RNA–Protein interactions for RNA: ENST00000420813.5

MSH6-203, Transcript of mutS homolog 6, humanhuman

TSL 4

Gene MSH6, Length 491 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-203ENST00000420813 YLPM1P49750 1951 aaKnown RBP15.29■□□□□ 0.04
MSH6-203ENST00000420813 TMED7-TICAM2A0A0A6YYA0 188 aa15.29■□□□□ 0.04
MSH6-203ENST00000420813 CCDC154A6NI56 674 aa15.29■□□□□ 0.04
MSH6-203ENST00000420813 KIAA1324LA8MWY0 1029 aaPredicted RBP15.29■□□□□ 0.04
MSH6-203ENST00000420813 SDHDO14521 159 aa15.29■□□□□ 0.04
MSH6-203ENST00000420813 EIF1BO60739 113 aaKnown RBP15.29■□□□□ 0.04
MSH6-203ENST00000420813 IGHV3-9P01782 118 aa15.29■□□□□ 0.04
MSH6-203ENST00000420813 PGRP06401 933 aa15.29■□□□□ 0.04
MSH6-203ENST00000420813 CHRM4P08173 479 aa15.29■□□□□ 0.04
MSH6-203ENST00000420813 RPS4Y1P22090 263 aaKnown RBP15.29■□□□□ 0.04
MSH6-203ENST00000420813 PTAFRP25105 342 aa15.29■□□□□ 0.04
MSH6-203ENST00000420813 NTF4P34130 210 aa15.29■□□□□ 0.04
MSH6-203ENST00000420813 ACVR1BP36896 505 aa15.29■□□□□ 0.04
MSH6-203ENST00000420813 POLR2HP52434 150 aaKnown RBP15.29■□□□□ 0.04
MSH6-203ENST00000420813 UFM1P61960 85 aa15.29■□□□□ 0.04
MSH6-203ENST00000420813 SLC35A1P78382 337 aa15.29■□□□□ 0.04
MSH6-203ENST00000420813 DMTNQ08495 405 aa15.29■□□□□ 0.04
MSH6-203ENST00000420813 BST1Q10588 318 aa15.29■□□□□ 0.04
MSH6-203ENST00000420813 GNA13Q14344 377 aa15.29■□□□□ 0.04
MSH6-203ENST00000420813 SYPL1Q16563 259 aa15.29■□□□□ 0.04
MSH6-203ENST00000420813 NRF1Q16656 503 aa15.29■□□□□ 0.04
MSH6-203ENST00000420813 AGAP6Q5VW22 663 aa15.29■□□□□ 0.04
MSH6-203ENST00000420813 OR7E24Q6IFN5 339 aa15.29■□□□□ 0.04
MSH6-203ENST00000420813 KLHL17Q6TDP4 642 aa15.29■□□□□ 0.04
MSH6-203ENST00000420813 SPATA19Q7Z5L4 167 aa15.29■□□□□ 0.04
MSH6-203ENST00000420813 HMGN2P46Q86SG4 172 aa15.29■□□□□ 0.04
MSH6-203ENST00000420813 CROCCP2Q86T23 111 aa15.29■□□□□ 0.04
MSH6-203ENST00000420813 ANKFN1Q8N957 763 aa15.29■□□□□ 0.04
MSH6-203ENST00000420813 WDR60Q8WVS4 1066 aa15.29■□□□□ 0.04
MSH6-203ENST00000420813 DDIT4LQ96D03 193 aa15.29■□□□□ 0.04
MSH6-203ENST00000420813 HS6ST2Q96MM7 605 aa15.29■□□□□ 0.04
MSH6-203ENST00000420813 MUS81Q96NY9 551 aa15.29■□□□□ 0.04
MSH6-203ENST00000420813 MTHFD2LQ9H903 347 aaPredicted RBP15.29■□□□□ 0.04
MSH6-203ENST00000420813 KCNK9Q9NPC2 374 aa15.29■□□□□ 0.04
MSH6-203ENST00000420813 OSGIN1Q9UJX0 560 aa15.29■□□□□ 0.04
MSH6-203ENST00000420813 PRDM4Q9UKN5 801 aa15.29■□□□□ 0.04
MSH6-203ENST00000420813 TMED7Q9Y3B3 224 aa15.29■□□□□ 0.04
MSH6-203ENST00000420813 SLC25A15Q9Y619 301 aa15.29■□□□□ 0.04
MSH6-203ENST00000420813 ATRQ13535 2644 aa15.29■□□□□ 0.04
MSH6-203ENST00000420813 CCT8L1PA6NM43 557 aa15.28■□□□□ 0.04
MSH6-203ENST00000420813 AP3D1O14617 1153 aa15.28■□□□□ 0.04
MSH6-203ENST00000420813 CRLF1O75462 422 aa15.28■□□□□ 0.04
MSH6-203ENST00000420813 C1QCP02747 245 aa15.28■□□□□ 0.04
MSH6-203ENST00000420813 DBIP07108 87 aaKnown RBP15.28■□□□□ 0.04
MSH6-203ENST00000420813 UQCRBP14927 111 aa15.28■□□□□ 0.04
MSH6-203ENST00000420813 SLC1A3P43003 542 aa15.28■□□□□ 0.04
MSH6-203ENST00000420813 OR2B6P58173 313 aa15.28■□□□□ 0.04
MSH6-203ENST00000420813 CEP85LQ5SZL2 805 aa15.28■□□□□ 0.04
MSH6-203ENST00000420813 C1QTNF12Q5T7M4 302 aa15.28■□□□□ 0.04
MSH6-203ENST00000420813 CCDC103Q8IW40 242 aa15.28■□□□□ 0.04
MSH6-203ENST00000420813 GLB1L3Q8NCI6 653 aaPredicted RBP15.28■□□□□ 0.04
MSH6-203ENST00000420813 OR52N5Q8NH56 324 aa15.28■□□□□ 0.04
MSH6-203ENST00000420813 OR52E6Q96RD3 313 aa15.28■□□□□ 0.04
MSH6-203ENST00000420813 NAA11Q9BSU3 229 aaPredicted RBP15.28■□□□□ 0.04
MSH6-203ENST00000420813 PARD6BQ9BYG5 372 aa15.28■□□□□ 0.04
MSH6-203ENST00000420813 AMBRA1Q9C0C7 1298 aa15.28■□□□□ 0.04
MSH6-203ENST00000420813 CENPHQ9H3R5 247 aa15.28■□□□□ 0.04
MSH6-203ENST00000420813 PARPBPQ9NWS1 579 aa15.28■□□□□ 0.04
MSH6-203ENST00000420813 NOL12Q9UGY1 213 aaKnown RBP eCLIP15.28■□□□□ 0.04
MSH6-203ENST00000420813 SLC9A8Q9Y2E8 581 aa15.28■□□□□ 0.04
MSH6-203ENST00000420813 GPR45Q9Y5Y3 372 aa15.28■□□□□ 0.04
MSH6-203ENST00000420813 V9GYY5 206 aaPredicted RBP15.28■□□□□ 0.04
MSH6-203ENST00000420813 COL6A5A8TX70 2615 aa15.27■□□□□ 0.04
MSH6-203ENST00000420813 PDLIM1O00151 329 aa15.27■□□□□ 0.04
MSH6-203ENST00000420813 ITGA5P08648 1049 aa15.27■□□□□ 0.04
MSH6-203ENST00000420813 IL7RP16871 459 aa15.27■□□□□ 0.04
MSH6-203ENST00000420813 CCNA2P20248 432 aa15.27■□□□□ 0.04
MSH6-203ENST00000420813 CD40P25942 277 aa15.27■□□□□ 0.04
MSH6-203ENST00000420813 TACR3P29371 465 aa15.27■□□□□ 0.04
MSH6-203ENST00000420813 IL12AP29459 219 aa15.27■□□□□ 0.04
MSH6-203ENST00000420813 CDKN2CP42773 168 aa15.27■□□□□ 0.04
MSH6-203ENST00000420813 NME5P56597 212 aa15.27■□□□□ 0.04
MSH6-203ENST00000420813 GABRA6Q16445 453 aa15.27■□□□□ 0.04
MSH6-203ENST00000420813 PAQR6Q6TCH4 344 aa15.27■□□□□ 0.04
MSH6-203ENST00000420813 ZNF621Q6ZSS3 439 aa15.27■□□□□ 0.04
MSH6-203ENST00000420813 ZNF440Q8IYI8 595 aa15.27■□□□□ 0.04
MSH6-203ENST00000420813 C17orf78Q8N4C9 275 aa15.27■□□□□ 0.04
MSH6-203ENST00000420813 MAPK1IP1LQ8NDC0 245 aa15.27■□□□□ 0.04
MSH6-203ENST00000420813 C1orf162Q8NEQ5 155 aaPredicted RBP15.27■□□□□ 0.04
MSH6-203ENST00000420813 DNAJA3Q96EY1 480 aa15.27■□□□□ 0.04
MSH6-203ENST00000420813 ZBTB18Q99592 522 aa15.27■□□□□ 0.04
MSH6-203ENST00000420813 DHRS9Q9BPW9 319 aa15.27■□□□□ 0.04
MSH6-203ENST00000420813 INPP5KQ9BT40 448 aa15.27■□□□□ 0.04
MSH6-203ENST00000420813 DCTN4Q9UJW0 460 aa15.27■□□□□ 0.04
MSH6-203ENST00000420813 GDF2Q9UK05 429 aaPredicted RBP15.27■□□□□ 0.04
MSH6-203ENST00000420813 ADAM21Q9UKJ8 722 aa15.27■□□□□ 0.04
MSH6-203ENST00000420813 B3GALT5Q9Y2C3 310 aa15.27■□□□□ 0.04
MSH6-203ENST00000420813 FLVCR1Q9Y5Y0 555 aa15.27■□□□□ 0.04
MSH6-203ENST00000420813 ARFGEF3Q5TH69 2177 aa15.26■□□□□ 0.03
MSH6-203ENST00000420813 TMEM72A0PK05 275 aa15.26■□□□□ 0.03
MSH6-203ENST00000420813 CFAP73A6NFT4 308 aa15.26■□□□□ 0.03
MSH6-203ENST00000420813 TRPC5OSA6NMA1 111 aa15.26■□□□□ 0.03
MSH6-203ENST00000420813 HDAC3O15379 428 aa15.26■□□□□ 0.03
MSH6-203ENST00000420813 TLX2O43763 284 aaPredicted RBP15.26■□□□□ 0.03
MSH6-203ENST00000420813 NDUFS7O75251 213 aa15.26■□□□□ 0.03
MSH6-203ENST00000420813 KRT75O95678 551 aa15.26■□□□□ 0.03
MSH6-203ENST00000420813 TP53P04637 393 aaPredicted RBP15.26■□□□□ 0.03
MSH6-203ENST00000420813 NR2F1P10589 423 aa15.26■□□□□ 0.03
MSH6-203ENST00000420813 IMPDH2P12268 514 aa15.26■□□□□ 0.03
MSH6-203ENST00000420813 TTKP33981 857 aa15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms