RNA–Protein interactions for RNA: ENST00000453259.2

LYSMD3-202, Transcript of LysM domain containing 3, humanhuman

TSL 3

Gene LYSMD3, Length 553 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3-202ENST00000453259 FOXN4Q96NZ1 517 aa12.48□□□□□ -0.41
LYSMD3-202ENST00000453259 NAA11Q9BSU3 229 aaPredicted RBP12.48□□□□□ -0.41
LYSMD3-202ENST00000453259 RAB1BQ9H0U4 201 aa12.48□□□□□ -0.41
LYSMD3-202ENST00000453259 TUBB1Q9H4B7 451 aa12.48□□□□□ -0.41
LYSMD3-202ENST00000453259 CA10Q9NS85 328 aa12.48□□□□□ -0.41
LYSMD3-202ENST00000453259 FLVCR1Q9Y5Y0 555 aa12.48□□□□□ -0.41
LYSMD3-202ENST00000453259 KCNE3Q9Y6H6 103 aa12.48□□□□□ -0.41
LYSMD3-202ENST00000453259 A0A1W2PR80 420 aa12.47□□□□□ -0.41
LYSMD3-202ENST00000453259 OR6C65A6NJZ3 312 aa12.47□□□□□ -0.41
LYSMD3-202ENST00000453259 VSTM5A8MXK1 200 aa12.47□□□□□ -0.41
LYSMD3-202ENST00000453259 CYP7B1O75881 506 aa12.47□□□□□ -0.41
LYSMD3-202ENST00000453259 LY6HO94772 140 aa12.47□□□□□ -0.41
LYSMD3-202ENST00000453259 C6orf47O95873 294 aa12.47□□□□□ -0.41
LYSMD3-202ENST00000453259 CRYAAP02489 173 aa12.47□□□□□ -0.41
LYSMD3-202ENST00000453259 TACSTD2P09758 323 aa12.47□□□□□ -0.41
LYSMD3-202ENST00000453259 EFNA1P20827 205 aaPredicted RBP12.47□□□□□ -0.41
LYSMD3-202ENST00000453259 NTF4P34130 210 aa12.47□□□□□ -0.41
LYSMD3-202ENST00000453259 PGM1P36871 562 aa12.47□□□□□ -0.41
LYSMD3-202ENST00000453259 IDH3GP51553 393 aaPredicted RBP12.47□□□□□ -0.41
LYSMD3-202ENST00000453259 GPR68Q15743 365 aa12.47□□□□□ -0.41
LYSMD3-202ENST00000453259 ZSWIM7Q19AV6 140 aa12.47□□□□□ -0.41
LYSMD3-202ENST00000453259 FAM153CQ494X1 144 aa12.47□□□□□ -0.41
LYSMD3-202ENST00000453259 ATAD3BQ5T9A4 648 aa12.47□□□□□ -0.41
LYSMD3-202ENST00000453259 PAQR6Q6TCH4 344 aa12.47□□□□□ -0.41
LYSMD3-202ENST00000453259 C12orf54Q6X4T0 127 aa12.47□□□□□ -0.41
LYSMD3-202ENST00000453259 C16orf62Q7Z3J2 963 aa12.47□□□□□ -0.41
LYSMD3-202ENST00000453259 DDIASQ8IXT1 998 aa12.47□□□□□ -0.41
LYSMD3-202ENST00000453259 FAM169BQ8N8A8 192 aa12.47□□□□□ -0.41
LYSMD3-202ENST00000453259 CCDC63Q8NA47 563 aa12.47□□□□□ -0.41
LYSMD3-202ENST00000453259 OR52E4Q8NGH9 312 aa12.47□□□□□ -0.41
LYSMD3-202ENST00000453259 TWIST2Q8WVJ9 160 aa12.47□□□□□ -0.41
LYSMD3-202ENST00000453259 NEU4Q8WWR8 484 aaPredicted RBP12.47□□□□□ -0.41
LYSMD3-202ENST00000453259 DDIT4LQ96D03 193 aa12.47□□□□□ -0.41
LYSMD3-202ENST00000453259 ARL5BQ96KC2 179 aa12.47□□□□□ -0.41
LYSMD3-202ENST00000453259 SF3B5Q9BWJ5 86 aaKnown RBP12.47□□□□□ -0.41
LYSMD3-202ENST00000453259 BPESC1Q9GZL8 116 aa12.47□□□□□ -0.41
LYSMD3-202ENST00000453259 SAP130Q9H0E3 1048 aa12.47□□□□□ -0.41
LYSMD3-202ENST00000453259 PLK3Q9H4B4 646 aa12.47□□□□□ -0.41
LYSMD3-202ENST00000453259 CTPS2Q9NRF8 586 aa12.47□□□□□ -0.41
LYSMD3-202ENST00000453259 SLC7A10Q9NS82 523 aa12.47□□□□□ -0.41
LYSMD3-202ENST00000453259 TMEFF2Q9UIK5 374 aaPredicted RBP12.47□□□□□ -0.41
LYSMD3-202ENST00000453259 MOKQ9UQ07 419 aa12.47□□□□□ -0.41
LYSMD3-202ENST00000453259 CFLARO15519 480 aa12.46□□□□□ -0.41
LYSMD3-202ENST00000453259 SPRY1O43609 319 aaPredicted RBP12.46□□□□□ -0.41
LYSMD3-202ENST00000453259 FCMRO60667 390 aa12.46□□□□□ -0.41
LYSMD3-202ENST00000453259 TRIM13O60858 407 aa12.46□□□□□ -0.41
LYSMD3-202ENST00000453259 SRP14P37108 136 aaKnown RBP12.46□□□□□ -0.41
LYSMD3-202ENST00000453259 KHKP50053 298 aa12.46□□□□□ -0.41
LYSMD3-202ENST00000453259 RNF144AP50876 292 aaPredicted RBP12.46□□□□□ -0.41
LYSMD3-202ENST00000453259 SLC25A3Q00325 362 aa12.46□□□□□ -0.41
LYSMD3-202ENST00000453259 SLC17A1Q14916 467 aa12.46□□□□□ -0.41
LYSMD3-202ENST00000453259 ATP6AP1LQ52LC2 224 aa12.46□□□□□ -0.41
LYSMD3-202ENST00000453259 XKR7Q5GH72 579 aa12.46□□□□□ -0.41
LYSMD3-202ENST00000453259 DEF8Q6ZN54 512 aa12.46□□□□□ -0.41
LYSMD3-202ENST00000453259 CMIPQ8IY22 773 aa12.46□□□□□ -0.41
LYSMD3-202ENST00000453259 LINC01356Q8N9X3 169 aa12.46□□□□□ -0.41
LYSMD3-202ENST00000453259 OR4F15Q8NGB8 312 aa12.46□□□□□ -0.41
LYSMD3-202ENST00000453259 OR5D16Q8NGK9 328 aa12.46□□□□□ -0.41
LYSMD3-202ENST00000453259 C3orf49Q96BT1 292 aa12.46□□□□□ -0.41
LYSMD3-202ENST00000453259 C1orf159Q96HA4 380 aa12.46□□□□□ -0.41
LYSMD3-202ENST00000453259 SLC38A2Q96QD8 506 aa12.46□□□□□ -0.41
LYSMD3-202ENST00000453259 VRK1Q99986 396 aaPredicted RBP12.46□□□□□ -0.41
LYSMD3-202ENST00000453259 DUSP26Q9BV47 211 aa12.46□□□□□ -0.41
LYSMD3-202ENST00000453259 C1QTNF6Q9BXI9 259 aa12.46□□□□□ -0.41
LYSMD3-202ENST00000453259 TBK1Q9UHD2 729 aa12.46□□□□□ -0.41
LYSMD3-202ENST00000453259 KCNE5Q9UJ90 142 aa12.46□□□□□ -0.41
LYSMD3-202ENST00000453259 HEATR1Q9H583 2144 aaKnown RBP12.46□□□□□ -0.42
LYSMD3-202ENST00000453259 FAAHO00519 579 aa12.45□□□□□ -0.42
LYSMD3-202ENST00000453259 COPEO14579 308 aa12.45□□□□□ -0.42
LYSMD3-202ENST00000453259 NPHS1O60500 1241 aa12.45□□□□□ -0.42
LYSMD3-202ENST00000453259 HOXB1P14653 301 aaPredicted RBP12.45□□□□□ -0.42
LYSMD3-202ENST00000453259 UQCRBP14927 111 aa12.45□□□□□ -0.42
LYSMD3-202ENST00000453259 MATN1P21941 496 aa12.45□□□□□ -0.42
LYSMD3-202ENST00000453259 SERPINB5P36952 375 aa12.45□□□□□ -0.42
LYSMD3-202ENST00000453259 SLC1A3P43003 542 aa12.45□□□□□ -0.42
LYSMD3-202ENST00000453259 OR2B6P58173 313 aa12.45□□□□□ -0.42
LYSMD3-202ENST00000453259 HBA1P69905 142 aa12.45□□□□□ -0.42
LYSMD3-202ENST00000453259 POU3F1Q03052 451 aaPredicted RBP12.45□□□□□ -0.42
LYSMD3-202ENST00000453259 MAD2L1Q13257 205 aaPredicted RBP12.45□□□□□ -0.42
LYSMD3-202ENST00000453259 PTGR1Q14914 329 aa12.45□□□□□ -0.42
LYSMD3-202ENST00000453259 CARTPTQ16568 116 aa12.45□□□□□ -0.42
LYSMD3-202ENST00000453259 UGT3A2Q3SY77 523 aa12.45□□□□□ -0.42
LYSMD3-202ENST00000453259 TSPO2Q5TGU0 170 aa12.45□□□□□ -0.42
LYSMD3-202ENST00000453259 EMBQ6PCB8 327 aa12.45□□□□□ -0.42
LYSMD3-202ENST00000453259 ADGRG3Q86Y34 549 aa12.45□□□□□ -0.42
LYSMD3-202ENST00000453259 CCDC103Q8IW40 242 aa12.45□□□□□ -0.42
LYSMD3-202ENST00000453259 RIMKLAQ8IXN7 391 aa12.45□□□□□ -0.42
LYSMD3-202ENST00000453259 ARFGAP2Q8N6H7 521 aa12.45□□□□□ -0.42
LYSMD3-202ENST00000453259 NOA1Q8NC60 698 aaKnown RBP12.45□□□□□ -0.42
LYSMD3-202ENST00000453259 NUP37Q8NFH4 326 aa12.45□□□□□ -0.42
LYSMD3-202ENST00000453259 SGMS2Q8NHU3 365 aa12.45□□□□□ -0.42
LYSMD3-202ENST00000453259 MAGEE2Q8TD90 523 aaPredicted RBP12.45□□□□□ -0.42
LYSMD3-202ENST00000453259 ZNF442Q9H7R0 627 aa12.45□□□□□ -0.42
LYSMD3-202ENST00000453259 TMEM45AQ9NWC5 275 aa12.45□□□□□ -0.42
LYSMD3-202ENST00000453259 CRNNQ9UBG3 495 aaPredicted RBP12.45□□□□□ -0.42
LYSMD3-202ENST00000453259 MKLN1Q9UL63 735 aa12.45□□□□□ -0.42
LYSMD3-202ENST00000453259 FIS1Q9Y3D6 152 aa12.45□□□□□ -0.42
LYSMD3-202ENST00000453259 WDR45Q9Y484 360 aa12.45□□□□□ -0.42
LYSMD3-202ENST00000453259 ARPC4-TTLL3A0A0A6YYG9 625 aa12.44□□□□□ -0.42
LYSMD3-202ENST00000453259 A0A1W2PPM1 405 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms