RNA–Protein interactions for RNA: ENST00000413232.5

CPSF7-204, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 3

Gene CPSF7, Length 727 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-204ENST00000413232 B3GALT5Q9Y2C3 310 aa16.91■□□□□ 0.3
CPSF7-204ENST00000413232 HDGFL3Q9Y3E1 203 aa16.91■□□□□ 0.3
CPSF7-204ENST00000413232 SLC25A15Q9Y619 301 aa16.91■□□□□ 0.3
CPSF7-204ENST00000413232 TMED7-TICAM2A0A0A6YYA0 188 aa16.9■□□□□ 0.3
CPSF7-204ENST00000413232 TMEM72A0PK05 275 aa16.9■□□□□ 0.3
CPSF7-204ENST00000413232 ZC3H12DA2A288 527 aaKnown RBP16.9■□□□□ 0.3
CPSF7-204ENST00000413232 AGAP5A6NIR3 686 aa16.9■□□□□ 0.3
CPSF7-204ENST00000413232 CRLF1O75462 422 aa16.9■□□□□ 0.3
CPSF7-204ENST00000413232 GSNP06396 782 aa16.9■□□□□ 0.3
CPSF7-204ENST00000413232 ITGA5P08648 1049 aa16.9■□□□□ 0.3
CPSF7-204ENST00000413232 ZNF83P51522 516 aa16.9■□□□□ 0.3
CPSF7-204ENST00000413232 CLNS1AP54105 237 aaKnown RBP16.9■□□□□ 0.3
CPSF7-204ENST00000413232 OR2B6P58173 313 aa16.9■□□□□ 0.3
CPSF7-204ENST00000413232 ETFDHQ16134 617 aa16.9■□□□□ 0.3
CPSF7-204ENST00000413232 B3GLCTQ6Y288 498 aa16.9■□□□□ 0.3
CPSF7-204ENST00000413232 P2RY8Q86VZ1 359 aa16.9■□□□□ 0.3
CPSF7-204ENST00000413232 PNPT1Q8TCS8 783 aaKnown RBP16.9■□□□□ 0.3
CPSF7-204ENST00000413232 C1QTNF6Q9BXI9 259 aa16.9■□□□□ 0.3
CPSF7-204ENST00000413232 SLC6A13Q9NSD5 602 aa16.9■□□□□ 0.3
CPSF7-204ENST00000413232 AIG1Q9NVV5 245 aa16.9■□□□□ 0.3
CPSF7-204ENST00000413232 TMEM181Q9P2C4 612 aa16.9■□□□□ 0.3
CPSF7-204ENST00000413232 TMED7Q9Y3B3 224 aa16.9■□□□□ 0.3
CPSF7-204ENST00000413232 CIB4A0PJX0 185 aa16.89■□□□□ 0.29
CPSF7-204ENST00000413232 PDLIM1O00151 329 aa16.89■□□□□ 0.29
CPSF7-204ENST00000413232 RPS4Y1P22090 263 aaKnown RBP16.89■□□□□ 0.29
CPSF7-204ENST00000413232 IRX1P78414 480 aaPredicted RBP16.89■□□□□ 0.29
CPSF7-204ENST00000413232 GABRA6Q16445 453 aa16.89■□□□□ 0.29
CPSF7-204ENST00000413232 DPY19L1Q2PZI1 675 aa16.89■□□□□ 0.29
CPSF7-204ENST00000413232 C11orf71Q6IPW1 123 aa16.89■□□□□ 0.29
CPSF7-204ENST00000413232 LRRC34Q8IZ02 419 aa16.89■□□□□ 0.29
CPSF7-204ENST00000413232 PIAS4Q8N2W9 510 aaPredicted RBP16.89■□□□□ 0.29
CPSF7-204ENST00000413232 WDR31Q8NA23 367 aa16.89■□□□□ 0.29
CPSF7-204ENST00000413232 PIGXQ8TBF5 258 aa16.89■□□□□ 0.29
CPSF7-204ENST00000413232 MUS81Q96NY9 551 aa16.89■□□□□ 0.29
CPSF7-204ENST00000413232 TRNT1Q96Q11 434 aaKnown RBP16.89■□□□□ 0.29
CPSF7-204ENST00000413232 PANX1Q96RD7 426 aa16.89■□□□□ 0.29
CPSF7-204ENST00000413232 GRIP2Q9C0E4 1043 aa16.89■□□□□ 0.29
CPSF7-204ENST00000413232 CENPHQ9H3R5 247 aa16.89■□□□□ 0.29
CPSF7-204ENST00000413232 WDR55Q9H6Y2 383 aaPredicted RBP16.89■□□□□ 0.29
CPSF7-204ENST00000413232 KCNK9Q9NPC2 374 aa16.89■□□□□ 0.29
CPSF7-204ENST00000413232 ASB6Q9NWX5 421 aa16.89■□□□□ 0.29
CPSF7-204ENST00000413232 MALT1Q9UDY8 824 aa16.89■□□□□ 0.29
CPSF7-204ENST00000413232 TRAPPC4Q9Y296 219 aa16.89■□□□□ 0.29
CPSF7-204ENST00000413232 GPR45Q9Y5Y3 372 aa16.89■□□□□ 0.29
CPSF7-204ENST00000413232 SPIN1Q9Y657 262 aaPredicted RBP16.89■□□□□ 0.29
CPSF7-204ENST00000413232 CCT8L1PA6NM43 557 aa16.88■□□□□ 0.29
CPSF7-204ENST00000413232 MRPL33O75394 65 aaKnown RBP16.88■□□□□ 0.29
CPSF7-204ENST00000413232 PGRP06401 933 aa16.88■□□□□ 0.29
CPSF7-204ENST00000413232 CD40P25942 277 aa16.88■□□□□ 0.29
CPSF7-204ENST00000413232 TACR3P29371 465 aa16.88■□□□□ 0.29
CPSF7-204ENST00000413232 CLK1P49759 484 aaKnown RBP16.88■□□□□ 0.29
CPSF7-204ENST00000413232 WDR4P57081 412 aaKnown RBP16.88■□□□□ 0.29
CPSF7-204ENST00000413232 CEP85LQ5SZL2 805 aa16.88■□□□□ 0.29
CPSF7-204ENST00000413232 C9orf135Q5VTT2 229 aa16.88■□□□□ 0.29
CPSF7-204ENST00000413232 LRRC74BQ6ZQY2 392 aa16.88■□□□□ 0.29
CPSF7-204ENST00000413232 ZNF621Q6ZSS3 439 aa16.88■□□□□ 0.29
CPSF7-204ENST00000413232 HTRA1Q92743 480 aa16.88■□□□□ 0.29
CPSF7-204ENST00000413232 ZHX1-C8orf76Q96EF9 292 aa16.88■□□□□ 0.29
CPSF7-204ENST00000413232 OR52E6Q96RD3 313 aa16.88■□□□□ 0.29
CPSF7-204ENST00000413232 ALG2Q9H553 416 aa16.88■□□□□ 0.29
CPSF7-204ENST00000413232 SLC7A10Q9NS82 523 aa16.88■□□□□ 0.29
CPSF7-204ENST00000413232 RLIMQ9NVW2 624 aa16.88■□□□□ 0.29
CPSF7-204ENST00000413232 TAS2R16Q9NYV7 291 aa16.88■□□□□ 0.29
CPSF7-204ENST00000413232 FLVCR1Q9Y5Y0 555 aa16.88■□□□□ 0.29
CPSF7-204ENST00000413232 MALRD1Q5VYJ5 2156 aa16.87■□□□□ 0.29
CPSF7-204ENST00000413232 GPR171O14626 319 aa16.87■□□□□ 0.29
CPSF7-204ENST00000413232 DNPH1O43598 174 aa16.87■□□□□ 0.29
CPSF7-204ENST00000413232 SSX4O60224 188 aa16.87■□□□□ 0.29
CPSF7-204ENST00000413232 SNUPNO95149 360 aaKnown RBP16.87■□□□□ 0.29
CPSF7-204ENST00000413232 EPHA3P29320 983 aa16.87■□□□□ 0.29
CPSF7-204ENST00000413232 TTKP33981 857 aa16.87■□□□□ 0.29
CPSF7-204ENST00000413232 POLR2HP52434 150 aaKnown RBP16.87■□□□□ 0.29
CPSF7-204ENST00000413232 MVDP53602 400 aa16.87■□□□□ 0.29
CPSF7-204ENST00000413232 HPCAP84074 193 aa16.87■□□□□ 0.29
CPSF7-204ENST00000413232 SLC25A3Q00325 362 aa16.87■□□□□ 0.29
CPSF7-204ENST00000413232 DMTNQ08495 405 aa16.87■□□□□ 0.29
CPSF7-204ENST00000413232 MRPL2Q5T653 305 aaKnown RBP16.87■□□□□ 0.29
CPSF7-204ENST00000413232 PAIP2Q9BPZ3 127 aaKnown RBP16.87■□□□□ 0.29
CPSF7-204ENST00000413232 CACNG6Q9BXT2 260 aa16.87■□□□□ 0.29
CPSF7-204ENST00000413232 ADAM19Q9H013 955 aa16.87■□□□□ 0.29
CPSF7-204ENST00000413232 MTHFD2LQ9H903 347 aaPredicted RBP16.87■□□□□ 0.29
CPSF7-204ENST00000413232 MXRA5Q9NR99 2828 aa16.86■□□□□ 0.29
CPSF7-204ENST00000413232 IGHV4-30-2A0A087WSY4 118 aa16.86■□□□□ 0.29
CPSF7-204ENST00000413232 A0A096LNT2 108 aa16.86■□□□□ 0.29
CPSF7-204ENST00000413232 ZNF208O43345 1280 aa16.86■□□□□ 0.29
CPSF7-204ENST00000413232 GPRIN2O60269 458 aa16.86■□□□□ 0.29
CPSF7-204ENST00000413232 GKN3PP0CG01 181 aa16.86■□□□□ 0.29
CPSF7-204ENST00000413232 FKBP2P26885 142 aaKnown RBP16.86■□□□□ 0.29
CPSF7-204ENST00000413232 SLC1A3P43003 542 aa16.86■□□□□ 0.29
CPSF7-204ENST00000413232 MAGEA8P43361 318 aa16.86■□□□□ 0.29
CPSF7-204ENST00000413232 EPS8Q12929 822 aa16.86■□□□□ 0.29
CPSF7-204ENST00000413232 SLC17A1Q14916 467 aa16.86■□□□□ 0.29
CPSF7-204ENST00000413232 TSPO2Q5TGU0 170 aa16.86■□□□□ 0.29
CPSF7-204ENST00000413232 SLC22A25Q6T423 547 aa16.86■□□□□ 0.29
CPSF7-204ENST00000413232 TMEM108Q6UXF1 575 aa16.86■□□□□ 0.29
CPSF7-204ENST00000413232 CASP12Q6UXS9 341 aa16.86■□□□□ 0.29
CPSF7-204ENST00000413232 CMIPQ8IY22 773 aa16.86■□□□□ 0.29
CPSF7-204ENST00000413232 ANKRD42Q8N9B4 389 aa16.86■□□□□ 0.29
CPSF7-204ENST00000413232 ZIC4Q8N9L1 334 aa16.86■□□□□ 0.29
CPSF7-204ENST00000413232 WDR60Q8WVS4 1066 aa16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms