RNA–Protein interactions for RNA: ENST00000450303.6

PRPF40A-204, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 3

Gene PRPF40A, Length 496 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-204ENST00000450303 PEPDP12955 493 aa15.33■□□□□ 0.04
PRPF40A-204ENST00000450303 POU3F2P20265 443 aaPredicted RBP15.33■□□□□ 0.04
PRPF40A-204ENST00000450303 ATP6V1B2P21281 511 aa15.33■□□□□ 0.04
PRPF40A-204ENST00000450303 HSPA13P48723 471 aa15.33■□□□□ 0.04
PRPF40A-204ENST00000450303 SUCLG1P53597 346 aaKnown RBP15.33■□□□□ 0.04
PRPF40A-204ENST00000450303 CLDN15P56746 228 aa15.33■□□□□ 0.04
PRPF40A-204ENST00000450303 C17orf67Q0P5P2 114 aa15.33■□□□□ 0.04
PRPF40A-204ENST00000450303 MAPK14Q16539 360 aa15.33■□□□□ 0.04
PRPF40A-204ENST00000450303 FBXL19-AS1Q494R0 122 aa15.33■□□□□ 0.04
PRPF40A-204ENST00000450303 RNF220Q5VTB9 566 aa15.33■□□□□ 0.04
PRPF40A-204ENST00000450303 CHMP1BQ7LBR1 199 aa15.33■□□□□ 0.04
PRPF40A-204ENST00000450303 P4HA3Q7Z4N8 544 aa15.33■□□□□ 0.04
PRPF40A-204ENST00000450303 LUZP2Q86TE4 346 aa15.33■□□□□ 0.04
PRPF40A-204ENST00000450303 ZNF440Q8IYI8 595 aa15.33■□□□□ 0.04
PRPF40A-204ENST00000450303 SMYD1Q8NB12 490 aa15.33■□□□□ 0.04
PRPF40A-204ENST00000450303 SMPDL3BQ92485 455 aa15.33■□□□□ 0.04
PRPF40A-204ENST00000450303 PYURFQ96I23 114 aa15.33■□□□□ 0.04
PRPF40A-204ENST00000450303 NR1H4Q96RI1 486 aaPredicted RBP15.33■□□□□ 0.04
PRPF40A-204ENST00000450303 SLC24A3Q9HC58 644 aa15.33■□□□□ 0.04
PRPF40A-204ENST00000450303 KCNE5Q9UJ90 142 aa15.33■□□□□ 0.04
PRPF40A-204ENST00000450303 VDAC3Q9Y277 283 aa15.33■□□□□ 0.04
PRPF40A-204ENST00000450303 SLC9A8Q9Y2E8 581 aa15.33■□□□□ 0.04
PRPF40A-204ENST00000450303 CCDC168Q8NDH2 2452 aa15.33■□□□□ 0.04
PRPF40A-204ENST00000450303 ZNF264O43296 627 aa15.32■□□□□ 0.04
PRPF40A-204ENST00000450303 EIF4E2O60573 245 aaKnown RBP15.32■□□□□ 0.04
PRPF40A-204ENST00000450303 IL18BPO95998 194 aa15.32■□□□□ 0.04
PRPF40A-204ENST00000450303 FESP07332 822 aa15.32■□□□□ 0.04
PRPF40A-204ENST00000450303 UBL4AP11441 157 aa15.32■□□□□ 0.04
PRPF40A-204ENST00000450303 RNF144AP50876 292 aaPredicted RBP15.32■□□□□ 0.04
PRPF40A-204ENST00000450303 GANABQ14697 944 aaKnown RBP15.32■□□□□ 0.04
PRPF40A-204ENST00000450303 BCL2A1Q16548 175 aa15.32■□□□□ 0.04
PRPF40A-204ENST00000450303 IFI44LQ53G44 452 aa15.32■□□□□ 0.04
PRPF40A-204ENST00000450303 MRPL2Q5T653 305 aaKnown RBP15.32■□□□□ 0.04
PRPF40A-204ENST00000450303 ZNF836Q6ZNA1 936 aa15.32■□□□□ 0.04
PRPF40A-204ENST00000450303 ZNF550Q7Z398 422 aa15.32■□□□□ 0.04
PRPF40A-204ENST00000450303 HMGN2P46Q86SG4 172 aa15.32■□□□□ 0.04
PRPF40A-204ENST00000450303 LINC01560Q8TB33 94 aa15.32■□□□□ 0.04
PRPF40A-204ENST00000450303 SLC35B4Q969S0 331 aa15.32■□□□□ 0.04
PRPF40A-204ENST00000450303 DUS3LQ96G46 650 aaKnown RBP15.32■□□□□ 0.04
PRPF40A-204ENST00000450303 UCN2Q96RP3 112 aa15.32■□□□□ 0.04
PRPF40A-204ENST00000450303 DNAJB12Q9NXW2 375 aaKnown RBP15.32■□□□□ 0.04
PRPF40A-204ENST00000450303 AP4S1Q9Y587 144 aa15.32■□□□□ 0.04
PRPF40A-204ENST00000450303 SPG11Q96JI7 2443 aa15.31■□□□□ 0.04
PRPF40A-204ENST00000450303 CDHR4A6H8M9 788 aa15.31■□□□□ 0.04
PRPF40A-204ENST00000450303 HCRTR2O43614 444 aa15.31■□□□□ 0.04
PRPF40A-204ENST00000450303 PRKD3O94806 890 aa15.31■□□□□ 0.04
PRPF40A-204ENST00000450303 LGI1O95970 557 aa15.31■□□□□ 0.04
PRPF40A-204ENST00000450303 GPIP06744 558 aa15.31■□□□□ 0.04
PRPF40A-204ENST00000450303 CD247P20963 164 aa15.31■□□□□ 0.04
PRPF40A-204ENST00000450303 PSMA4P25789 261 aaKnown RBP15.31■□□□□ 0.04
PRPF40A-204ENST00000450303 SLC7A1P30825 629 aa15.31■□□□□ 0.04
PRPF40A-204ENST00000450303 CLDN20P56880 219 aa15.31■□□□□ 0.04
PRPF40A-204ENST00000450303 EEF1A1P68104 462 aaKnown RBP15.31■□□□□ 0.04
PRPF40A-204ENST00000450303 CHRNB3Q05901 458 aa15.31■□□□□ 0.04
PRPF40A-204ENST00000450303 DUSP7Q16829 419 aa15.31■□□□□ 0.04
PRPF40A-204ENST00000450303 FAM98BQ52LJ0 330 aaKnown RBP15.31■□□□□ 0.04
PRPF40A-204ENST00000450303 OGFRL1Q5TC84 451 aaPredicted RBP15.31■□□□□ 0.04
PRPF40A-204ENST00000450303 MEIOBQ8N635 442 aa15.31■□□□□ 0.04
PRPF40A-204ENST00000450303 GEMIN6Q8WXD5 167 aaKnown RBP15.31■□□□□ 0.04
PRPF40A-204ENST00000450303 SH3YL1Q96HL8 342 aaPredicted RBP15.31■□□□□ 0.04
PRPF40A-204ENST00000450303 HSH2DQ96JZ2 352 aa15.31■□□□□ 0.04
PRPF40A-204ENST00000450303 NPAS1Q99742 590 aa15.31■□□□□ 0.04
PRPF40A-204ENST00000450303 KLHDC3Q9BQ90 382 aa15.31■□□□□ 0.04
PRPF40A-204ENST00000450303 PIGQQ9BRB3 760 aa15.31■□□□□ 0.04
PRPF40A-204ENST00000450303 RBM24Q9BX46 236 aaKnown RBP15.31■□□□□ 0.04
PRPF40A-204ENST00000450303 LAT2Q9GZY6 243 aa15.31■□□□□ 0.04
PRPF40A-204ENST00000450303 MAGIXQ9H6Y5 334 aa15.31■□□□□ 0.04
PRPF40A-204ENST00000450303 JKAMPQ9P055 326 aa15.31■□□□□ 0.04
PRPF40A-204ENST00000450303 SCOCQ9UIL1 159 aa15.31■□□□□ 0.04
PRPF40A-204ENST00000450303 FOXD3Q9UJU5 478 aaPredicted RBP15.31■□□□□ 0.04
PRPF40A-204ENST00000450303 IGLV3-32A0A0A0MS00 114 aa15.3■□□□□ 0.04
PRPF40A-204ENST00000450303 CENPVL1A0A0U1RR11 272 aa15.3■□□□□ 0.04
PRPF40A-204ENST00000450303 TCRBV3S1A0A5B6 114 aa15.3■□□□□ 0.04
PRPF40A-204ENST00000450303 MAGEA13PA6NCF6 341 aa15.3■□□□□ 0.04
PRPF40A-204ENST00000450303 TPST1O60507 370 aa15.3■□□□□ 0.04
PRPF40A-204ENST00000450303 CTAG2O75638 210 aa15.3■□□□□ 0.04
PRPF40A-204ENST00000450303 CYP7B1O75881 506 aa15.3■□□□□ 0.04
PRPF40A-204ENST00000450303 OPN1LWP04000 364 aa15.3■□□□□ 0.04
PRPF40A-204ENST00000450303 UQCRBP14927 111 aa15.3■□□□□ 0.04
PRPF40A-204ENST00000450303 SLC6A8P48029 635 aa15.3■□□□□ 0.04
PRPF40A-204ENST00000450303 CRYBA2P53672 197 aa15.3■□□□□ 0.04
PRPF40A-204ENST00000450303 BLMHQ13867 455 aa15.3■□□□□ 0.04
PRPF40A-204ENST00000450303 TMCO5AQ8N6Q1 288 aa15.3■□□□□ 0.04
PRPF40A-204ENST00000450303 TOR1AIP2Q8NFQ8 470 aa15.3■□□□□ 0.04
PRPF40A-204ENST00000450303 B4GALNT2Q8NHY0 566 aa15.3■□□□□ 0.04
PRPF40A-204ENST00000450303 SLC47A1Q96FL8 570 aa15.3■□□□□ 0.04
PRPF40A-204ENST00000450303 ZNF845Q96IR2 970 aaPredicted RBP15.3■□□□□ 0.04
PRPF40A-204ENST00000450303 ZFP3Q96NJ6 502 aa15.3■□□□□ 0.04
PRPF40A-204ENST00000450303 SFXN3Q9BWM7 321 aa15.3■□□□□ 0.04
PRPF40A-204ENST00000450303 POLDIP3Q9BY77 421 aaKnown RBP15.3■□□□□ 0.04
PRPF40A-204ENST00000450303 YY1AP1Q9H869 796 aa15.3■□□□□ 0.04
PRPF40A-204ENST00000450303 EXOSC3Q9NQT5 275 aaKnown RBP15.3■□□□□ 0.04
PRPF40A-204ENST00000450303 SH3GLB1Q9Y371 365 aa15.3■□□□□ 0.04
PRPF40A-204ENST00000450303 V9GYQ6 96 aa15.3■□□□□ 0.04
PRPF40A-204ENST00000450303 A0A1W2PNV4 684 aa15.29■□□□□ 0.04
PRPF40A-204ENST00000450303 TCRBV5S2A0A599 114 aa15.29■□□□□ 0.04
PRPF40A-204ENST00000450303 DHRS12A0PJE2 317 aa15.29■□□□□ 0.04
PRPF40A-204ENST00000450303 TUBAL3A6NHL2 446 aa15.29■□□□□ 0.04
PRPF40A-204ENST00000450303 SLC22A20A6NK97 555 aa15.29■□□□□ 0.04
PRPF40A-204ENST00000450303 AP3D1O14617 1153 aa15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 78.5 ms