RNA–Protein interactions for RNA: ENST00000439369.6

SCLT1-202, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 966 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-202ENST00000439369 FPR3P25089 353 aa11.43□□□□□ -0.58
SCLT1-202ENST00000439369 IDUAP35475 653 aa11.43□□□□□ -0.58
SCLT1-202ENST00000439369 UGT2B15P54855 530 aa11.43□□□□□ -0.58
SCLT1-202ENST00000439369 EGR4Q05215 589 aa11.43□□□□□ -0.58
SCLT1-202ENST00000439369 COX10Q12887 443 aa11.43□□□□□ -0.58
SCLT1-202ENST00000439369 SEC23BQ15437 767 aa11.43□□□□□ -0.58
SCLT1-202ENST00000439369 ANKDD1AQ495B1 522 aa11.43□□□□□ -0.58
SCLT1-202ENST00000439369 PDSS1Q5T2R2 415 aa11.43□□□□□ -0.58
SCLT1-202ENST00000439369 C1orf94Q6P1W5 598 aa11.43□□□□□ -0.58
SCLT1-202ENST00000439369 ARHGAP11AQ6P4F7 1023 aa11.43□□□□□ -0.58
SCLT1-202ENST00000439369 FAHD1Q6P587 224 aa11.43□□□□□ -0.58
SCLT1-202ENST00000439369 POMZP3Q6PJE2 187 aa11.43□□□□□ -0.58
SCLT1-202ENST00000439369 CD300LDQ6UXZ3 194 aa11.43□□□□□ -0.58
SCLT1-202ENST00000439369 ESPNLQ6ZVH7 1005 aa11.43□□□□□ -0.58
SCLT1-202ENST00000439369 NRMQ8IXM6 262 aa11.43□□□□□ -0.58
SCLT1-202ENST00000439369 GHDCQ8N2G8 530 aa11.43□□□□□ -0.58
SCLT1-202ENST00000439369 PACRGLQ8N7B6 248 aa11.43□□□□□ -0.58
SCLT1-202ENST00000439369 OR10G2Q8NGC3 310 aa11.43□□□□□ -0.58
SCLT1-202ENST00000439369 MFSD8Q8NHS3 518 aa11.43□□□□□ -0.58
SCLT1-202ENST00000439369 FAR1Q8WVX9 515 aa11.43□□□□□ -0.58
SCLT1-202ENST00000439369 SLC39A7Q92504 469 aa11.43□□□□□ -0.58
SCLT1-202ENST00000439369 ABTB1Q969K4 478 aaPredicted RBP11.43□□□□□ -0.58
SCLT1-202ENST00000439369 BPIFA2Q96DR5 249 aa11.43□□□□□ -0.58
SCLT1-202ENST00000439369 KLHL15Q96M94 604 aa11.43□□□□□ -0.58
SCLT1-202ENST00000439369 GPR137Q96N19 417 aa11.43□□□□□ -0.58
SCLT1-202ENST00000439369 DEFB127Q9H1M4 99 aa11.43□□□□□ -0.58
SCLT1-202ENST00000439369 SEMA6AQ9H2E6 1030 aa11.43□□□□□ -0.58
SCLT1-202ENST00000439369 LDAHQ9H6V9 325 aa11.43□□□□□ -0.58
SCLT1-202ENST00000439369 MEPEQ9NQ76 525 aaPredicted RBP11.43□□□□□ -0.58
SCLT1-202ENST00000439369 PAQR5Q9NXK6 330 aaPredicted RBP11.43□□□□□ -0.58
SCLT1-202ENST00000439369 USE1Q9NZ43 259 aa11.43□□□□□ -0.58
SCLT1-202ENST00000439369 PDP1Q9P0J1 537 aaPredicted RBP11.43□□□□□ -0.58
SCLT1-202ENST00000439369 OAZ3Q9UMX2 235 aa11.43□□□□□ -0.58
SCLT1-202ENST00000439369 PKD1L2Q7Z442 2459 aa11.42□□□□□ -0.58
SCLT1-202ENST00000439369 ENO4A6NNW6 628 aa11.42□□□□□ -0.58
SCLT1-202ENST00000439369 SHISA8B8ZZ34 492 aa11.42□□□□□ -0.58
SCLT1-202ENST00000439369 NPIPA5E9PKD4 350 aa11.42□□□□□ -0.58
SCLT1-202ENST00000439369 H3BML4 177 aa11.42□□□□□ -0.58
SCLT1-202ENST00000439369 KLF4O43474 513 aa11.42□□□□□ -0.58
SCLT1-202ENST00000439369 WISP1O95388 367 aa11.42□□□□□ -0.58
SCLT1-202ENST00000439369 PMS2P2O95744 297 aa11.42□□□□□ -0.58
SCLT1-202ENST00000439369 TFPIP10646 304 aa11.42□□□□□ -0.58
SCLT1-202ENST00000439369 IFI30P13284 250 aa11.42□□□□□ -0.58
SCLT1-202ENST00000439369 ZNF708P17019 499 aa11.42□□□□□ -0.58
SCLT1-202ENST00000439369 BMP7P18075 431 aa11.42□□□□□ -0.58
SCLT1-202ENST00000439369 IL11P20809 199 aa11.42□□□□□ -0.58
SCLT1-202ENST00000439369 GSTM3P21266 225 aa11.42□□□□□ -0.58
SCLT1-202ENST00000439369 FUT4P22083 530 aa11.42□□□□□ -0.58
SCLT1-202ENST00000439369 CBLP22681 906 aa11.42□□□□□ -0.58
SCLT1-202ENST00000439369 OMPP47874 163 aa11.42□□□□□ -0.58
SCLT1-202ENST00000439369 SLC9A3P48764 834 aa11.42□□□□□ -0.58
SCLT1-202ENST00000439369 LHX2P50458 406 aa11.42□□□□□ -0.58
SCLT1-202ENST00000439369 IST1P53990 364 aa11.42□□□□□ -0.58
SCLT1-202ENST00000439369 CSNK2A1P68400 391 aaPredicted RBP11.42□□□□□ -0.58
SCLT1-202ENST00000439369 FOXK1P85037 733 aa11.42□□□□□ -0.58
SCLT1-202ENST00000439369 CRYZQ08257 329 aaKnown RBP11.42□□□□□ -0.58
SCLT1-202ENST00000439369 LY6DQ14210 128 aa11.42□□□□□ -0.58
SCLT1-202ENST00000439369 TRIP10Q15642 601 aa11.42□□□□□ -0.58
SCLT1-202ENST00000439369 OGFRL1Q5TC84 451 aaPredicted RBP11.42□□□□□ -0.58
SCLT1-202ENST00000439369 PGBD2Q6P3X8 592 aa11.42□□□□□ -0.58
SCLT1-202ENST00000439369 TMEM179BQ7Z7N9 219 aa11.42□□□□□ -0.58
SCLT1-202ENST00000439369 GGNQ86UU5 652 aa11.42□□□□□ -0.58
SCLT1-202ENST00000439369 STK32CQ86UX6 486 aa11.42□□□□□ -0.58
SCLT1-202ENST00000439369 PM20D2Q8IYS1 436 aa11.42□□□□□ -0.58
SCLT1-202ENST00000439369 MEIOBQ8N635 442 aa11.42□□□□□ -0.58
SCLT1-202ENST00000439369 ICA1LQ8NDH6 482 aa11.42□□□□□ -0.58
SCLT1-202ENST00000439369 OR5M1Q8NGP8 315 aa11.42□□□□□ -0.58
SCLT1-202ENST00000439369 GNPDA2Q8TDQ7 276 aa11.42□□□□□ -0.58
SCLT1-202ENST00000439369 MIB2Q96AX9 1013 aa11.42□□□□□ -0.58
SCLT1-202ENST00000439369 EME1Q96AY2 570 aa11.42□□□□□ -0.58
SCLT1-202ENST00000439369 SARAFQ96BY9 339 aa11.42□□□□□ -0.58
SCLT1-202ENST00000439369 SGTBQ96EQ0 304 aa11.42□□□□□ -0.58
SCLT1-202ENST00000439369 RBM4BQ9BQ04 359 aaKnown RBP11.42□□□□□ -0.58
SCLT1-202ENST00000439369 SLX1AQ9BQ83 275 aa11.42□□□□□ -0.58
SCLT1-202ENST00000439369 RBM4Q9BWF3 364 aaKnown RBP11.42□□□□□ -0.58
SCLT1-202ENST00000439369 VCX3BQ9H321 246 aa11.42□□□□□ -0.58
SCLT1-202ENST00000439369 EXO5Q9H790 373 aa11.42□□□□□ -0.58
SCLT1-202ENST00000439369 FKRPQ9H9S5 495 aa11.42□□□□□ -0.58
SCLT1-202ENST00000439369 ZNF556Q9HAH1 456 aa11.42□□□□□ -0.58
SCLT1-202ENST00000439369 TIGARQ9NQ88 270 aa11.42□□□□□ -0.58
SCLT1-202ENST00000439369 NKX1-2Q9UD57 310 aaPredicted RBP11.42□□□□□ -0.58
SCLT1-202ENST00000439369 ENOPH1Q9UHY7 261 aa11.42□□□□□ -0.58
SCLT1-202ENST00000439369 ZNF229Q9UJW7 825 aa11.42□□□□□ -0.58
SCLT1-202ENST00000439369 NPIPA1Q9UND3 350 aa11.42□□□□□ -0.58
SCLT1-202ENST00000439369 CORINQ9Y5Q5 1042 aa11.42□□□□□ -0.58
SCLT1-202ENST00000439369 ZC3H12DA2A288 527 aaKnown RBP11.41□□□□□ -0.58
SCLT1-202ENST00000439369 SAC3D1A6NKF1 404 aa11.41□□□□□ -0.58
SCLT1-202ENST00000439369 FTCDNL1E5RQL4 147 aa11.41□□□□□ -0.58
SCLT1-202ENST00000439369 BCKDKO14874 412 aa11.41□□□□□ -0.58
SCLT1-202ENST00000439369 EIF1BO60739 113 aaKnown RBP11.41□□□□□ -0.58
SCLT1-202ENST00000439369 OR7A10O76100 309 aa11.41□□□□□ -0.58
SCLT1-202ENST00000439369 BGLAPP02818 100 aa11.41□□□□□ -0.58
SCLT1-202ENST00000439369 CCNA2P20248 432 aa11.41□□□□□ -0.58
SCLT1-202ENST00000439369 TCEA1P23193 301 aaKnown RBP11.41□□□□□ -0.58
SCLT1-202ENST00000439369 GSSP48637 474 aa11.41□□□□□ -0.58
SCLT1-202ENST00000439369 CLDN18P56856 261 aa11.41□□□□□ -0.58
SCLT1-202ENST00000439369 RPS3AP61247 264 aaKnown RBP11.41□□□□□ -0.58
SCLT1-202ENST00000439369 PPP2R2BQ00005 443 aa11.41□□□□□ -0.58
SCLT1-202ENST00000439369 TSPAN31Q12999 210 aa11.41□□□□□ -0.58
SCLT1-202ENST00000439369 MYBPHQ13203 477 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms