa4.9□□□□□ -1.63
CSMD3-204ENST00000455883 SSX7Q7RTT5 188 aa4.9□□□□□ -1.63
CSMD3-204ENST00000455883 OR5W2Q8NH69 310 aa4.9□□□□□ -1.63
CSMD3-204ENST00000455883 ST8SIA4Q92187 359 aa4.9□□□□□ -1.63
CSMD3-204ENST00000455883 CHIAQ9BZP6 476 aa4.9□□□□□ -1.63
CSMD3-204ENST00000455883 EXOSC3Q9NQT5 275 aaKnown RBP4.9□□□□□ -1.63
CSMD3-204ENST00000455883 TRAPPC4Q9Y296 219 aa4.9□□□□□ -1.63
CSMD3-204ENST00000455883 HPNP05981 417 aa4.9□□□□□ -1.63
CSMD3-204ENST00000455883 ATP1B3P54709 279 aa4.9□□□□□ -1.63
CSMD3-204ENST00000455883 SURF2Q15527 256 aaPredicted RBP4.9□□□□□ -1.63
CSMD3-204ENST00000455883 MEP1BQ16820 701 aa4.9□□□□□ -1.63
CSMD3-204ENST00000455883 COMTD1Q86VU5 262 aa4.9□□□□□ -1.63
CSMD3-204ENST00000455883 ANKRD46Q86W74 232 aa4.9□□□□□ -1.63
CSMD3-204ENST00000455883 PLXDC1Q8IUK5 500 aa4.9□□□□□ -1.63
CSMD3-204ENST00000455883 C1orf174Q8IYL3 243 aa4.9□□□□□ -1.63
CSMD3-204ENST00000455883 SYS1Q8N2H4 156 aa4.9□□□□□ -1.63
CSMD3-204ENST00000455883 MIB2Q96AX9 1013 aa4.9□□□□□ -1.63
CSMD3-204ENST00000455883 MCHR1Q99705 422 aa4.9□□□□□ -1.63
CSMD3-204ENST00000455883 KLRF1Q9NZS2 232 aa4.9□□□□□ -1.63
CSMD3-204ENST00000455883 RGS13O14921 159 aa4.89□□□□□ -1.63
CSMD3-204ENST00000455883 GALR3O60755 368 aaPredicted RBP4.89□□□□□ -1.63
CSMD3-204ENST00000455883 PDGFAP04085 211 aa4.89□□□□□ -1.63
CSMD3-204ENST00000455883 SERPINA5P05154 406 aa4.89□□□□□ -1.63
CSMD3-204ENST00000455883 C6P13671 934 aa4.89□□□□□ -1.63
CSMD3-204ENST00000455883 CD1DP15813 335 aa4.89□□□□□ -1.63
CSMD3-204ENST00000455883 TAS2R38P59533 333 aa4.89□□□□□ -1.63
CSMD3-204ENST00000455883 ERVS71-1P61550 626 aa4.89□□□□□ -1.63
CSMD3-204ENST00000455883 GRM7Q14831 915 aa4.89□□□□□ -1.63
CSMD3-204ENST00000455883 HAGHQ16775 308 aa4.89□□□□□ -1.63
CSMD3-204ENST00000455883 LCTLQ6UWM7 567 aa4.89□□□□□ -1.63
CSMD3-204ENST00000455883 IGDCC3Q8IVU1 814 aa4.89□□□□□ -1.63
CSMD3-204ENST00000455883 TMEM151AQ8N4L1 468 aa4.89□□□□□ -1.63
CSMD3-204ENST00000455883 RAB24Q969Q5 203 aa4.89□□□□□ -1.63
CSMD3-204ENST00000455883 CTRCQ99895 268 aa4.89□□□□□ -1.63
CSMD3-204ENST00000455883 MTPAPQ9NVV4 582 aaKnown RBP eCLIP4.89□□□□□ -1.63
CSMD3-204ENST00000455883 PLEK2Q9NYT0 353 aa4.89□□□□□ -1.63
CSMD3-204ENST00000455883 TAS2R16Q9NYV7 291 aa4.89□□□□□ -1.63
CSMD3-204ENST00000455883 LOC102723532A0A0G2JNH3 316 aa4.89□□□□□ -1.63
CSMD3-204ENST00000455883 ATP1B1P05026 303 aa4.89□□□□□ -1.63
CSMD3-204ENST00000455883 BSGP35613 385 aa4.89□□□□□ -1.63
CSMD3-204ENST00000455883 CCR9P51686 369 aa4.89□□□□□ -1.63
CSMD3-204ENST00000455883 ZNF765Q7L2R6 523 aa4.89□□□□□ -1.63
CSMD3-204ENST00000455883 SNX29P2Q8IUI4 249 aa4.89□□□□□ -1.63
CSMD3-204ENST00000455883 DYNC2LI1Q8TCX1 351 aa4.89□□□□□ -1.63
CSMD3-204ENST00000455883 MICU1Q9BPX6 476 aa4.89□□□□□ -1.63
CSMD3-204ENST00000455883 POLD4Q9HCU8 107 aa4.89□□□□□ -1.63
CSMD3-204ENST00000455883 NDUFB11Q9NX14 153 aa4.89□□□□□ -1.63
CSMD3-204ENST00000455883 DIMT1Q9UNQ2 313 aaKnown RBP4.89□□□□□ -1.63
CSMD3-204ENST00000455883 A0A087WZY1 265 aa4.89□□□□□ -1.63
CSMD3-204ENST00000455883 GM2AP17900 193 aa4.89□□□□□ -1.63
CSMD3-204ENST00000455883 SPANXN4Q5MJ08 99 aa4.89□□□□□ -1.63
CSMD3-204ENST00000455883 CHADLQ6NUI6 762 aa4.89□□□□□ -1.63
CSMD3-204ENST00000455883 IL17RDQ8NFM7 739 aa4.89□□□□□ -1.63
CSMD3-204ENST00000455883 IRF7Q92985 503 aa4.89□□□□□ -1.63
CSMD3-204ENST00000455883 CHST6Q9GZX3 395 aa4.89□□□□□ -1.63
CSMD3-204ENST00000455883 LCTP09848 1927 aa4.89□□□□□ -1.63
CSMD3-204ENST00000455883 CPSF4LA6NMK7 179 aaKnown RBP4.89□□□□□ -1.63
CSMD3-204ENST00000455883 SOCS7O14512 581 aa4.89□□□□□ -1.63
CSMD3-204ENST00000455883 KCNAB3O43448 404 aa4.89□□□□□ -1.63
CSMD3-204ENST00000455883 BCHEP06276 602 aa4.89□□□□□ -1.63
CSMD3-204ENST00000455883 C5AR1P21730 350 aa4.89□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms