RNA–Protein interactions for RNA: ENST00000427506.5

GPC1-205, Transcript of glypican 1, humanhuman

TSL 3

Gene GPC1, Length 573 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-205ENST00000427506 SLC35A1P78382 337 aa16.33■□□□□ 0.2
GPC1-205ENST00000427506 NKX6-1P78426 367 aaPredicted RBP16.33■□□□□ 0.2
GPC1-205ENST00000427506 FADDQ13158 208 aa16.33■□□□□ 0.2
GPC1-205ENST00000427506 ZSWIM7Q19AV6 140 aa16.33■□□□□ 0.2
GPC1-205ENST00000427506 AGKQ53H12 422 aa16.33■□□□□ 0.2
GPC1-205ENST00000427506 ZNF704Q6ZNC4 412 aaPredicted RBP16.33■□□□□ 0.2
GPC1-205ENST00000427506 C20orf204Q6ZNR8 217 aa16.33■□□□□ 0.2
GPC1-205ENST00000427506 P3H2Q8IVL5 708 aa16.33■□□□□ 0.2
GPC1-205ENST00000427506 FUNDC1Q8IVP5 155 aa16.33■□□□□ 0.2
GPC1-205ENST00000427506 CCDC103Q8IW40 242 aa16.33■□□□□ 0.2
GPC1-205ENST00000427506 UBE2J2Q8N2K1 259 aa16.33■□□□□ 0.2
GPC1-205ENST00000427506 CKAP2Q8WWK9 683 aa16.33■□□□□ 0.2
GPC1-205ENST00000427506 HSD17B8Q92506 261 aa16.33■□□□□ 0.2
GPC1-205ENST00000427506 THOC1Q96FV9 657 aaKnown RBP16.33■□□□□ 0.2
GPC1-205ENST00000427506 USB1Q9BQ65 265 aaKnown RBP16.33■□□□□ 0.2
GPC1-205ENST00000427506 NAA11Q9BSU3 229 aaPredicted RBP16.33■□□□□ 0.2
GPC1-205ENST00000427506 IFT52Q9Y366 437 aa16.33■□□□□ 0.2
GPC1-205ENST00000427506 IGKV3D-15A0A087WSY6 115 aa16.32■□□□□ 0.2
GPC1-205ENST00000427506 ZNF716A6NP11 495 aa16.32■□□□□ 0.2
GPC1-205ENST00000427506 EIF1BO60739 113 aaKnown RBP16.32■□□□□ 0.2
GPC1-205ENST00000427506 RIPPLY3P57055 190 aa16.32■□□□□ 0.2
GPC1-205ENST00000427506 TAB1Q15750 504 aa16.32■□□□□ 0.2
GPC1-205ENST00000427506 STK11Q15831 433 aa16.32■□□□□ 0.2
GPC1-205ENST00000427506 ZNF311Q5JNZ3 666 aa16.32■□□□□ 0.2
GPC1-205ENST00000427506 RNF220Q5VTB9 566 aa16.32■□□□□ 0.2
GPC1-205ENST00000427506 WBP2NLQ6ICG8 309 aa16.32■□□□□ 0.2
GPC1-205ENST00000427506 CLIP4Q8N3C7 705 aa16.32■□□□□ 0.2
GPC1-205ENST00000427506 WFDC11Q8NEX6 87 aa16.32■□□□□ 0.2
GPC1-205ENST00000427506 MAL2Q969L2 176 aa16.32■□□□□ 0.2
GPC1-205ENST00000427506 APH1AQ96BI3 265 aa16.32■□□□□ 0.2
GPC1-205ENST00000427506 MAGEB18Q96M61 343 aa16.32■□□□□ 0.2
GPC1-205ENST00000427506 PIP5K1AQ99755 562 aa16.32■□□□□ 0.2
GPC1-205ENST00000427506 SPATA9Q9BWV2 254 aa16.32■□□□□ 0.2
GPC1-205ENST00000427506 POTEKPQ9BYX7 375 aa16.32■□□□□ 0.2
GPC1-205ENST00000427506 ADAM19Q9H013 955 aa16.32■□□□□ 0.2
GPC1-205ENST00000427506 A4GALTQ9NPC4 353 aa16.32■□□□□ 0.2
GPC1-205ENST00000427506 ARHGEF9O43307 516 aa16.31■□□□□ 0.2
GPC1-205ENST00000427506 MRPL33O75394 65 aaKnown RBP16.31■□□□□ 0.2
GPC1-205ENST00000427506 PLAUP00749 431 aa16.31■□□□□ 0.2
GPC1-205ENST00000427506 IGHV3-9P01782 118 aa16.31■□□□□ 0.2
GPC1-205ENST00000427506 IMPDH2P12268 514 aa16.31■□□□□ 0.2
GPC1-205ENST00000427506 H2AFXP16104 143 aaPredicted RBP16.31■□□□□ 0.2
GPC1-205ENST00000427506 PPIBP23284 216 aaKnown RBP16.31■□□□□ 0.2
GPC1-205ENST00000427506 EDNRAP25101 427 aa16.31■□□□□ 0.2
GPC1-205ENST00000427506 HOXC12P31275 282 aa16.31■□□□□ 0.2
GPC1-205ENST00000427506 ACAA2P42765 397 aaKnown RBP16.31■□□□□ 0.2
GPC1-205ENST00000427506 ATP4BP51164 291 aa16.31■□□□□ 0.2
GPC1-205ENST00000427506 IRX1P78414 480 aaPredicted RBP16.31■□□□□ 0.2
GPC1-205ENST00000427506 SQLEQ14534 574 aa16.31■□□□□ 0.2
GPC1-205ENST00000427506 PAGE3Q5JUK9 113 aa16.31■□□□□ 0.2
GPC1-205ENST00000427506 LRIF1Q5T3J3 769 aa16.31■□□□□ 0.2
GPC1-205ENST00000427506 LSRQ86X29 649 aaPredicted RBP16.31■□□□□ 0.2
GPC1-205ENST00000427506 BBS10Q8TAM1 723 aa16.31■□□□□ 0.2
GPC1-205ENST00000427506 RABEP2Q9H5N1 569 aa16.31■□□□□ 0.2
GPC1-205ENST00000427506 ESRP2Q9H6T0 727 aaKnown RBP16.31■□□□□ 0.2
GPC1-205ENST00000427506 SLC25A37Q9NYZ2 338 aa16.31■□□□□ 0.2
GPC1-205ENST00000427506 SLAMF8Q9P0V8 285 aa16.31■□□□□ 0.2
GPC1-205ENST00000427506 PRDM4Q9UKN5 801 aa16.31■□□□□ 0.2
GPC1-205ENST00000427506 MED13LQ71F56 2210 aa16.3■□□□□ 0.2
GPC1-205ENST00000427506 ZC3H12DA2A288 527 aaKnown RBP16.3■□□□□ 0.2
GPC1-205ENST00000427506 CLOCKO15516 846 aa16.3■□□□□ 0.2
GPC1-205ENST00000427506 RAMP1O60894 148 aa16.3■□□□□ 0.2
GPC1-205ENST00000427506 PGM3O95394 542 aa16.3■□□□□ 0.2
GPC1-205ENST00000427506 CNOT4O95628 575 aaKnown RBP16.3■□□□□ 0.2
GPC1-205ENST00000427506 PRG2P13727 222 aa16.3■□□□□ 0.2
GPC1-205ENST00000427506 HOXB9P17482 250 aaPredicted RBP16.3■□□□□ 0.2
GPC1-205ENST00000427506 IGHV1-2P23083 117 aa16.3■□□□□ 0.2
GPC1-205ENST00000427506 IDUAP35475 653 aa16.3■□□□□ 0.2
GPC1-205ENST00000427506 GCNT6Q5T4J0 391 aa16.3■□□□□ 0.2
GPC1-205ENST00000427506 PRAMEF8Q5VWM4 474 aa16.3■□□□□ 0.2
GPC1-205ENST00000427506 PRAMEF7Q5VXH5 474 aa16.3■□□□□ 0.2
GPC1-205ENST00000427506 SHEQ5VZ18 495 aa16.3■□□□□ 0.2
GPC1-205ENST00000427506 FBXW9Q5XUX1 488 aa16.3■□□□□ 0.2
GPC1-205ENST00000427506 NFKBIDQ8NI38 313 aa16.3■□□□□ 0.2
GPC1-205ENST00000427506 MUCL1Q96DR8 90 aa16.3■□□□□ 0.2
GPC1-205ENST00000427506 BCL2L10Q9HD36 194 aa16.3■□□□□ 0.2
GPC1-205ENST00000427506 TMEM45AQ9NWC5 275 aa16.3■□□□□ 0.2
GPC1-205ENST00000427506 NIPSNAP3AQ9UFN0 247 aaPredicted RBP16.3■□□□□ 0.2
GPC1-205ENST00000427506 CCT8L1PA6NM43 557 aa16.29■□□□□ 0.2
GPC1-205ENST00000427506 EVPLLA8MZ36 301 aa16.29■□□□□ 0.2
GPC1-205ENST00000427506 GPIP06744 558 aa16.29■□□□□ 0.2
GPC1-205ENST00000427506 CD3EP07766 207 aa16.29■□□□□ 0.2
GPC1-205ENST00000427506 BMP2P12643 396 aa16.29■□□□□ 0.2
GPC1-205ENST00000427506 GGT1P19440 569 aa16.29■□□□□ 0.2
GPC1-205ENST00000427506 SLC16A1P53985 500 aa16.29■□□□□ 0.2
GPC1-205ENST00000427506 H3F3AP84243 136 aa16.29■□□□□ 0.2
GPC1-205ENST00000427506 BNIP2Q12982 314 aa16.29■□□□□ 0.2
GPC1-205ENST00000427506 CEACAM7Q14002 265 aa16.29■□□□□ 0.2
GPC1-205ENST00000427506 PPA1Q15181 289 aa16.29■□□□□ 0.2
GPC1-205ENST00000427506 OR7A5Q15622 319 aa16.29■□□□□ 0.2
GPC1-205ENST00000427506 OTUD3Q5T2D3 398 aaPredicted RBP16.29■□□□□ 0.2
GPC1-205ENST00000427506 CASP12Q6UXS9 341 aa16.29■□□□□ 0.2
GPC1-205ENST00000427506 SERPINA11Q86U17 422 aa16.29■□□□□ 0.2
GPC1-205ENST00000427506 MSRB3Q8IXL7 192 aa16.29■□□□□ 0.2
GPC1-205ENST00000427506 LRRC75A-AS1Q8N1F1 130 aa16.29■□□□□ 0.2
GPC1-205ENST00000427506 AKAP1Q92667 903 aaKnown RBP eCLIP16.29■□□□□ 0.2
GPC1-205ENST00000427506 PERPQ96FX8 193 aa16.29■□□□□ 0.2
GPC1-205ENST00000427506 TAPBPLQ9BX59 468 aa16.29■□□□□ 0.2
GPC1-205ENST00000427506 VAPAQ9P0L0 249 aa16.29■□□□□ 0.2
GPC1-205ENST00000427506 DCTN4Q9UJW0 460 aa16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms