RNA–Protein interactions for RNA: ENST00000449537.1

AC004540.1-204, humanhuman

TSL 2 BASIC

Gene AC004540.1, Length 727 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004540.1-204ENST00000449537 IGHV1-18A0A0C4DH31 117 aa10.85□□□□□ -0.67
AC004540.1-204ENST00000449537 TMEM129A0AVI4 362 aa10.85□□□□□ -0.67
AC004540.1-204ENST00000449537 GXYLT2A0PJZ3 443 aa10.85□□□□□ -0.67
AC004540.1-204ENST00000449537 SHOX2O60902 331 aaPredicted RBP10.85□□□□□ -0.67
AC004540.1-204ENST00000449537 NUDT14O95848 222 aa10.85□□□□□ -0.67
AC004540.1-204ENST00000449537 NGFRP08138 427 aa10.85□□□□□ -0.67
AC004540.1-204ENST00000449537 NEFHP12036 1026 aa10.85□□□□□ -0.67
AC004540.1-204ENST00000449537 HPGDP15428 266 aa10.85□□□□□ -0.67
AC004540.1-204ENST00000449537 CHN1P15882 459 aa10.85□□□□□ -0.67
AC004540.1-204ENST00000449537 ACHEP22303 614 aa10.85□□□□□ -0.67
AC004540.1-204ENST00000449537 PCGF2P35227 344 aa10.85□□□□□ -0.67
AC004540.1-204ENST00000449537 PRIM2P49643 509 aa10.85□□□□□ -0.67
AC004540.1-204ENST00000449537 GYS2P54840 703 aa10.85□□□□□ -0.67
AC004540.1-204ENST00000449537 PKNOX1P55347 436 aa10.85□□□□□ -0.67
AC004540.1-204ENST00000449537 GTF2H2Q13888 395 aa10.85□□□□□ -0.67
AC004540.1-204ENST00000449537 PDK3Q15120 406 aa10.85□□□□□ -0.67
AC004540.1-204ENST00000449537 TUSC1Q2TAM9 212 aa10.85□□□□□ -0.67
AC004540.1-204ENST00000449537 SLC9B1Q4ZJI4 515 aa10.85□□□□□ -0.67
AC004540.1-204ENST00000449537 SGO1Q5FBB7 561 aa10.85□□□□□ -0.67
AC004540.1-204ENST00000449537 ELFN2Q5R3F8 820 aa10.85□□□□□ -0.67
AC004540.1-204ENST00000449537 SAXO2Q658L1 398 aa10.85□□□□□ -0.67
AC004540.1-204ENST00000449537 GTF2H2CQ6P1K8 395 aa10.85□□□□□ -0.67
AC004540.1-204ENST00000449537 BRICD5Q6PL45 260 aa10.85□□□□□ -0.67
AC004540.1-204ENST00000449537 C10orf107Q8IVU9 208 aa10.85□□□□□ -0.67
AC004540.1-204ENST00000449537 OR52E4Q8NGH9 312 aa10.85□□□□□ -0.67
AC004540.1-204ENST00000449537 CEP70Q8NHQ1 597 aa10.85□□□□□ -0.67
AC004540.1-204ENST00000449537 ZNF483Q8TF39 744 aaPredicted RBP10.85□□□□□ -0.67
AC004540.1-204ENST00000449537 WFDC12Q8WWY7 111 aa10.85□□□□□ -0.67
AC004540.1-204ENST00000449537 ATP6V1E2Q96A05 226 aa10.85□□□□□ -0.67
AC004540.1-204ENST00000449537 PHF21BQ96EK2 531 aa10.85□□□□□ -0.67
AC004540.1-204ENST00000449537 ANKRD27Q96NW4 1050 aa10.85□□□□□ -0.67
AC004540.1-204ENST00000449537 SLC38A2Q96QD8 506 aa10.85□□□□□ -0.67
AC004540.1-204ENST00000449537 BBS4Q96RK4 519 aa10.85□□□□□ -0.67
AC004540.1-204ENST00000449537 CITED1Q99966 193 aa10.85□□□□□ -0.67
AC004540.1-204ENST00000449537 LMF2Q9BU23 707 aaKnown RBP10.85□□□□□ -0.67
AC004540.1-204ENST00000449537 KRTAP17-1Q9BYP8 105 aa10.85□□□□□ -0.67
AC004540.1-204ENST00000449537 SLC35C2Q9NQQ7 365 aa10.85□□□□□ -0.67
AC004540.1-204ENST00000449537 UPB1Q9UBR1 384 aa10.85□□□□□ -0.67
AC004540.1-204ENST00000449537 TESQ9UGI8 421 aaKnown RBP10.85□□□□□ -0.67
AC004540.1-204ENST00000449537 DCTN4Q9UJW0 460 aa10.85□□□□□ -0.67
AC004540.1-204ENST00000449537 ICAM5Q9UMF0 924 aa10.85□□□□□ -0.67
AC004540.1-204ENST00000449537 GPC6Q9Y625 555 aaPredicted RBP10.85□□□□□ -0.67
AC004540.1-204ENST00000449537 TTC36A6NLP5 189 aa10.84□□□□□ -0.67
AC004540.1-204ENST00000449537 CLDN34H7C241 214 aa10.84□□□□□ -0.67
AC004540.1-204ENST00000449537 PDLIM1O00151 329 aa10.84□□□□□ -0.67
AC004540.1-204ENST00000449537 GPR171O14626 319 aa10.84□□□□□ -0.67
AC004540.1-204ENST00000449537 PPIHO43447 177 aaKnown RBP10.84□□□□□ -0.67
AC004540.1-204ENST00000449537 SUPT7LO94864 414 aa10.84□□□□□ -0.67
AC004540.1-204ENST00000449537 FSHBP01225 129 aa10.84□□□□□ -0.67
AC004540.1-204ENST00000449537 ENO1P06733 434 aaKnown RBP10.84□□□□□ -0.67
AC004540.1-204ENST00000449537 IGFBP1P08833 259 aaPredicted RBP10.84□□□□□ -0.67
AC004540.1-204ENST00000449537 ALDH3A1P30838 453 aa10.84□□□□□ -0.67
AC004540.1-204ENST00000449537 NTF4P34130 210 aa10.84□□□□□ -0.67
AC004540.1-204ENST00000449537 THBS4P35443 961 aa10.84□□□□□ -0.67
AC004540.1-204ENST00000449537 CLCQ05315 142 aa10.84□□□□□ -0.67
AC004540.1-204ENST00000449537 IFT88Q13099 833 aa10.84□□□□□ -0.67
AC004540.1-204ENST00000449537 GALNT18Q6P9A2 607 aa10.84□□□□□ -0.67
AC004540.1-204ENST00000449537 REC114Q7Z4M0 266 aa10.84□□□□□ -0.67
AC004540.1-204ENST00000449537 GOLGA7Q7Z5G4 137 aa10.84□□□□□ -0.67
AC004540.1-204ENST00000449537 TREML1Q86YW5 311 aa10.84□□□□□ -0.67
AC004540.1-204ENST00000449537 KIR3DL3Q8N743 410 aa10.84□□□□□ -0.67
AC004540.1-204ENST00000449537 GPR151Q8TDV0 419 aa10.84□□□□□ -0.67
AC004540.1-204ENST00000449537 CKAP2Q8WWK9 683 aa10.84□□□□□ -0.67
AC004540.1-204ENST00000449537 RDH5Q92781 318 aa10.84□□□□□ -0.67
AC004540.1-204ENST00000449537 CDK15Q96Q40 435 aa10.84□□□□□ -0.67
AC004540.1-204ENST00000449537 OR5B2Q96R09 309 aa10.84□□□□□ -0.67
AC004540.1-204ENST00000449537 TPK1Q9H3S4 243 aa10.84□□□□□ -0.67
AC004540.1-204ENST00000449537 ZNF442Q9H7R0 627 aa10.84□□□□□ -0.67
AC004540.1-204ENST00000449537 BEX1Q9HBH7 125 aa10.84□□□□□ -0.67
AC004540.1-204ENST00000449537 UPK1AO00322 258 aa10.83□□□□□ -0.68
AC004540.1-204ENST00000449537 PRB2P02812 416 aaPredicted RBP10.83□□□□□ -0.68
AC004540.1-204ENST00000449537 PAX7P23759 505 aa10.83□□□□□ -0.68
AC004540.1-204ENST00000449537 GATA3P23771 443 aa10.83□□□□□ -0.68
AC004540.1-204ENST00000449537 LSP1P33241 339 aa10.83□□□□□ -0.68
AC004540.1-204ENST00000449537 CCNG1P51959 295 aa10.83□□□□□ -0.68
AC004540.1-204ENST00000449537 WDR4P57081 412 aaKnown RBP10.83□□□□□ -0.68
AC004540.1-204ENST00000449537 NAAAQ02083 359 aa10.83□□□□□ -0.68
AC004540.1-204ENST00000449537 GUCY1A3Q02108 690 aa10.83□□□□□ -0.68
AC004540.1-204ENST00000449537 SELENBP1Q13228 472 aa10.83□□□□□ -0.68
AC004540.1-204ENST00000449537 MPP2Q14168 576 aa10.83□□□□□ -0.68
AC004540.1-204ENST00000449537 SLC9A3R2Q15599 337 aa10.83□□□□□ -0.68
AC004540.1-204ENST00000449537 ASPHD2Q6ICH7 369 aa10.83□□□□□ -0.68
AC004540.1-204ENST00000449537 ANKRD16Q6P6B7 361 aa10.83□□□□□ -0.68
AC004540.1-204ENST00000449537 RNF165Q6ZSG1 346 aa10.83□□□□□ -0.68
AC004540.1-204ENST00000449537 MTDHQ86UE4 582 aaKnown RBP10.83□□□□□ -0.68
AC004540.1-204ENST00000449537 ZNF527Q8NB42 609 aa10.83□□□□□ -0.68
AC004540.1-204ENST00000449537 NUP37Q8NFH4 326 aa10.83□□□□□ -0.68
AC004540.1-204ENST00000449537 OR6Y1Q8NGX8 325 aa10.83□□□□□ -0.68
AC004540.1-204ENST00000449537 MGARPQ8TDB4 240 aa10.83□□□□□ -0.68
AC004540.1-204ENST00000449537 LRRC8CQ8TDW0 803 aa10.83□□□□□ -0.68
AC004540.1-204ENST00000449537 PIK3R3Q92569 461 aa10.83□□□□□ -0.68
AC004540.1-204ENST00000449537 MAGEB18Q96M61 343 aa10.83□□□□□ -0.68
AC004540.1-204ENST00000449537 CCT7Q99832 543 aa10.83□□□□□ -0.68
AC004540.1-204ENST00000449537 PAIP2Q9BPZ3 127 aaKnown RBP10.83□□□□□ -0.68
AC004540.1-204ENST00000449537 GSTO2Q9H4Y5 243 aa10.83□□□□□ -0.68
AC004540.1-204ENST00000449537 CCDC134Q9H6E4 229 aa10.83□□□□□ -0.68
AC004540.1-204ENST00000449537 ZNF665Q9H7R5 613 aa10.83□□□□□ -0.68
AC004540.1-204ENST00000449537 NOL11Q9H8H0 719 aaKnown RBP10.83□□□□□ -0.68
AC004540.1-204ENST00000449537 OBP2BQ9NPH6 170 aa10.83□□□□□ -0.68
AC004540.1-204ENST00000449537 UBQLN4Q9NRR5 601 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms