RNA–Protein interactions for RNA: ENST00000424438.5

RPUSD3-204, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 2 BASIC

Gene RPUSD3, Length 1,005 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-204ENST00000424438 RAB1BQ9H0U4 201 aa13.56□□□□□ -0.24
RPUSD3-204ENST00000424438 TUBB1Q9H4B7 451 aa13.56□□□□□ -0.24
RPUSD3-204ENST00000424438 EXOSC3Q9NQT5 275 aaKnown RBP13.56□□□□□ -0.24
RPUSD3-204ENST00000424438 CA10Q9NS85 328 aa13.56□□□□□ -0.24
RPUSD3-204ENST00000424438 TMEM181Q9P2C4 612 aa13.56□□□□□ -0.24
RPUSD3-204ENST00000424438 PSMC3IPQ9P2W1 217 aaPredicted RBP13.56□□□□□ -0.24
RPUSD3-204ENST00000424438 CRNNQ9UBG3 495 aaPredicted RBP13.56□□□□□ -0.24
RPUSD3-204ENST00000424438 UPB1Q9UBR1 384 aa13.56□□□□□ -0.24
RPUSD3-204ENST00000424438 KCNE5Q9UJ90 142 aa13.56□□□□□ -0.24
RPUSD3-204ENST00000424438 PCDHGB4Q9UN71 923 aa13.56□□□□□ -0.24
RPUSD3-204ENST00000424438 MOKQ9UQ07 419 aa13.56□□□□□ -0.24
RPUSD3-204ENST00000424438 PCDHB14Q9Y5E9 798 aa13.56□□□□□ -0.24
RPUSD3-204ENST00000424438 A0A0G2JK05 382 aa13.55□□□□□ -0.24
RPUSD3-204ENST00000424438 PLIN3O60664 434 aa13.55□□□□□ -0.24
RPUSD3-204ENST00000424438 LILRA1O75019 489 aa13.55□□□□□ -0.24
RPUSD3-204ENST00000424438 UGT2B17O75795 530 aa13.55□□□□□ -0.24
RPUSD3-204ENST00000424438 FGF4P08620 206 aa13.55□□□□□ -0.24
RPUSD3-204ENST00000424438 LAMP1P11279 417 aa13.55□□□□□ -0.24
RPUSD3-204ENST00000424438 PGM1P36871 562 aa13.55□□□□□ -0.24
RPUSD3-204ENST00000424438 SRP14P37108 136 aaKnown RBP13.55□□□□□ -0.24
RPUSD3-204ENST00000424438 HTR3AP46098 478 aa13.55□□□□□ -0.24
RPUSD3-204ENST00000424438 CDH15P55291 814 aa13.55□□□□□ -0.24
RPUSD3-204ENST00000424438 SLC17A1Q14916 467 aa13.55□□□□□ -0.24
RPUSD3-204ENST00000424438 ARHGAP11BQ3KRB8 267 aa13.55□□□□□ -0.24
RPUSD3-204ENST00000424438 LIPMQ5VYY2 423 aa13.55□□□□□ -0.24
RPUSD3-204ENST00000424438 KANK2Q63ZY3 851 aa13.55□□□□□ -0.24
RPUSD3-204ENST00000424438 CASP12Q6UXS9 341 aa13.55□□□□□ -0.24
RPUSD3-204ENST00000424438 TRMT10CQ7L0Y3 403 aaKnown RBP13.55□□□□□ -0.24
RPUSD3-204ENST00000424438 CLHC1Q8NHS4 586 aa13.55□□□□□ -0.24
RPUSD3-204ENST00000424438 MIPOL1Q8TD10 442 aa13.55□□□□□ -0.24
RPUSD3-204ENST00000424438 MAGEE2Q8TD90 523 aaPredicted RBP13.55□□□□□ -0.24
RPUSD3-204ENST00000424438 PMM1Q92871 262 aa13.55□□□□□ -0.24
RPUSD3-204ENST00000424438 C3orf49Q96BT1 292 aa13.55□□□□□ -0.24
RPUSD3-204ENST00000424438 SLC38A2Q96QD8 506 aa13.55□□□□□ -0.24
RPUSD3-204ENST00000424438 SOX7Q9BT81 388 aa13.55□□□□□ -0.24
RPUSD3-204ENST00000424438 C1QTNF6Q9BXI9 259 aa13.55□□□□□ -0.24
RPUSD3-204ENST00000424438 ZNF442Q9H7R0 627 aa13.55□□□□□ -0.24
RPUSD3-204ENST00000424438 CTPS2Q9NRF8 586 aa13.55□□□□□ -0.24
RPUSD3-204ENST00000424438 DNAJC15Q9Y5T4 150 aa13.55□□□□□ -0.24
RPUSD3-204ENST00000424438 PTGDR2Q9Y5Y4 395 aa13.55□□□□□ -0.24
RPUSD3-204ENST00000424438 ZNF208O43345 1280 aa13.54□□□□□ -0.24
RPUSD3-204ENST00000424438 SNUPNO95149 360 aaKnown RBP13.54□□□□□ -0.24
RPUSD3-204ENST00000424438 AGR2O95994 175 aa13.54□□□□□ -0.24
RPUSD3-204ENST00000424438 CRYAAP02489 173 aa13.54□□□□□ -0.24
RPUSD3-204ENST00000424438 TFPIP10646 304 aa13.54□□□□□ -0.24
RPUSD3-204ENST00000424438 HOXB1P14653 301 aaPredicted RBP13.54□□□□□ -0.24
RPUSD3-204ENST00000424438 CREB1P16220 341 aa13.54□□□□□ -0.24
RPUSD3-204ENST00000424438 ACTG1P63261 375 aa13.54□□□□□ -0.24
RPUSD3-204ENST00000424438 SLC35A1P78382 337 aa13.54□□□□□ -0.24
RPUSD3-204ENST00000424438 ADIPOQQ15848 244 aa13.54□□□□□ -0.24
RPUSD3-204ENST00000424438 TSPO2Q5TGU0 170 aa13.54□□□□□ -0.24
RPUSD3-204ENST00000424438 PAQR6Q6TCH4 344 aa13.54□□□□□ -0.24
RPUSD3-204ENST00000424438 ADGRG3Q86Y34 549 aa13.54□□□□□ -0.24
RPUSD3-204ENST00000424438 ZNF786Q8N393 782 aa13.54□□□□□ -0.24
RPUSD3-204ENST00000424438 NUP37Q8NFH4 326 aa13.54□□□□□ -0.24
RPUSD3-204ENST00000424438 OR7A2PQ8NGA2 310 aa13.54□□□□□ -0.24
RPUSD3-204ENST00000424438 OR4F15Q8NGB8 312 aa13.54□□□□□ -0.24
RPUSD3-204ENST00000424438 PPP3R2Q96LZ3 170 aa13.54□□□□□ -0.24
RPUSD3-204ENST00000424438 PRPF18Q99633 342 aaKnown RBP13.54□□□□□ -0.24
RPUSD3-204ENST00000424438 NAA11Q9BSU3 229 aaPredicted RBP13.54□□□□□ -0.24
RPUSD3-204ENST00000424438 SF3B5Q9BWJ5 86 aaKnown RBP13.54□□□□□ -0.24
RPUSD3-204ENST00000424438 METRNQ9UJH8 293 aa13.54□□□□□ -0.24
RPUSD3-204ENST00000424438 ARPC4-TTLL3A0A0A6YYG9 625 aa13.53□□□□□ -0.24
RPUSD3-204ENST00000424438 IGHV1-18A0A0C4DH31 117 aa13.53□□□□□ -0.24
RPUSD3-204ENST00000424438 OR6C65A6NJZ3 312 aa13.53□□□□□ -0.24
RPUSD3-204ENST00000424438 FAAHO00519 579 aa13.53□□□□□ -0.24
RPUSD3-204ENST00000424438 IGLV1-44P01699 117 aa13.53□□□□□ -0.24
RPUSD3-204ENST00000424438 ERCC1P07992 297 aaPredicted RBP13.53□□□□□ -0.24
RPUSD3-204ENST00000424438 UBTFL6P0CB48 400 aaPredicted RBP13.53□□□□□ -0.24
RPUSD3-204ENST00000424438 EFNA1P20827 205 aaPredicted RBP13.53□□□□□ -0.24
RPUSD3-204ENST00000424438 CRHR1P34998 444 aa13.53□□□□□ -0.24
RPUSD3-204ENST00000424438 RNF144AP50876 292 aaPredicted RBP13.53□□□□□ -0.24
RPUSD3-204ENST00000424438 RIN1Q13671 783 aa13.53□□□□□ -0.24
RPUSD3-204ENST00000424438 SPDYE7PQ495Y7 208 aa13.53□□□□□ -0.24
RPUSD3-204ENST00000424438 USP43Q70EL4 1123 aa13.53□□□□□ -0.24
RPUSD3-204ENST00000424438 CCDC103Q8IW40 242 aa13.53□□□□□ -0.24
RPUSD3-204ENST00000424438 VRK1Q99986 396 aaPredicted RBP13.53□□□□□ -0.24
RPUSD3-204ENST00000424438 KCNS3Q9BQ31 491 aa13.53□□□□□ -0.24
RPUSD3-204ENST00000424438 GRPEL1Q9HAV7 217 aa13.53□□□□□ -0.24
RPUSD3-204ENST00000424438 EXD2Q9NVH0 621 aa13.53□□□□□ -0.24
RPUSD3-204ENST00000424438 MID2Q9UJV3 735 aa13.53□□□□□ -0.24
RPUSD3-204ENST00000424438 VSTM5A8MXK1 200 aa13.52□□□□□ -0.25
RPUSD3-204ENST00000424438 RIPK2O43353 540 aa13.52□□□□□ -0.25
RPUSD3-204ENST00000424438 FCMRO60667 390 aa13.52□□□□□ -0.25
RPUSD3-204ENST00000424438 C6orf47O95873 294 aa13.52□□□□□ -0.25
RPUSD3-204ENST00000424438 OR4A8P0C604 315 aa13.52□□□□□ -0.25
RPUSD3-204ENST00000424438 LINC00032P0C843 101 aa13.52□□□□□ -0.25
RPUSD3-204ENST00000424438 CPA3P15088 417 aa13.52□□□□□ -0.25
RPUSD3-204ENST00000424438 PRPS1L1P21108 318 aa13.52□□□□□ -0.25
RPUSD3-204ENST00000424438 APEX1P27695 318 aaKnown RBP13.52□□□□□ -0.25
RPUSD3-204ENST00000424438 CCT5P48643 541 aa13.52□□□□□ -0.25
RPUSD3-204ENST00000424438 GPR68Q15743 365 aa13.52□□□□□ -0.25
RPUSD3-204ENST00000424438 CARTPTQ16568 116 aa13.52□□□□□ -0.25
RPUSD3-204ENST00000424438 WHAMMP3Q1A5X7 153 aa13.52□□□□□ -0.25
RPUSD3-204ENST00000424438 UGT3A2Q3SY77 523 aa13.52□□□□□ -0.25
RPUSD3-204ENST00000424438 XKR7Q5GH72 579 aa13.52□□□□□ -0.25
RPUSD3-204ENST00000424438 EMBQ6PCB8 327 aa13.52□□□□□ -0.25
RPUSD3-204ENST00000424438 SYT10Q6XYQ8 523 aa13.52□□□□□ -0.25
RPUSD3-204ENST00000424438 RIMKLAQ8IXN7 391 aa13.52□□□□□ -0.25
RPUSD3-204ENST00000424438 ANKS4BQ8N8V4 417 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms