RNA–Protein interactions for RNA: ENST00000420058.1

NFE4-201, Transcript of nuclear factor, erythroid 4, humanhuman

TSL 1 (best)

Gene NFE4, Length 1,072 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFE4-201ENST00000420058 PCLAFQ15004 111 aa12.39□□□□□ -0.43
NFE4-201ENST00000420058 LSM12Q3MHD2 195 aaKnown RBP12.39□□□□□ -0.43
NFE4-201ENST00000420058 SPDYE7PQ495Y7 208 aa12.39□□□□□ -0.43
NFE4-201ENST00000420058 HIKESHIQ53FT3 197 aa12.39□□□□□ -0.43
NFE4-201ENST00000420058 C6orf136Q5SQH8 315 aa12.39□□□□□ -0.43
NFE4-201ENST00000420058 EMBQ6PCB8 327 aa12.39□□□□□ -0.43
NFE4-201ENST00000420058 EIF3MQ7L2H7 374 aaKnown RBP12.39□□□□□ -0.43
NFE4-201ENST00000420058 RFLNBQ8N5W9 214 aa12.39□□□□□ -0.43
NFE4-201ENST00000420058 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP12.39□□□□□ -0.43
NFE4-201ENST00000420058 TWIST2Q8WVJ9 160 aa12.39□□□□□ -0.43
NFE4-201ENST00000420058 MOAP1Q96BY2 351 aa12.39□□□□□ -0.43
NFE4-201ENST00000420058 TRMOQ9BU70 441 aa12.39□□□□□ -0.43
NFE4-201ENST00000420058 SAP130Q9H0E3 1048 aa12.39□□□□□ -0.43
NFE4-201ENST00000420058 TMEM181Q9P2C4 612 aa12.39□□□□□ -0.43
NFE4-201ENST00000420058 CLDN24A6NM45 220 aa12.38□□□□□ -0.43
NFE4-201ENST00000420058 TMEM114B3SHH9 223 aa12.38□□□□□ -0.43
NFE4-201ENST00000420058 KIAA0513O60268 411 aa12.38□□□□□ -0.43
NFE4-201ENST00000420058 STAMBPO95630 424 aa12.38□□□□□ -0.43
NFE4-201ENST00000420058 GUSBP08236 651 aa12.38□□□□□ -0.43
NFE4-201ENST00000420058 HNF1AP20823 631 aa12.38□□□□□ -0.43
NFE4-201ENST00000420058 GIFP27352 417 aa12.38□□□□□ -0.43
NFE4-201ENST00000420058 MPGP29372 298 aa12.38□□□□□ -0.43
NFE4-201ENST00000420058 ARRB2P32121 409 aa12.38□□□□□ -0.43
NFE4-201ENST00000420058 RYKP34925 604 aa12.38□□□□□ -0.43
NFE4-201ENST00000420058 RPL3P39023 403 aaKnown RBP12.38□□□□□ -0.43
NFE4-201ENST00000420058 MAGEA8P43361 318 aa12.38□□□□□ -0.43
NFE4-201ENST00000420058 CCT5P48643 541 aa12.38□□□□□ -0.43
NFE4-201ENST00000420058 OR2B6P58173 313 aa12.38□□□□□ -0.43
NFE4-201ENST00000420058 PRPS1P60891 318 aa12.38□□□□□ -0.43
NFE4-201ENST00000420058 FUT5Q11128 374 aa12.38□□□□□ -0.43
NFE4-201ENST00000420058 ADIPOQQ15848 244 aa12.38□□□□□ -0.43
NFE4-201ENST00000420058 IQCCQ4KMZ1 466 aa12.38□□□□□ -0.43
NFE4-201ENST00000420058 C1QTNF12Q5T7M4 302 aa12.38□□□□□ -0.43
NFE4-201ENST00000420058 IL23RQ5VWK5 629 aa12.38□□□□□ -0.43
NFE4-201ENST00000420058 TYW3Q6IPR3 259 aaKnown RBP12.38□□□□□ -0.43
NFE4-201ENST00000420058 CASP12Q6UXS9 341 aa12.38□□□□□ -0.43
NFE4-201ENST00000420058 GRINAQ7Z429 371 aa12.38□□□□□ -0.43
NFE4-201ENST00000420058 DDIASQ8IXT1 998 aa12.38□□□□□ -0.43
NFE4-201ENST00000420058 NATD1Q8N6N6 113 aa12.38□□□□□ -0.43
NFE4-201ENST00000420058 MIPOL1Q8TD10 442 aa12.38□□□□□ -0.43
NFE4-201ENST00000420058 ZHX1-C8orf76Q96EF9 292 aa12.38□□□□□ -0.43
NFE4-201ENST00000420058 VRK1Q99986 396 aaPredicted RBP12.38□□□□□ -0.43
NFE4-201ENST00000420058 C1orf50Q9BV19 199 aa12.38□□□□□ -0.43
NFE4-201ENST00000420058 PLK3Q9H4B4 646 aa12.38□□□□□ -0.43
NFE4-201ENST00000420058 CA10Q9NS85 328 aa12.38□□□□□ -0.43
NFE4-201ENST00000420058 PARPBPQ9NWS1 579 aa12.38□□□□□ -0.43
NFE4-201ENST00000420058 FKBP7Q9Y680 259 aa12.38□□□□□ -0.43
NFE4-201ENST00000420058 TMEM72A0PK05 275 aa12.37□□□□□ -0.43
NFE4-201ENST00000420058 ZC3H12DA2A288 527 aaKnown RBP12.37□□□□□ -0.43
NFE4-201ENST00000420058 DUXAA6NLW8 204 aa12.37□□□□□ -0.43
NFE4-201ENST00000420058 ANKRD28O15084 1053 aa12.37□□□□□ -0.43
NFE4-201ENST00000420058 TCF21O43680 179 aa12.37□□□□□ -0.43
NFE4-201ENST00000420058 TRIM13O60858 407 aa12.37□□□□□ -0.43
NFE4-201ENST00000420058 SCN2BO60939 215 aa12.37□□□□□ -0.43
NFE4-201ENST00000420058 LYPLA1O75608 230 aaPredicted RBP12.37□□□□□ -0.43
NFE4-201ENST00000420058 C1QCP02747 245 aa12.37□□□□□ -0.43
NFE4-201ENST00000420058 SHBGP04278 402 aa12.37□□□□□ -0.43
NFE4-201ENST00000420058 TACSTD2P09758 323 aa12.37□□□□□ -0.43
NFE4-201ENST00000420058 DDX5P17844 614 aaKnown RBP12.37□□□□□ -0.43
NFE4-201ENST00000420058 CCNA2P20248 432 aa12.37□□□□□ -0.43
NFE4-201ENST00000420058 FKBP2P26885 142 aaKnown RBP12.37□□□□□ -0.43
NFE4-201ENST00000420058 CARTPTQ16568 116 aa12.37□□□□□ -0.43
NFE4-201ENST00000420058 HMGN2P46Q86SG4 172 aa12.37□□□□□ -0.43
NFE4-201ENST00000420058 CLECL1Q8IZS7 167 aa12.37□□□□□ -0.43
NFE4-201ENST00000420058 ZCCHC24Q8N2G6 241 aaKnown RBP12.37□□□□□ -0.43
NFE4-201ENST00000420058 CNOT9Q92600 299 aaKnown RBP12.37□□□□□ -0.43
NFE4-201ENST00000420058 TMEM45BQ96B21 275 aa12.37□□□□□ -0.43
NFE4-201ENST00000420058 PPP3R2Q96LZ3 170 aa12.37□□□□□ -0.43
NFE4-201ENST00000420058 ZNF385AQ96PM9 386 aaKnown RBP12.37□□□□□ -0.43
NFE4-201ENST00000420058 DUSP26Q9BV47 211 aa12.37□□□□□ -0.43
NFE4-201ENST00000420058 ADAM19Q9H013 955 aa12.37□□□□□ -0.43
NFE4-201ENST00000420058 MYOZ1Q9NP98 299 aaPredicted RBP12.37□□□□□ -0.43
NFE4-201ENST00000420058 ATAD3AQ9NVI7 634 aa12.37□□□□□ -0.43
NFE4-201ENST00000420058 UPB1Q9UBR1 384 aa12.37□□□□□ -0.43
NFE4-201ENST00000420058 OSGIN1Q9UJX0 560 aa12.37□□□□□ -0.43
NFE4-201ENST00000420058 TMED7-TICAM2A0A0A6YYA0 188 aa12.36□□□□□ -0.43
NFE4-201ENST00000420058 TMEM129A0AVI4 362 aa12.36□□□□□ -0.43
NFE4-201ENST00000420058 B9A039 149 aa12.36□□□□□ -0.43
NFE4-201ENST00000420058 AP3D1O14617 1153 aa12.36□□□□□ -0.43
NFE4-201ENST00000420058 CFLARO15519 480 aa12.36□□□□□ -0.43
NFE4-201ENST00000420058 VENTXO95231 258 aa12.36□□□□□ -0.43
NFE4-201ENST00000420058 CHEK2O96017 543 aa12.36□□□□□ -0.43
NFE4-201ENST00000420058 AK1P00568 194 aa12.36□□□□□ -0.43
NFE4-201ENST00000420058 OR4A8P0C604 315 aa12.36□□□□□ -0.43
NFE4-201ENST00000420058 OR12D1P0DN82 309 aa12.36□□□□□ -0.43
NFE4-201ENST00000420058 PRPS1L1P21108 318 aa12.36□□□□□ -0.43
NFE4-201ENST00000420058 CALCRP30988 508 aa12.36□□□□□ -0.43
NFE4-201ENST00000420058 IDH2P48735 452 aaKnown RBP12.36□□□□□ -0.43
NFE4-201ENST00000420058 SNRPD2P62316 118 aaKnown RBP12.36□□□□□ -0.43
NFE4-201ENST00000420058 TGFBR3Q03167 851 aa12.36□□□□□ -0.43
NFE4-201ENST00000420058 HGFACQ04756 655 aa12.36□□□□□ -0.43
NFE4-201ENST00000420058 LGALS3BPQ08380 585 aa12.36□□□□□ -0.43
NFE4-201ENST00000420058 EFNB3Q15768 340 aa12.36□□□□□ -0.43
NFE4-201ENST00000420058 ANKRD16Q6P6B7 361 aa12.36□□□□□ -0.43
NFE4-201ENST00000420058 FRRS1Q6ZNA5 592 aa12.36□□□□□ -0.43
NFE4-201ENST00000420058 LINGO2Q7L985 606 aa12.36□□□□□ -0.43
NFE4-201ENST00000420058 CCDC63Q8NA47 563 aa12.36□□□□□ -0.43
NFE4-201ENST00000420058 ZNF540Q8NDQ6 660 aa12.36□□□□□ -0.43
NFE4-201ENST00000420058 ZNF563Q8TA94 476 aa12.36□□□□□ -0.43
NFE4-201ENST00000420058 BCL2L2Q92843 193 aaPredicted RBP12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms