RNA–Protein interactions for RNA: ENST00000454583.6

RIF1-207, Transcript of replication timing regulatory factor 1, humanhuman

TSL 2

Gene RIF1, Length 3,552 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-207ENST00000454583 EXD2Q9NVH0 621 aa4.47□□□□□ -1.69
RIF1-207ENST00000454583 P4HTMQ9NXG6 502 aa4.47□□□□□ -1.69
RIF1-207ENST00000454583 TUBD1Q9UJT1 453 aa4.47□□□□□ -1.69
RIF1-207ENST00000454583 FBXL2Q9UKC9 423 aa4.47□□□□□ -1.69
RIF1-207ENST00000454583 TRAPPC4Q9Y296 219 aa4.47□□□□□ -1.69
RIF1-207ENST00000454583 UGT2A1Q9Y4X1 527 aa4.47□□□□□ -1.69
RIF1-207ENST00000454583 NPFFR2Q9Y5X5 522 aa4.47□□□□□ -1.69
RIF1-207ENST00000454583 UTP20O75691 2785 aaKnown RBP4.47□□□□□ -1.69
RIF1-207ENST00000454583 PIEZO2Q9H5I5 2752 aa4.47□□□□□ -1.69
RIF1-207ENST00000454583 IGKV3D-15A0A087WSY6 115 aa4.47□□□□□ -1.69
RIF1-207ENST00000454583 ZNF716A6NP11 495 aa4.47□□□□□ -1.69
RIF1-207ENST00000454583 SUV39H1O43463 412 aa4.47□□□□□ -1.69
RIF1-207ENST00000454583 CHP2O43745 196 aa4.47□□□□□ -1.69
RIF1-207ENST00000454583 STX11O75558 287 aa4.47□□□□□ -1.69
RIF1-207ENST00000454583 C1QL1O75973 258 aa4.47□□□□□ -1.69
RIF1-207ENST00000454583 PTHP01270 115 aa4.47□□□□□ -1.69
RIF1-207ENST00000454583 GALP22466 123 aa4.47□□□□□ -1.69
RIF1-207ENST00000454583 FPR3P25089 353 aa4.47□□□□□ -1.69
RIF1-207ENST00000454583 ADH6P28332 368 aa4.47□□□□□ -1.69
RIF1-207ENST00000454583 TGFBR1P36897 503 aa4.47□□□□□ -1.69
RIF1-207ENST00000454583 TNFSF10P50591 281 aa4.47□□□□□ -1.69
RIF1-207ENST00000454583 CDH12P55289 794 aa4.47□□□□□ -1.69
RIF1-207ENST00000454583 NDUFAF6Q330K2 333 aa4.47□□□□□ -1.69
RIF1-207ENST00000454583 PODNL1Q6PEZ8 512 aa4.47□□□□□ -1.69
RIF1-207ENST00000454583 FAM162AQ96A26 154 aa4.47□□□□□ -1.69
RIF1-207ENST00000454583 AHCYL2Q96HN2 611 aaKnown RBP4.47□□□□□ -1.69
RIF1-207ENST00000454583 DGAT2Q96PD7 388 aa4.47□□□□□ -1.69
RIF1-207ENST00000454583 SNX18Q96RF0 628 aa4.47□□□□□ -1.69
RIF1-207ENST00000454583 YIPF3Q9GZM5 350 aa4.47□□□□□ -1.69
RIF1-207ENST00000454583 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP4.47□□□□□ -1.692e-6■■■■□ 21.9
RIF1-207ENST00000454583 RNF122Q9H9V4 155 aa4.47□□□□□ -1.69
RIF1-207ENST00000454583 ACKR4Q9NPB9 350 aa4.47□□□□□ -1.69
RIF1-207ENST00000454583 ZCCHC3Q9NUD5 404 aaKnown RBP4.47□□□□□ -1.69
RIF1-207ENST00000454583 ZNF224Q9NZL3 707 aa4.47□□□□□ -1.69
RIF1-207ENST00000454583 PDP1Q9P0J1 537 aaPredicted RBP4.47□□□□□ -1.69
RIF1-207ENST00000454583 KLHL3Q9UH77 587 aa4.47□□□□□ -1.69
RIF1-207ENST00000454583 PSME2Q9UL46 239 aa4.47□□□□□ -1.69
RIF1-207ENST00000454583 WIF1Q9Y5W5 379 aa4.47□□□□□ -1.69
RIF1-207ENST00000454583 FLVCR1Q9Y5Y0 555 aa4.47□□□□□ -1.69
RIF1-207ENST00000454583 ZNF780BQ9Y6R6 833 aa4.47□□□□□ -1.69
RIF1-207ENST00000454583 V9GYH0 126 aa4.47□□□□□ -1.69
RIF1-207ENST00000454583 TRABD2BA6NFA1 517 aa4.46□□□□□ -1.7
RIF1-207ENST00000454583 ZNF99A8MXY4 864 aaPredicted RBP4.46□□□□□ -1.7
RIF1-207ENST00000454583 PRKYO43930 277 aa4.46□□□□□ -1.7
RIF1-207ENST00000454583 SCG5P05408 212 aa4.46□□□□□ -1.7
RIF1-207ENST00000454583 CPEP16870 476 aa4.46□□□□□ -1.7
RIF1-207ENST00000454583 ZNF708P17019 499 aa4.46□□□□□ -1.7
RIF1-207ENST00000454583 NT5EP21589 574 aa4.46□□□□□ -1.7
RIF1-207ENST00000454583 CSTF2P33240 577 aaKnown RBP eCLIP4.46□□□□□ -1.7
RIF1-207ENST00000454583 DLSTP36957 453 aa4.46□□□□□ -1.7
RIF1-207ENST00000454583 CD96P40200 585 aa4.46□□□□□ -1.7
RIF1-207ENST00000454583 MAP2K4P45985 399 aa4.46□□□□□ -1.7
RIF1-207ENST00000454583 OR1E2P47887 323 aa4.46□□□□□ -1.7
RIF1-207ENST00000454583 SLC16A1P53985 500 aa4.46□□□□□ -1.7
RIF1-207ENST00000454583 CRISP1P54107 249 aa4.46□□□□□ -1.7
RIF1-207ENST00000454583 CRYZQ08257 329 aaKnown RBP4.46□□□□□ -1.7
RIF1-207ENST00000454583 OXA1LQ15070 435 aa4.46□□□□□ -1.7
RIF1-207ENST00000454583 RPS6KA2Q15349 733 aa4.46□□□□□ -1.7
RIF1-207ENST00000454583 MOGQ16653 247 aa4.46□□□□□ -1.7
RIF1-207ENST00000454583 SYT14P1Q58G82 188 aa4.46□□□□□ -1.7
RIF1-207ENST00000454583 C3orf38Q5JPI3 329 aa4.46□□□□□ -1.7
RIF1-207ENST00000454583 ARMC4Q5T2S8 1044 aa4.46□□□□□ -1.7
RIF1-207ENST00000454583 PDZK1Q5T2W1 519 aa4.46□□□□□ -1.7
RIF1-207ENST00000454583 LINC01590Q5TEZ4 76 aa4.46□□□□□ -1.7
RIF1-207ENST00000454583 ARHGAP40Q5TG30 622 aa4.46□□□□□ -1.7
RIF1-207ENST00000454583 RTL6Q6ICC9 239 aa4.46□□□□□ -1.7
RIF1-207ENST00000454583 ZNF621Q6ZSS3 439 aa4.46□□□□□ -1.7
RIF1-207ENST00000454583 RASSF6Q6ZTQ3 369 aa4.46□□□□□ -1.7
RIF1-207ENST00000454583 MBOAT2Q6ZWT7 520 aa4.46□□□□□ -1.7
RIF1-207ENST00000454583 CCDC190Q86UF4 302 aa4.46□□□□□ -1.7
RIF1-207ENST00000454583 IFNEQ86WN2 208 aa4.46□□□□□ -1.7
RIF1-207ENST00000454583 OR10G2Q8NGC3 310 aa4.46□□□□□ -1.7
RIF1-207ENST00000454583 OR6Q1Q8NGQ2 317 aa4.46□□□□□ -1.7
RIF1-207ENST00000454583 DOK4Q8TEW6 326 aa4.46□□□□□ -1.7
RIF1-207ENST00000454583 GIPC3Q8TF64 312 aa4.46□□□□□ -1.7
RIF1-207ENST00000454583 THAP4Q8WY91 577 aa4.46□□□□□ -1.7
RIF1-207ENST00000454583 TM9SF4Q92544 642 aa4.46□□□□□ -1.7
RIF1-207ENST00000454583 OTUB1Q96FW1 271 aaPredicted RBP4.46□□□□□ -1.7
RIF1-207ENST00000454583 SH3YL1Q96HL8 342 aaPredicted RBP4.46□□□□□ -1.7
RIF1-207ENST00000454583 PTCHD1Q96NR3 888 aa4.46□□□□□ -1.7
RIF1-207ENST00000454583 SLX1AQ9BQ83 275 aa4.46□□□□□ -1.7
RIF1-207ENST00000454583 MED18Q9BUE0 208 aa4.46□□□□□ -1.7
RIF1-207ENST00000454583 HAO2Q9NYQ3 351 aa4.46□□□□□ -1.7
RIF1-207ENST00000454583 TRPC4Q9UBN4 977 aa4.46□□□□□ -1.7
RIF1-207ENST00000454583 PADI1Q9ULC6 663 aa4.46□□□□□ -1.7
RIF1-207ENST00000454583 ZMIZ1Q9ULJ6 1067 aa4.46□□□□□ -1.7
RIF1-207ENST00000454583 FAF1Q9UNN5 650 aaPredicted RBP4.46□□□□□ -1.7
RIF1-207ENST00000454583 DIMT1Q9UNQ2 313 aaKnown RBP4.46□□□□□ -1.7
RIF1-207ENST00000454583 SIGLEC7Q9Y286 467 aa4.46□□□□□ -1.7
RIF1-207ENST00000454583 HIF3AQ9Y2N7 669 aa4.46□□□□□ -1.7
RIF1-207ENST00000454583 IFT52Q9Y366 437 aa4.46□□□□□ -1.7
RIF1-207ENST00000454583 LRBAP50851 2863 aa4.46□□□□□ -1.7
RIF1-207ENST00000454583 CACNA1HO95180 2353 aa4.46□□□□□ -1.7
RIF1-207ENST00000454583 A0A1W2PPW3 197 aa4.46□□□□□ -1.7
RIF1-207ENST00000454583 SHISA3A0PJX4 238 aa4.46□□□□□ -1.7
RIF1-207ENST00000454583 M0R3H8 397 aa4.46□□□□□ -1.7
RIF1-207ENST00000454583 NKX2-8O15522 239 aa4.46□□□□□ -1.7
RIF1-207ENST00000454583 PIP5K1CO60331 668 aa4.46□□□□□ -1.7
RIF1-207ENST00000454583 ITGA10O75578 1167 aa4.46□□□□□ -1.7
RIF1-207ENST00000454583 OR2J2O76002 312 aa4.46□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms