RNA–Protein interactions for RNA: ENST00000412393.5

LINC00342-201, long intergenic non-protein coding RNA 342, humanhuman

TSL 3 BASIC

Gene LINC00342, Length 654 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00342-201ENST00000412393 DDX39BQ13838 428 aaKnown RBP4.84□□□□□ -1.63
LINC00342-201ENST00000412393 KIAA0040Q15053 153 aa4.84□□□□□ -1.63
LINC00342-201ENST00000412393 PCBP2Q15366 365 aaKnown RBP eCLIP4.84□□□□□ -1.63
LINC00342-201ENST00000412393 NPTX1Q15818 432 aa4.84□□□□□ -1.63
LINC00342-201ENST00000412393 MAPKAPK3Q16644 382 aa4.84□□□□□ -1.63
LINC00342-201ENST00000412393 PFKFB4Q16877 469 aa4.84□□□□□ -1.63
LINC00342-201ENST00000412393 CTU2Q2VPK5 515 aaKnown RBP4.84□□□□□ -1.63
LINC00342-201ENST00000412393 TMEM35AQ53FP2 167 aa4.84□□□□□ -1.63
LINC00342-201ENST00000412393 KRTCAP3Q53RY4 240 aa4.84□□□□□ -1.63
LINC00342-201ENST00000412393 YIF1BQ5BJH7 314 aa4.84□□□□□ -1.63
LINC00342-201ENST00000412393 NDUFAF5Q5TEU4 345 aa4.84□□□□□ -1.63
LINC00342-201ENST00000412393 KHDRBS2Q5VWX1 349 aaKnown RBP4.84□□□□□ -1.63
LINC00342-201ENST00000412393 TIGD3Q6B0B8 471 aa4.84□□□□□ -1.63
LINC00342-201ENST00000412393 KDM4DQ6B0I6 523 aa4.84□□□□□ -1.63
LINC00342-201ENST00000412393 GRHL2Q6ISB3 625 aa4.84□□□□□ -1.63
LINC00342-201ENST00000412393 SHQ1Q6PI26 577 aaKnown RBP4.84□□□□□ -1.63
LINC00342-201ENST00000412393 XKRXQ6PP77 449 aa4.84□□□□□ -1.63
LINC00342-201ENST00000412393 ZNF793Q6ZN11 406 aa4.84□□□□□ -1.63
LINC00342-201ENST00000412393 GDPGP1Q6ZNW5 385 aa4.84□□□□□ -1.63
LINC00342-201ENST00000412393 IDO2Q6ZQW0 420 aa4.84□□□□□ -1.63
LINC00342-201ENST00000412393 GDPD3Q7L5L3 318 aa4.84□□□□□ -1.63
LINC00342-201ENST00000412393 PIWIL3Q7Z3Z3 882 aaKnown RBP4.84□□□□□ -1.63
LINC00342-201ENST00000412393 CCDC190Q86UF4 302 aa4.84□□□□□ -1.63
LINC00342-201ENST00000412393 CALHM3Q86XJ0 350 aa4.84□□□□□ -1.63
LINC00342-201ENST00000412393 OFCC1Q8IZS5 231 aa4.84□□□□□ -1.63
LINC00342-201ENST00000412393 BCL6BQ8N143 479 aaPredicted RBP4.84□□□□□ -1.63
LINC00342-201ENST00000412393 TMEM132CQ8N3T6 1108 aa4.84□□□□□ -1.63
LINC00342-201ENST00000412393 TMEM156Q8N614 296 aa4.84□□□□□ -1.63
LINC00342-201ENST00000412393 C1orf52Q8N6N3 182 aaKnown RBP4.84□□□□□ -1.63
LINC00342-201ENST00000412393 ACOT4Q8N9L9 421 aa4.84□□□□□ -1.63
LINC00342-201ENST00000412393 ASCC1Q8N9N2 400 aaKnown RBP4.84□□□□□ -1.63
LINC00342-201ENST00000412393 GLB1L3Q8NCI6 653 aaPredicted RBP4.84□□□□□ -1.63
LINC00342-201ENST00000412393 APCDD1LQ8NCL9 501 aa4.84□□□□□ -1.63
LINC00342-201ENST00000412393 BEND2Q8NDZ0 799 aa4.84□□□□□ -1.63
LINC00342-201ENST00000412393 TOR1AIP2Q8NFQ8 470 aa4.84□□□□□ -1.63
LINC00342-201ENST00000412393 SUN5Q8TC36 379 aa4.84□□□□□ -1.63
LINC00342-201ENST00000412393 RPL3LQ92901 407 aaKnown RBP4.84□□□□□ -1.63
LINC00342-201ENST00000412393 NCLNQ969V3 563 aa4.84□□□□□ -1.63
LINC00342-201ENST00000412393 RGMAQ96B86 450 aa4.84□□□□□ -1.63
LINC00342-201ENST00000412393 SDCCAG3Q96C92 435 aa4.84□□□□□ -1.63
LINC00342-201ENST00000412393 CMTM7Q96FZ5 175 aa4.84□□□□□ -1.63
LINC00342-201ENST00000412393 EGLN2Q96KS0 407 aa4.84□□□□□ -1.63
LINC00342-201ENST00000412393 PITX2Q99697 317 aa4.84□□□□□ -1.63
LINC00342-201ENST00000412393 DHRS9Q9BPW9 319 aa4.84□□□□□ -1.63
LINC00342-201ENST00000412393 MAPKAP1Q9BPZ7 522 aa4.84□□□□□ -1.63
LINC00342-201ENST00000412393 ALOXE3Q9BYJ1 711 aa4.84□□□□□ -1.63
LINC00342-201ENST00000412393 TUBB1Q9H4B7 451 aa4.84□□□□□ -1.63
LINC00342-201ENST00000412393 ACTR8Q9H981 624 aa4.84□□□□□ -1.63
LINC00342-201ENST00000412393 C3orf14Q9HBI5 128 aa4.84□□□□□ -1.63
LINC00342-201ENST00000412393 LYRM4Q9HD34 91 aa4.84□□□□□ -1.63
LINC00342-201ENST00000412393 ACOT13Q9NPJ3 140 aa4.84□□□□□ -1.63
LINC00342-201ENST00000412393 SACM1LQ9NTJ5 587 aa4.84□□□□□ -1.63
LINC00342-201ENST00000412393 DCAF13Q9NV06 445 aaKnown RBP4.84□□□□□ -1.63
LINC00342-201ENST00000412393 SCN3BQ9NY72 215 aa4.84□□□□□ -1.63
LINC00342-201ENST00000412393 KCMF1Q9P0J7 381 aa4.84□□□□□ -1.63
LINC00342-201ENST00000412393 ZNF223Q9UK11 482 aaPredicted RBP4.84□□□□□ -1.63
LINC00342-201ENST00000412393 PPIEQ9UNP9 301 aaKnown RBP4.84□□□□□ -1.63
LINC00342-201ENST00000412393 CLDN16Q9Y5I7 305 aa4.84□□□□□ -1.63
LINC00342-201ENST00000412393 CLCA3PQ9Y6N3 262 aa4.84□□□□□ -1.63
LINC00342-201ENST00000412393 SPACA6W5XKT8 324 aa4.84□□□□□ -1.63
LINC00342-201ENST00000412393 UTP20O75691 2785 aaKnown RBP4.84□□□□□ -1.63
LINC00342-201ENST00000412393 NCKAP5O14513 1909 aa4.84□□□□□ -1.64
LINC00342-201ENST00000412393 PKDREJQ9NTG1 2253 aa4.83□□□□□ -1.64
LINC00342-201ENST00000412393 TRBV5-3A0A0A0MS03 114 aa4.83□□□□□ -1.64
LINC00342-201ENST00000412393 TRAV20A0A0B4J274 112 aa4.83□□□□□ -1.64
LINC00342-201ENST00000412393 LOC105371267A0A1B0GV96 52 aa4.83□□□□□ -1.64
LINC00342-201ENST00000412393 UBE2QL1A1L167 161 aa4.83□□□□□ -1.64
LINC00342-201ENST00000412393 LRRC14BA6NHZ5 514 aa4.83□□□□□ -1.64
LINC00342-201ENST00000412393 CENPXA8MT69 81 aa4.83□□□□□ -1.64
LINC00342-201ENST00000412393 NPIPA5E9PKD4 350 aa4.83□□□□□ -1.64
LINC00342-201ENST00000412393 SAP18O00422 153 aaKnown RBP4.83□□□□□ -1.64
LINC00342-201ENST00000412393 BET1O15155 118 aa4.83□□□□□ -1.64
LINC00342-201ENST00000412393 LDB3O75112 727 aa4.83□□□□□ -1.64
LINC00342-201ENST00000412393 ITGA10O75578 1167 aa4.83□□□□□ -1.64
LINC00342-201ENST00000412393 WISP2O76076 250 aa4.83□□□□□ -1.64
LINC00342-201ENST00000412393 SEMA3DO95025 777 aa4.83□□□□□ -1.64
LINC00342-201ENST00000412393 SIX3O95343 332 aaPredicted RBP4.83□□□□□ -1.64
LINC00342-201ENST00000412393 CLIC3O95833 236 aa4.83□□□□□ -1.64
LINC00342-201ENST00000412393 LGI1O95970 557 aa4.83□□□□□ -1.64
LINC00342-201ENST00000412393 APOA1P02647 267 aa4.83□□□□□ -1.64
LINC00342-201ENST00000412393 KRT8P05787 483 aa4.83□□□□□ -1.64
LINC00342-201ENST00000412393 RPS17P08708 135 aaKnown RBP4.83□□□□□ -1.64
LINC00342-201ENST00000412393 GAAP10253 952 aa4.83□□□□□ -1.64
LINC00342-201ENST00000412393 UBL4AP11441 157 aa4.83□□□□□ -1.64
LINC00342-201ENST00000412393 GYPEP15421 78 aa4.83□□□□□ -1.64
LINC00342-201ENST00000412393 HIST1H1TP22492 207 aaPredicted RBP4.83□□□□□ -1.64
LINC00342-201ENST00000412393 NR4A1P22736 598 aa4.83□□□□□ -1.64
LINC00342-201ENST00000412393 CPN2P22792 545 aa4.83□□□□□ -1.64
LINC00342-201ENST00000412393 HLA-DMAP28067 261 aa4.83□□□□□ -1.64
LINC00342-201ENST00000412393 TGFBR2P37173 567 aa4.83□□□□□ -1.64
LINC00342-201ENST00000412393 ARL1P40616 181 aaPredicted RBP4.83□□□□□ -1.64
LINC00342-201ENST00000412393 PIK3CBP42338 1070 aa4.83□□□□□ -1.64
LINC00342-201ENST00000412393 CA7P43166 264 aa4.83□□□□□ -1.64
LINC00342-201ENST00000412393 PIK3CGP48736 1102 aa4.83□□□□□ -1.64
LINC00342-201ENST00000412393 SSR4P51571 173 aa4.83□□□□□ -1.64
LINC00342-201ENST00000412393 GPR143P51810 404 aa4.83□□□□□ -1.64
LINC00342-201ENST00000412393 POLR2JP52435 117 aaKnown RBP4.83□□□□□ -1.64
LINC00342-201ENST00000412393 CASP6P55212 293 aa4.83□□□□□ -1.64
LINC00342-201ENST00000412393 ADAM8P78325 824 aa4.83□□□□□ -1.64
LINC00342-201ENST00000412393 ID2Q02363 134 aa4.83□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms