RNA–Protein interactions for RNA: ENST00000423635.5

CHCHD3-202, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

TSL 1 (best)

Gene CHCHD3, Length 1,310 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-202ENST00000423635 LGALS3BPQ08380 585 aa14.53□□□□□ -0.08
CHCHD3-202ENST00000423635 SLC17A1Q14916 467 aa14.53□□□□□ -0.08
CHCHD3-202ENST00000423635 GPR68Q15743 365 aa14.53□□□□□ -0.08
CHCHD3-202ENST00000423635 C3orf36Q3SXR2 165 aa14.53□□□□□ -0.08
CHCHD3-202ENST00000423635 C8orf74Q6P047 294 aa14.53□□□□□ -0.08
CHCHD3-202ENST00000423635 ANKRD16Q6P6B7 361 aa14.53□□□□□ -0.08
CHCHD3-202ENST00000423635 EIF3MQ7L2H7 374 aaKnown RBP14.53□□□□□ -0.08
CHCHD3-202ENST00000423635 GRINAQ7Z429 371 aa14.53□□□□□ -0.08
CHCHD3-202ENST00000423635 NATD1Q8N6N6 113 aa14.53□□□□□ -0.08
CHCHD3-202ENST00000423635 FAM71CQ8NEG0 241 aa14.53□□□□□ -0.08
CHCHD3-202ENST00000423635 OR7A2PQ8NGA2 310 aa14.53□□□□□ -0.08
CHCHD3-202ENST00000423635 SFXN5Q8TD22 340 aa14.53□□□□□ -0.08
CHCHD3-202ENST00000423635 GCDHQ92947 438 aaPredicted RBP14.53□□□□□ -0.08
CHCHD3-202ENST00000423635 TMEM45BQ96B21 275 aa14.53□□□□□ -0.08
CHCHD3-202ENST00000423635 MOAP1Q96BY2 351 aa14.53□□□□□ -0.08
CHCHD3-202ENST00000423635 SNX18Q96RF0 628 aa14.53□□□□□ -0.08
CHCHD3-202ENST00000423635 DOK1Q99704 481 aa14.53□□□□□ -0.08
CHCHD3-202ENST00000423635 TUBB1Q9H4B7 451 aa14.53□□□□□ -0.08
CHCHD3-202ENST00000423635 TMEM181Q9P2C4 612 aa14.53□□□□□ -0.08
CHCHD3-202ENST00000423635 CRNNQ9UBG3 495 aaPredicted RBP14.53□□□□□ -0.08
CHCHD3-202ENST00000423635 PKD1L1Q8TDX9 2849 aa14.53□□□□□ -0.08
CHCHD3-202ENST00000423635 CENPVL1A0A0U1RR11 272 aa14.52□□□□□ -0.08
CHCHD3-202ENST00000423635 B4DSR2 109 aa14.52□□□□□ -0.08
CHCHD3-202ENST00000423635 SCAMP2O15127 329 aaKnown RBP14.52□□□□□ -0.08
CHCHD3-202ENST00000423635 STX11O75558 287 aa14.52□□□□□ -0.08
CHCHD3-202ENST00000423635 AK1P00568 194 aa14.52□□□□□ -0.08
CHCHD3-202ENST00000423635 RPL3P39023 403 aaKnown RBP14.52□□□□□ -0.08
CHCHD3-202ENST00000423635 OR2B6P58173 313 aa14.52□□□□□ -0.08
CHCHD3-202ENST00000423635 SCGB2A2Q13296 93 aa14.52□□□□□ -0.08
CHCHD3-202ENST00000423635 LSM12Q3MHD2 195 aaKnown RBP14.52□□□□□ -0.08
CHCHD3-202ENST00000423635 HIKESHIQ53FT3 197 aa14.52□□□□□ -0.08
CHCHD3-202ENST00000423635 CFAP157Q5JU67 520 aa14.52□□□□□ -0.08
CHCHD3-202ENST00000423635 RINLQ6ZS11 566 aa14.52□□□□□ -0.08
CHCHD3-202ENST00000423635 POMGNT2Q8NAT1 580 aa14.52□□□□□ -0.08
CHCHD3-202ENST00000423635 OR5D16Q8NGK9 328 aa14.52□□□□□ -0.08
CHCHD3-202ENST00000423635 OIT3Q8WWZ8 545 aa14.52□□□□□ -0.08
CHCHD3-202ENST00000423635 FMO2Q99518 471 aa14.52□□□□□ -0.08
CHCHD3-202ENST00000423635 KCNS3Q9BQ31 491 aa14.52□□□□□ -0.08
CHCHD3-202ENST00000423635 OR11A1Q9GZK7 315 aa14.52□□□□□ -0.08
CHCHD3-202ENST00000423635 TRRAPQ9Y4A5 3859 aa14.51□□□□□ -0.09
CHCHD3-202ENST00000423635 DUXAA6NLW8 204 aa14.51□□□□□ -0.09
CHCHD3-202ENST00000423635 AZIN1O14977 448 aa14.51□□□□□ -0.09
CHCHD3-202ENST00000423635 ERCC1P07992 297 aaPredicted RBP14.51□□□□□ -0.09
CHCHD3-202ENST00000423635 SLC35A1P78382 337 aa14.51□□□□□ -0.09
CHCHD3-202ENST00000423635 NAAAQ02083 359 aa14.51□□□□□ -0.09
CHCHD3-202ENST00000423635 TRIP10Q15642 601 aa14.51□□□□□ -0.09
CHCHD3-202ENST00000423635 ARHGAP11BQ3KRB8 267 aa14.51□□□□□ -0.09
CHCHD3-202ENST00000423635 SPDYE7PQ495Y7 208 aa14.51□□□□□ -0.09
CHCHD3-202ENST00000423635 USP43Q70EL4 1123 aa14.51□□□□□ -0.09
CHCHD3-202ENST00000423635 ZIC4Q8N9L1 334 aa14.51□□□□□ -0.09
CHCHD3-202ENST00000423635 NUP37Q8NFH4 326 aa14.51□□□□□ -0.09
CHCHD3-202ENST00000423635 OR4F15Q8NGB8 312 aa14.51□□□□□ -0.09
CHCHD3-202ENST00000423635 ZNF563Q8TA94 476 aa14.51□□□□□ -0.09
CHCHD3-202ENST00000423635 UBASH3BQ8TF42 649 aa14.51□□□□□ -0.09
CHCHD3-202ENST00000423635 ZNF418Q8TF45 676 aaPredicted RBP14.51□□□□□ -0.09
CHCHD3-202ENST00000423635 WDR60Q8WVS4 1066 aa14.51□□□□□ -0.09
CHCHD3-202ENST00000423635 COQ8BQ96D53 544 aa14.51□□□□□ -0.09
CHCHD3-202ENST00000423635 DNAJA3Q96EY1 480 aa14.51□□□□□ -0.09
CHCHD3-202ENST00000423635 NAA11Q9BSU3 229 aaPredicted RBP14.51□□□□□ -0.09
CHCHD3-202ENST00000423635 ZNF442Q9H7R0 627 aa14.51□□□□□ -0.09
CHCHD3-202ENST00000423635 TMEM45AQ9NWC5 275 aa14.51□□□□□ -0.09
CHCHD3-202ENST00000423635 MKLN1Q9UL63 735 aa14.51□□□□□ -0.09
CHCHD3-202ENST00000423635 SPEF1Q9Y4P9 236 aa14.51□□□□□ -0.09
CHCHD3-202ENST00000423635 TGP01266 2768 aa14.5□□□□□ -0.09
CHCHD3-202ENST00000423635 TMEM129A0AVI4 362 aa14.5□□□□□ -0.09
CHCHD3-202ENST00000423635 C6orf47O95873 294 aa14.5□□□□□ -0.09
CHCHD3-202ENST00000423635 GUSBP08236 651 aa14.5□□□□□ -0.09
CHCHD3-202ENST00000423635 IGFBP1P08833 259 aaPredicted RBP14.5□□□□□ -0.09
CHCHD3-202ENST00000423635 LINC00032P0C843 101 aa14.5□□□□□ -0.09
CHCHD3-202ENST00000423635 IMPDH2P12268 514 aa14.5□□□□□ -0.09
CHCHD3-202ENST00000423635 IFNGR1P15260 489 aa14.5□□□□□ -0.09
CHCHD3-202ENST00000423635 ECHS1P30084 290 aa14.5□□□□□ -0.09
CHCHD3-202ENST00000423635 CASQ1P31415 396 aa14.5□□□□□ -0.09
CHCHD3-202ENST00000423635 HPCAL1P37235 193 aa14.5□□□□□ -0.09
CHCHD3-202ENST00000423635 SLC1A3P43003 542 aa14.5□□□□□ -0.09
CHCHD3-202ENST00000423635 HILS1P60008 231 aa14.5□□□□□ -0.09
CHCHD3-202ENST00000423635 MAPK14Q16539 360 aa14.5□□□□□ -0.09
CHCHD3-202ENST00000423635 TBRG1Q3YBR2 411 aa14.5□□□□□ -0.09
CHCHD3-202ENST00000423635 PRR31Q5SQ13 230 aa14.5□□□□□ -0.09
CHCHD3-202ENST00000423635 LIPMQ5VYY2 423 aa14.5□□□□□ -0.09
CHCHD3-202ENST00000423635 VHLLQ6RSH7 139 aa14.5□□□□□ -0.09
CHCHD3-202ENST00000423635 ABHD12BQ7Z5M8 362 aaPredicted RBP14.5□□□□□ -0.09
CHCHD3-202ENST00000423635 GLCCI1Q86VQ1 547 aa14.5□□□□□ -0.09
CHCHD3-202ENST00000423635 HOMEZQ8IX15 550 aa14.5□□□□□ -0.09
CHCHD3-202ENST00000423635 ZCCHC24Q8N2G6 241 aaKnown RBP14.5□□□□□ -0.09
CHCHD3-202ENST00000423635 FAM169BQ8N8A8 192 aa14.5□□□□□ -0.09
CHCHD3-202ENST00000423635 PMM1Q92871 262 aa14.5□□□□□ -0.09
CHCHD3-202ENST00000423635 ZNF350Q9GZX5 532 aa14.5□□□□□ -0.09
CHCHD3-202ENST00000423635 PIF1Q9H611 641 aa14.5□□□□□ -0.09
CHCHD3-202ENST00000423635 OXSMQ9NWU1 459 aa14.5□□□□□ -0.09
CHCHD3-202ENST00000423635 PCDHB10Q9UN67 800 aa14.5□□□□□ -0.09
CHCHD3-202ENST00000423635 PCDHGB4Q9UN71 923 aa14.5□□□□□ -0.09
CHCHD3-202ENST00000423635 SLC35A3Q9Y2D2 325 aa14.5□□□□□ -0.09
CHCHD3-202ENST00000423635 DNAJC15Q9Y5T4 150 aa14.5□□□□□ -0.09
CHCHD3-202ENST00000423635 ARPC4-TTLL3A0A0A6YYG9 625 aa14.49□□□□□ -0.09
CHCHD3-202ENST00000423635 VSTM5A8MXK1 200 aa14.49□□□□□ -0.09
CHCHD3-202ENST00000423635 TMEM114B3SHH9 223 aa14.49□□□□□ -0.09
CHCHD3-202ENST00000423635 TRIM77I1YAP6 450 aa14.49□□□□□ -0.09
CHCHD3-202ENST00000423635 hCG_2039718K7EN88 272 aa14.49□□□□□ -0.09
CHCHD3-202ENST00000423635 ZNF208O43345 1280 aa14.49□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms