RNA–Protein interactions for RNA: ENST00000423214.1

COL18A1-205, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 5

Gene COL18A1, Length 839 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-205ENST00000423214 TMEM120BA0PK00 339 aa14.22□□□□□ -0.13
COL18A1-205ENST00000423214 GOLGA8OA6NCC3 632 aa14.22□□□□□ -0.13
COL18A1-205ENST00000423214 ZNF716A6NP11 495 aa14.22□□□□□ -0.13
COL18A1-205ENST00000423214 GOLGA8NF8WBI6 632 aa14.22□□□□□ -0.13
COL18A1-205ENST00000423214 M0R1B8 84 aa14.22□□□□□ -0.13
COL18A1-205ENST00000423214 BCAS1O75363 584 aaPredicted RBP14.22□□□□□ -0.13
COL18A1-205ENST00000423214 ERLIN1O75477 346 aa14.22□□□□□ -0.13
COL18A1-205ENST00000423214 GUSBP08236 651 aa14.22□□□□□ -0.13
COL18A1-205ENST00000423214 CCNA2P20248 432 aa14.22□□□□□ -0.13
COL18A1-205ENST00000423214 PTAFRP25105 342 aa14.22□□□□□ -0.13
COL18A1-205ENST00000423214 HTR3AP46098 478 aa14.22□□□□□ -0.13
COL18A1-205ENST00000423214 CLNS1AP54105 237 aaKnown RBP14.22□□□□□ -0.13
COL18A1-205ENST00000423214 WDR4P57081 412 aaKnown RBP14.22□□□□□ -0.13
COL18A1-205ENST00000423214 FUT5Q11128 374 aa14.22□□□□□ -0.13
COL18A1-205ENST00000423214 BEND6Q5SZJ8 279 aaPredicted RBP14.22□□□□□ -0.13
COL18A1-205ENST00000423214 OR7E24Q6IFN5 339 aa14.22□□□□□ -0.13
COL18A1-205ENST00000423214 HMBOX1Q6NT76 420 aa14.22□□□□□ -0.13
COL18A1-205ENST00000423214 PODNL1Q6PEZ8 512 aa14.22□□□□□ -0.13
COL18A1-205ENST00000423214 DNM1P46Q6ZS02 220 aa14.22□□□□□ -0.13
COL18A1-205ENST00000423214 HMGN2P46Q86SG4 172 aa14.22□□□□□ -0.13
COL18A1-205ENST00000423214 KIRREL3Q8IZU9 778 aa14.22□□□□□ -0.13
COL18A1-205ENST00000423214 MUC15Q8N387 334 aa14.22□□□□□ -0.13
COL18A1-205ENST00000423214 TESCQ96BS2 214 aa14.22□□□□□ -0.13
COL18A1-205ENST00000423214 DDIT4LQ96D03 193 aa14.22□□□□□ -0.13
COL18A1-205ENST00000423214 NEURL3Q96EH8 262 aa14.22□□□□□ -0.13
COL18A1-205ENST00000423214 DHRS9Q9BPW9 319 aa14.22□□□□□ -0.13
COL18A1-205ENST00000423214 SLC35A5Q9BS91 424 aa14.22□□□□□ -0.13
COL18A1-205ENST00000423214 NUF2Q9BZD4 464 aa14.22□□□□□ -0.13
COL18A1-205ENST00000423214 OR11A1Q9GZK7 315 aa14.22□□□□□ -0.13
COL18A1-205ENST00000423214 SLC25A15Q9Y619 301 aa14.22□□□□□ -0.13
COL18A1-205ENST00000423214 IGHV4-30-2A0A087WSY4 118 aa14.21□□□□□ -0.13
COL18A1-205ENST00000423214 E9PBE3 544 aa14.21□□□□□ -0.13
COL18A1-205ENST00000423214 CD40P25942 277 aa14.21□□□□□ -0.13
COL18A1-205ENST00000423214 TTKP33981 857 aa14.21□□□□□ -0.13
COL18A1-205ENST00000423214 IDH2P48735 452 aaKnown RBP14.21□□□□□ -0.13
COL18A1-205ENST00000423214 CLK1P49759 484 aaKnown RBP14.21□□□□□ -0.13
COL18A1-205ENST00000423214 ANXA11P50995 505 aaKnown RBP14.21□□□□□ -0.13
COL18A1-205ENST00000423214 SLC16A1P53985 500 aa14.21□□□□□ -0.13
COL18A1-205ENST00000423214 MAGOHP61326 146 aaKnown RBP14.21□□□□□ -0.13
COL18A1-205ENST00000423214 IRX1P78414 480 aaPredicted RBP14.21□□□□□ -0.13
COL18A1-205ENST00000423214 KCNJ10P78508 379 aa14.21□□□□□ -0.13
COL18A1-205ENST00000423214 SPANXN4Q5MJ08 99 aa14.21□□□□□ -0.13
COL18A1-205ENST00000423214 C11orf71Q6IPW1 123 aa14.21□□□□□ -0.13
COL18A1-205ENST00000423214 TRIML2Q8N7C3 387 aa14.21□□□□□ -0.13
COL18A1-205ENST00000423214 SAP130Q9H0E3 1048 aa14.21□□□□□ -0.13
COL18A1-205ENST00000423214 TMEM181Q9P2C4 612 aa14.21□□□□□ -0.13
COL18A1-205ENST00000423214 UPB1Q9UBR1 384 aa14.21□□□□□ -0.13
COL18A1-205ENST00000423214 SLC9A8Q9Y2E8 581 aa14.21□□□□□ -0.13
COL18A1-205ENST00000423214 FBN1P35555 2871 aaKnown RBP14.21□□□□□ -0.13
COL18A1-205ENST00000423214 STAB1Q9NY15 2570 aa14.21□□□□□ -0.14
COL18A1-205ENST00000423214 TMED7-TICAM2A0A0A6YYA0 188 aa14.2□□□□□ -0.14
COL18A1-205ENST00000423214 CLDN24A6NM45 220 aa14.2□□□□□ -0.14
COL18A1-205ENST00000423214 RNF212BA8MTL3 300 aa14.2□□□□□ -0.14
COL18A1-205ENST00000423214 A8MV72 311 aaPredicted RBP14.2□□□□□ -0.14
COL18A1-205ENST00000423214 E7EQL1 145 aa14.2□□□□□ -0.14
COL18A1-205ENST00000423214 SNUPNO95149 360 aaKnown RBP14.2□□□□□ -0.14
COL18A1-205ENST00000423214 UQCRBP14927 111 aa14.2□□□□□ -0.14
COL18A1-205ENST00000423214 LBPP18428 481 aa14.2□□□□□ -0.14
COL18A1-205ENST00000423214 S100A3P33764 101 aa14.2□□□□□ -0.14
COL18A1-205ENST00000423214 FABP6P51161 128 aa14.2□□□□□ -0.14
COL18A1-205ENST00000423214 POLR2HP52434 150 aaKnown RBP14.2□□□□□ -0.14
COL18A1-205ENST00000423214 DSCR9P59020 149 aa14.2□□□□□ -0.14
COL18A1-205ENST00000423214 GNA13Q14344 377 aa14.2□□□□□ -0.14
COL18A1-205ENST00000423214 RAB35Q15286 201 aa14.2□□□□□ -0.14
COL18A1-205ENST00000423214 FAM174BQ3ZCQ3 159 aa14.2□□□□□ -0.14
COL18A1-205ENST00000423214 CHRFAM7AQ494W8 412 aa14.2□□□□□ -0.14
COL18A1-205ENST00000423214 C9orf135Q5VTT2 229 aa14.2□□□□□ -0.14
COL18A1-205ENST00000423214 KLHL24Q6TFL4 600 aa14.2□□□□□ -0.14
COL18A1-205ENST00000423214 HIPK1Q86Z02 1210 aa14.2□□□□□ -0.14
COL18A1-205ENST00000423214 CCDC103Q8IW40 242 aa14.2□□□□□ -0.14
COL18A1-205ENST00000423214 CMIPQ8IY22 773 aa14.2□□□□□ -0.14
COL18A1-205ENST00000423214 OR52E4Q8NGH9 312 aa14.2□□□□□ -0.14
COL18A1-205ENST00000423214 WDR60Q8WVS4 1066 aa14.2□□□□□ -0.14
COL18A1-205ENST00000423214 NAA11Q9BSU3 229 aaPredicted RBP14.2□□□□□ -0.14
COL18A1-205ENST00000423214 FKRPQ9H9S5 495 aa14.2□□□□□ -0.14
COL18A1-205ENST00000423214 TMBIM4Q9HC24 238 aa14.2□□□□□ -0.14
COL18A1-205ENST00000423214 AMDHD2Q9Y303 409 aa14.2□□□□□ -0.14
COL18A1-205ENST00000423214 TMED7Q9Y3B3 224 aa14.2□□□□□ -0.14
COL18A1-205ENST00000423214 CUBNO60494 3623 aa14.2□□□□□ -0.14
COL18A1-205ENST00000423214 MALRD1Q5VYJ5 2156 aa14.2□□□□□ -0.14
COL18A1-205ENST00000423214 FAM234BA2RU67 622 aa14.19□□□□□ -0.14
COL18A1-205ENST00000423214 AP3D1O14617 1153 aa14.19□□□□□ -0.14
COL18A1-205ENST00000423214 EIF1BO60739 113 aaKnown RBP14.19□□□□□ -0.14
COL18A1-205ENST00000423214 SCN2BO60939 215 aa14.19□□□□□ -0.14
COL18A1-205ENST00000423214 ITGA5P08648 1049 aa14.19□□□□□ -0.14
COL18A1-205ENST00000423214 BMP4P12644 408 aa14.19□□□□□ -0.14
COL18A1-205ENST00000423214 SLC35A1P78382 337 aa14.19□□□□□ -0.14
COL18A1-205ENST00000423214 TGFBR3Q03167 851 aa14.19□□□□□ -0.14
COL18A1-205ENST00000423214 CASP8Q14790 479 aa14.19□□□□□ -0.14
COL18A1-205ENST00000423214 GABRA6Q16445 453 aa14.19□□□□□ -0.14
COL18A1-205ENST00000423214 C6orf52Q5T4I8 152 aa14.19□□□□□ -0.14
COL18A1-205ENST00000423214 ZNF544Q6NX49 715 aa14.19□□□□□ -0.14
COL18A1-205ENST00000423214 B3GLCTQ6Y288 498 aa14.19□□□□□ -0.14
COL18A1-205ENST00000423214 RNF130Q86XS8 419 aa14.19□□□□□ -0.14
COL18A1-205ENST00000423214 ADGRG3Q86Y34 549 aa14.19□□□□□ -0.14
COL18A1-205ENST00000423214 C17orf78Q8N4C9 275 aa14.19□□□□□ -0.14
COL18A1-205ENST00000423214 CNOT9Q92600 299 aaKnown RBP14.19□□□□□ -0.14
COL18A1-205ENST00000423214 PMM1Q92871 262 aa14.19□□□□□ -0.14
COL18A1-205ENST00000423214 PARPBPQ9NWS1 579 aa14.19□□□□□ -0.14
COL18A1-205ENST00000423214 HAO1Q9UJM8 370 aa14.19□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms