RNA–Protein interactions for RNA: ENST00000441438.2

SYNE2-206, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best)

Gene SYNE2, Length 3,084 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-206ENST00000441438 SF3A2Q15428 464 aaKnown RBP9.68□□□□□ -0.86
SYNE2-206ENST00000441438 OR2A2Q6IF42 318 aa9.68□□□□□ -0.86
SYNE2-206ENST00000441438 ZNF770Q6IQ21 691 aaPredicted RBP9.68□□□□□ -0.86
SYNE2-206ENST00000441438 SLC27A4Q6P1M0 643 aa9.68□□□□□ -0.86
SYNE2-206ENST00000441438 ATRAIDQ6UW56 229 aa9.68□□□□□ -0.86
SYNE2-206ENST00000441438 B3GLCTQ6Y288 498 aa9.68□□□□□ -0.86
SYNE2-206ENST00000441438 OR1M1Q8NGA1 313 aa9.68□□□□□ -0.86
SYNE2-206ENST00000441438 OR4A16Q8NH70 328 aa9.68□□□□□ -0.86
SYNE2-206ENST00000441438 C10orf82Q8WW14 230 aa9.68□□□□□ -0.86
SYNE2-206ENST00000441438 ZSWIM1Q9BR11 485 aa9.68□□□□□ -0.86
SYNE2-206ENST00000441438 VPS25Q9BRG1 176 aa9.68□□□□□ -0.86
SYNE2-206ENST00000441438 TMEM39BQ9GZU3 492 aa9.68□□□□□ -0.86
SYNE2-206ENST00000441438 KCNK15Q9H427 330 aa9.68□□□□□ -0.86
SYNE2-206ENST00000441438 ELOVL3Q9HB03 270 aa9.68□□□□□ -0.86
SYNE2-206ENST00000441438 PAK6Q9NQU5 681 aaPredicted RBP9.68□□□□□ -0.86
SYNE2-206ENST00000441438 SAGE2PA6NJ88 616 aa9.67□□□□□ -0.86
SYNE2-206ENST00000441438 EDF1O60869 148 aaKnown RBP9.67□□□□□ -0.86
SYNE2-206ENST00000441438 OR6A2O95222 327 aa9.67□□□□□ -0.86
SYNE2-206ENST00000441438 CREB1P16220 341 aa9.67□□□□□ -0.86
SYNE2-206ENST00000441438 LIMK2P53671 638 aa9.67□□□□□ -0.86
SYNE2-206ENST00000441438 OXA1LQ15070 435 aa9.67□□□□□ -0.86
SYNE2-206ENST00000441438 SIX1Q15475 284 aaPredicted RBP9.67□□□□□ -0.86
SYNE2-206ENST00000441438 ITPRIPL2Q3MIP1 535 aa9.67□□□□□ -0.86
SYNE2-206ENST00000441438 AADACL2Q6P093 401 aa9.67□□□□□ -0.86
SYNE2-206ENST00000441438 DOK6Q6PKX4 331 aa9.67□□□□□ -0.86
SYNE2-206ENST00000441438 SERPINA9Q86WD7 417 aa9.67□□□□□ -0.86
SYNE2-206ENST00000441438 PHOSPHO1Q8TCT1 267 aa9.67□□□□□ -0.86
SYNE2-206ENST00000441438 TMEM209Q96SK2 561 aa9.67□□□□□ -0.86
SYNE2-206ENST00000441438 EML4Q9HC35 981 aaKnown RBP9.67□□□□□ -0.86
SYNE2-206ENST00000441438 GHRLQ9UBU3 117 aa9.67□□□□□ -0.86
SYNE2-206ENST00000441438 COL4A6Q14031 1691 aa9.67□□□□□ -0.86
SYNE2-206ENST00000441438 FCGR3BO75015 233 aa9.67□□□□□ -0.86
SYNE2-206ENST00000441438 PAK4O96013 591 aaPredicted RBP9.67□□□□□ -0.86
SYNE2-206ENST00000441438 LHCGRP22888 699 aa9.67□□□□□ -0.86
SYNE2-206ENST00000441438 CD200P41217 278 aa9.67□□□□□ -0.86
SYNE2-206ENST00000441438 MAGEA12P43365 314 aa9.67□□□□□ -0.86
SYNE2-206ENST00000441438 KIR3DL1P43629 444 aa9.67□□□□□ -0.86
SYNE2-206ENST00000441438 SLC6A9P48067 706 aa9.67□□□□□ -0.86
SYNE2-206ENST00000441438 COPZ1P61923 177 aa9.67□□□□□ -0.86
SYNE2-206ENST00000441438 SKP2Q13309 424 aa9.67□□□□□ -0.86
SYNE2-206ENST00000441438 GPAT4Q86UL3 456 aa9.67□□□□□ -0.86
SYNE2-206ENST00000441438 GLB1L2Q8IW92 636 aa9.67□□□□□ -0.86
SYNE2-206ENST00000441438 OR4K2Q8NGD2 314 aa9.67□□□□□ -0.86
SYNE2-206ENST00000441438 WIPF2Q8TF74 440 aaPredicted RBP9.67□□□□□ -0.86
SYNE2-206ENST00000441438 EXTL1Q92935 676 aa9.67□□□□□ -0.86
SYNE2-206ENST00000441438 GLYATL1Q969I3 302 aa9.67□□□□□ -0.86
SYNE2-206ENST00000441438 AIF1LQ9BQI0 150 aa9.67□□□□□ -0.86
SYNE2-206ENST00000441438 FKRPQ9H9S5 495 aa9.67□□□□□ -0.86
SYNE2-206ENST00000441438 NMNAT1Q9HAN9 279 aaPredicted RBP9.67□□□□□ -0.86
SYNE2-206ENST00000441438 KCNK9Q9NPC2 374 aa9.67□□□□□ -0.86
SYNE2-206ENST00000441438 ZNF223Q9UK11 482 aaPredicted RBP9.67□□□□□ -0.86
SYNE2-206ENST00000441438 MYH11P35749 1972 aa9.67□□□□□ -0.86
SYNE2-206ENST00000441438 CEACAM4O75871 244 aa9.67□□□□□ -0.86
SYNE2-206ENST00000441438 TNFAIP8O95379 198 aa9.67□□□□□ -0.86
SYNE2-206ENST00000441438 TSPAN8P19075 237 aa9.67□□□□□ -0.86
SYNE2-206ENST00000441438 CD72P21854 359 aa9.67□□□□□ -0.86
SYNE2-206ENST00000441438 PROZP22891 400 aa9.67□□□□□ -0.86
SYNE2-206ENST00000441438 SLC7A9P82251 487 aa9.67□□□□□ -0.86
SYNE2-206ENST00000441438 BNIP3Q12983 259 aa9.67□□□□□ -0.86
SYNE2-206ENST00000441438 SRSF6Q13247 344 aaKnown RBP9.67□□□□□ -0.86
SYNE2-206ENST00000441438 CDO1Q16878 200 aa9.67□□□□□ -0.86
SYNE2-206ENST00000441438 LEMD1Q68G75 181 aa9.67□□□□□ -0.86
SYNE2-206ENST00000441438 Q6ZVU0 165 aa9.67□□□□□ -0.86
SYNE2-206ENST00000441438 ABHD13Q7L211 337 aa9.67□□□□□ -0.86
SYNE2-206ENST00000441438 OR13H1Q8NG92 308 aa9.67□□□□□ -0.86
SYNE2-206ENST00000441438 OR4K15Q8NH41 348 aa9.67□□□□□ -0.86
SYNE2-206ENST00000441438 TMEM239Q8WW34 195 aa9.67□□□□□ -0.86
SYNE2-206ENST00000441438 NTNG2Q96CW9 530 aa9.67□□□□□ -0.86
SYNE2-206ENST00000441438 WFDC1Q9HC57 220 aa9.67□□□□□ -0.86
SYNE2-206ENST00000441438 ACSS2Q9NR19 701 aa9.67□□□□□ -0.86
SYNE2-206ENST00000441438 B3GNT2Q9NY97 397 aa9.67□□□□□ -0.86
SYNE2-206ENST00000441438 EMCNQ9ULC0 261 aa9.67□□□□□ -0.86
SYNE2-206ENST00000441438 YIPF1Q9Y548 306 aa9.67□□□□□ -0.86
SYNE2-206ENST00000441438 ASTN1O14525 1302 aa9.66□□□□□ -0.86
SYNE2-206ENST00000441438 A0A0G2JLL6 359 aaPredicted RBP9.66□□□□□ -0.86
SYNE2-206ENST00000441438 MBD3L4A6NDZ8 208 aaPredicted RBP9.66□□□□□ -0.86
SYNE2-206ENST00000441438 MBD3L3A6NE82 208 aaPredicted RBP9.66□□□□□ -0.86
SYNE2-206ENST00000441438 MSI1O43347 362 aaKnown RBP9.66□□□□□ -0.86
SYNE2-206ENST00000441438 SIGLEC6O43699 453 aa9.66□□□□□ -0.86
SYNE2-206ENST00000441438 CYP7B1O75881 506 aa9.66□□□□□ -0.86
SYNE2-206ENST00000441438 UTS2O95399 124 aa9.66□□□□□ -0.86
SYNE2-206ENST00000441438 MT-CYBP00156 380 aaPredicted RBP9.66□□□□□ -0.86
SYNE2-206ENST00000441438 GOT2P00505 430 aaKnown RBP9.66□□□□□ -0.86
SYNE2-206ENST00000441438 C8AP07357 584 aa9.66□□□□□ -0.86
SYNE2-206ENST00000441438 APRTP07741 180 aa9.66□□□□□ -0.86
SYNE2-206ENST00000441438 PNPLA4P41247 253 aa9.66□□□□□ -0.86
SYNE2-206ENST00000441438 AKR1C3P42330 323 aa9.66□□□□□ -0.86
SYNE2-206ENST00000441438 RFX3P48380 749 aa9.66□□□□□ -0.86
SYNE2-206ENST00000441438 WDR4P57081 412 aaKnown RBP9.66□□□□□ -0.86
SYNE2-206ENST00000441438 RPE65Q16518 533 aa9.66□□□□□ -0.86
SYNE2-206ENST00000441438 PTPN20Q4JDL3 420 aa9.66□□□□□ -0.86
SYNE2-206ENST00000441438 SLC22A6Q4U2R8 563 aa9.66□□□□□ -0.86
SYNE2-206ENST00000441438 OR2G6Q5TZ20 316 aa9.66□□□□□ -0.86
SYNE2-206ENST00000441438 SCARA3Q6AZY7 606 aa9.66□□□□□ -0.86
SYNE2-206ENST00000441438 MED27Q6P2C8 311 aa9.66□□□□□ -0.86
SYNE2-206ENST00000441438 FIGNL1Q6PIW4 674 aa9.66□□□□□ -0.86
SYNE2-206ENST00000441438 GRINAQ7Z429 371 aa9.66□□□□□ -0.86
SYNE2-206ENST00000441438 PRRT2Q7Z6L0 340 aaPredicted RBP9.66□□□□□ -0.86
SYNE2-206ENST00000441438 NLGN4XQ8N0W4 816 aa9.66□□□□□ -0.86
SYNE2-206ENST00000441438 OR10S1Q8NGN2 331 aa9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms