RNA–Protein interactions for RNA: ENST00000433892.6

CD44-209, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 2,292 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-209ENST00000433892 CELA2BP08218 269 aaPredicted RBP10.86□□□□□ -0.67
CD44-209ENST00000433892 SLC35E2P0CK97 266 aa10.86□□□□□ -0.67
CD44-209ENST00000433892 EPXP11678 715 aa10.86□□□□□ -0.67
CD44-209ENST00000433892 TYRP1P17643 537 aa10.86□□□□□ -0.67
CD44-209ENST00000433892 EN2P19622 333 aaPredicted RBP10.86□□□□□ -0.67
CD44-209ENST00000433892 S1PR1P21453 382 aa10.86□□□□□ -0.67
CD44-209ENST00000433892 GDI2P50395 445 aaKnown RBP10.86□□□□□ -0.67
CD44-209ENST00000433892 DGCR2P98153 550 aa10.86□□□□□ -0.67
CD44-209ENST00000433892 POU4F2Q12837 409 aa10.86□□□□□ -0.67
CD44-209ENST00000433892 MTFR2Q6P444 385 aa10.86□□□□□ -0.67
CD44-209ENST00000433892 ZNRF4Q8WWF5 429 aa10.86□□□□□ -0.67
CD44-209ENST00000433892 PDCD1LG2Q9BQ51 273 aa10.86□□□□□ -0.67
CD44-209ENST00000433892 MED28Q9H204 178 aa10.86□□□□□ -0.67
CD44-209ENST00000433892 FAM60AQ9NP50 221 aa10.86□□□□□ -0.67
CD44-209ENST00000433892 CHRNA9Q9UGM1 479 aa10.86□□□□□ -0.67
CD44-209ENST00000433892 SERTAD3Q9UJW9 196 aa10.86□□□□□ -0.67
CD44-209ENST00000433892 SCML1Q9UN30 329 aa10.86□□□□□ -0.67
CD44-209ENST00000433892 NPFFR2Q9Y5X5 522 aa10.86□□□□□ -0.67
CD44-209ENST00000433892 SPTBP11277 2137 aa10.85□□□□□ -0.67
CD44-209ENST00000433892 TICRRQ7Z2Z1 1910 aa10.85□□□□□ -0.67
CD44-209ENST00000433892 OR2W5A6NFC9 320 aa10.85□□□□□ -0.67
CD44-209ENST00000433892 EPOPA6NHQ4 379 aa10.85□□□□□ -0.67
CD44-209ENST00000433892 NOTOA8MTQ0 251 aa10.85□□□□□ -0.67
CD44-209ENST00000433892 DHFRP00374 187 aa10.85□□□□□ -0.67
CD44-209ENST00000433892 RBM34P42696 430 aaKnown RBP10.85□□□□□ -0.67
CD44-209ENST00000433892 GNG2P59768 71 aa10.85□□□□□ -0.67
CD44-209ENST00000433892 CDK5R1Q15078 307 aa10.85□□□□□ -0.67
CD44-209ENST00000433892 ZNHIT3Q15649 155 aaPredicted RBP10.85□□□□□ -0.67
CD44-209ENST00000433892 CEP78Q5JTW2 689 aa10.85□□□□□ -0.67
CD44-209ENST00000433892 GRAMD2AQ8IUY3 354 aa10.85□□□□□ -0.67
CD44-209ENST00000433892 SIAH3Q8IW03 269 aa10.85□□□□□ -0.67
CD44-209ENST00000433892 TOMM5Q8N4H5 51 aa10.85□□□□□ -0.67
CD44-209ENST00000433892 LSMEM1Q8N8F7 131 aa10.85□□□□□ -0.67
CD44-209ENST00000433892 TEX19Q8NA77 164 aa10.85□□□□□ -0.67
CD44-209ENST00000433892 SNX33Q8WV41 574 aa10.85□□□□□ -0.67
CD44-209ENST00000433892 YIPF5Q969M3 257 aa10.85□□□□□ -0.67
CD44-209ENST00000433892 SMIM19Q96E16 107 aa10.85□□□□□ -0.67
CD44-209ENST00000433892 OR14A2Q96R54 314 aa10.85□□□□□ -0.67
CD44-209ENST00000433892 CNN2Q99439 309 aaKnown RBP10.85□□□□□ -0.67
CD44-209ENST00000433892 ORAI3Q9BRQ5 295 aa10.85□□□□□ -0.67
CD44-209ENST00000433892 GSDMCQ9BYG8 508 aa10.85□□□□□ -0.67
CD44-209ENST00000433892 FBRSQ9HAH7 460 aa10.85□□□□□ -0.67
CD44-209ENST00000433892 GNG8Q9UK08 70 aa10.85□□□□□ -0.67
CD44-209ENST00000433892 AK6Q9Y3D8 172 aaKnown RBP10.85□□□□□ -0.67
CD44-209ENST00000433892 ENTPD2Q9Y5L3 495 aa10.85□□□□□ -0.67
CD44-209ENST00000433892 TRAV1-2A0A0B4J238 106 aa10.84□□□□□ -0.67
CD44-209ENST00000433892 TRBV2A0A0J9YWF9 115 aa10.84□□□□□ -0.67
CD44-209ENST00000433892 OGG1O15527 345 aa10.84□□□□□ -0.67
CD44-209ENST00000433892 FLRT2O43155 660 aa10.84□□□□□ -0.67
CD44-209ENST00000433892 NDUFB2O95178 105 aa10.84□□□□□ -0.67
CD44-209ENST00000433892 SERPINA3P01011 423 aa10.84□□□□□ -0.67
CD44-209ENST00000433892 OR2T7P0C7T2 308 aa10.84□□□□□ -0.67
CD44-209ENST00000433892 GIFP27352 417 aa10.84□□□□□ -0.67
CD44-209ENST00000433892 CTHP32929 405 aa10.84□□□□□ -0.67
CD44-209ENST00000433892 RPL4P36578 427 aaKnown RBP10.84□□□□□ -0.67
CD44-209ENST00000433892 PSMB10P40306 273 aa10.84□□□□□ -0.67
CD44-209ENST00000433892 TPMTP51580 245 aa10.84□□□□□ -0.67
CD44-209ENST00000433892 GBX2P52951 348 aaPredicted RBP10.84□□□□□ -0.67
CD44-209ENST00000433892 RAB38P57729 211 aa10.84□□□□□ -0.67
CD44-209ENST00000433892 RPS11P62280 158 aaKnown RBP eCLIP10.84□□□□□ -0.67
CD44-209ENST00000433892 SIRPAP78324 504 aa10.84□□□□□ -0.67
CD44-209ENST00000433892 CCDC58Q4VC31 144 aa10.84□□□□□ -0.67
CD44-209ENST00000433892 MANEAQ5SRI9 462 aa10.84□□□□□ -0.67
CD44-209ENST00000433892 ULK3Q6PHR2 472 aa10.84□□□□□ -0.67
CD44-209ENST00000433892 PRSS45Q7RTY3 260 aa10.84□□□□□ -0.67
CD44-209ENST00000433892 RCBTB1Q8NDN9 531 aa10.84□□□□□ -0.67
CD44-209ENST00000433892 OR13H1Q8NG92 308 aa10.84□□□□□ -0.67
CD44-209ENST00000433892 OR2T27Q8NH04 317 aa10.84□□□□□ -0.67
CD44-209ENST00000433892 SLC37A2Q8TED4 501 aa10.84□□□□□ -0.67
CD44-209ENST00000433892 RIT1Q92963 219 aa10.84□□□□□ -0.67
CD44-209ENST00000433892 ORAI1Q96D31 301 aa10.84□□□□□ -0.67
CD44-209ENST00000433892 SPACA7Q96KW9 195 aa10.84□□□□□ -0.67
CD44-209ENST00000433892 NMNAT3Q96T66 252 aa10.84□□□□□ -0.67
CD44-209ENST00000433892 DPAGT1Q9H3H5 408 aa10.84□□□□□ -0.67
CD44-209ENST00000433892 GHITMQ9H3K2 345 aa10.84□□□□□ -0.67
CD44-209ENST00000433892 RPS6KB2Q9UBS0 482 aa10.84□□□□□ -0.67
CD44-209ENST00000433892 GON4LQ3T8J9 2241 aa10.84□□□□□ -0.67
CD44-209ENST00000433892 TGFBR3LH3BV60 316 aa10.84□□□□□ -0.67
CD44-209ENST00000433892 TSC22D2O75157 780 aa10.84□□□□□ -0.67
CD44-209ENST00000433892 SERPINI2O75830 405 aa10.84□□□□□ -0.67
CD44-209ENST00000433892 UBL3O95164 117 aa10.84□□□□□ -0.67
CD44-209ENST00000433892 TCRBP04435 133 aa10.84□□□□□ -0.67
CD44-209ENST00000433892 ATXN8OSP0DMR3 200 aa10.84□□□□□ -0.67
CD44-209ENST00000433892 ST6GAL1P15907 406 aa10.84□□□□□ -0.67
CD44-209ENST00000433892 CCR6P51684 374 aa10.84□□□□□ -0.67
CD44-209ENST00000433892 LINC00114Q6XXX2 140 aa10.84□□□□□ -0.67
CD44-209ENST00000433892 UBE2Q1Q7Z7E8 422 aa10.84□□□□□ -0.67
CD44-209ENST00000433892 SLC35F2Q8IXU6 374 aa10.84□□□□□ -0.67
CD44-209ENST00000433892 IZUMO1Q8IYV9 350 aa10.84□□□□□ -0.67
CD44-209ENST00000433892 SLC22A18ASQ8N1D0 253 aa10.84□□□□□ -0.67
CD44-209ENST00000433892 OR11H7Q8NGC8 314 aa10.84□□□□□ -0.67
CD44-209ENST00000433892 ZPLD1Q8TCW7 415 aa10.84□□□□□ -0.67
CD44-209ENST00000433892 HOXB13Q92826 284 aaPredicted RBP10.84□□□□□ -0.67
CD44-209ENST00000433892 SCMH1Q96GD3 660 aa10.84□□□□□ -0.67
CD44-209ENST00000433892 HYLS1Q96M11 299 aa10.84□□□□□ -0.67
CD44-209ENST00000433892 VSTM2LQ96N03 204 aa10.84□□□□□ -0.67
CD44-209ENST00000433892 LMF2Q9BU23 707 aaKnown RBP10.84□□□□□ -0.67
CD44-209ENST00000433892 TRAF4Q9BUZ4 470 aaPredicted RBP10.84□□□□□ -0.67
CD44-209ENST00000433892 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP10.84□□□□□ -0.67
CD44-209ENST00000433892 IRF2BPLQ9H1B7 796 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms