RNA–Protein interactions for RNA: ENST00000411769.1

CRKL-202, Transcript of CRK like proto-oncogene, adaptor protein, humanhuman

TSL 1 (best)

Gene CRKL, Length 2,037 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRKL-202ENST00000411769 CLDN22Q8N7P3 220 aa17.56■□□□□ 0.4
CRKL-202ENST00000411769 LCORQ96JN0 433 aaPredicted RBP17.56■□□□□ 0.4
CRKL-202ENST00000411769 WDR77Q9BQA1 342 aaPredicted RBP17.56■□□□□ 0.4
CRKL-202ENST00000411769 ABCB9Q9NP78 766 aa17.56■□□□□ 0.4
CRKL-202ENST00000411769 KLHL28Q9NXS3 571 aa17.56■□□□□ 0.4
CRKL-202ENST00000411769 NPAP1Q9NZP6 1156 aa17.56■□□□□ 0.4
CRKL-202ENST00000411769 GPR52Q9Y2T5 361 aa17.56■□□□□ 0.4
CRKL-202ENST00000411769 KDM4EB2RXH2 506 aaPredicted RBP17.55■□□□□ 0.4
CRKL-202ENST00000411769 LRRTM2O43300 516 aa17.55■□□□□ 0.4
CRKL-202ENST00000411769 OMPP47874 163 aa17.55■□□□□ 0.4
CRKL-202ENST00000411769 NKX2-5P52952 324 aaPredicted RBP17.55■□□□□ 0.4
CRKL-202ENST00000411769 OR2B6P58173 313 aa17.55■□□□□ 0.4
CRKL-202ENST00000411769 TAS2R41P59536 307 aa17.55■□□□□ 0.4
CRKL-202ENST00000411769 RPS25P62851 125 aaKnown RBP17.55■□□□□ 0.4
CRKL-202ENST00000411769 PLAURQ03405 335 aa17.55■□□□□ 0.4
CRKL-202ENST00000411769 RUNX1T1Q06455 604 aa17.55■□□□□ 0.4
CRKL-202ENST00000411769 TRAM2Q15035 370 aa17.55■□□□□ 0.4
CRKL-202ENST00000411769 PAPD4Q6PIY7 484 aaKnown RBP17.55■□□□□ 0.4
CRKL-202ENST00000411769 RASSF6Q6ZTQ3 369 aa17.55■□□□□ 0.4
CRKL-202ENST00000411769 HEATR5AQ86XA9 2040 aa17.55■□□□□ 0.4
CRKL-202ENST00000411769 ZNF485Q8NCK3 441 aa17.55■□□□□ 0.4
CRKL-202ENST00000411769 MED18Q9BUE0 208 aa17.55■□□□□ 0.4
CRKL-202ENST00000411769 WWTR1Q9GZV5 400 aa17.55■□□□□ 0.4
CRKL-202ENST00000411769 WDR54Q9H977 334 aa17.55■□□□□ 0.4
CRKL-202ENST00000411769 ZNF223Q9UK11 482 aaPredicted RBP17.55■□□□□ 0.4
CRKL-202ENST00000411769 ASPMQ8IZT6 3477 aa17.55■□□□□ 0.4
CRKL-202ENST00000411769 TTC36A6NLP5 189 aa17.55■□□□□ 0.4
CRKL-202ENST00000411769 CPSF4LA6NMK7 179 aaKnown RBP17.55■□□□□ 0.4
CRKL-202ENST00000411769 C9J4A7 227 aa17.55■□□□□ 0.4
CRKL-202ENST00000411769 GKN3PP0CG01 181 aa17.55■□□□□ 0.4
CRKL-202ENST00000411769 GSTT2P0CG29 244 aa17.55■□□□□ 0.4
CRKL-202ENST00000411769 GSTT2BP0CG30 244 aa17.55■□□□□ 0.4
CRKL-202ENST00000411769 LIMS3P0CW19 117 aa17.55■□□□□ 0.4
CRKL-202ENST00000411769 LIMS4P0CW20 117 aa17.55■□□□□ 0.4
CRKL-202ENST00000411769 IL7P13232 177 aa17.55■□□□□ 0.4
CRKL-202ENST00000411769 NR4A2P43354 598 aa17.55■□□□□ 0.4
CRKL-202ENST00000411769 HTR3AP46098 478 aa17.55■□□□□ 0.4
CRKL-202ENST00000411769 NXNL2Q5VZ03 156 aa17.55■□□□□ 0.4
CRKL-202ENST00000411769 TMEM53Q6P2H8 277 aa17.55■□□□□ 0.4
CRKL-202ENST00000411769 APCDD1LQ8NCL9 501 aa17.55■□□□□ 0.4
CRKL-202ENST00000411769 NFAM1Q8NET5 270 aaPredicted RBP17.55■□□□□ 0.4
CRKL-202ENST00000411769 ANKK1Q8NFD2 765 aa17.55■□□□□ 0.4
CRKL-202ENST00000411769 TEX47Q8TBZ9 253 aa17.55■□□□□ 0.4
CRKL-202ENST00000411769 GATAD2BQ8WXI9 593 aa17.55■□□□□ 0.4
CRKL-202ENST00000411769 DEPDC7Q96QD5 511 aa17.55■□□□□ 0.4
CRKL-202ENST00000411769 TAAR9Q96RI9 348 aa17.55■□□□□ 0.4
CRKL-202ENST00000411769 G6PC3Q9BUM1 346 aa17.55■□□□□ 0.4
CRKL-202ENST00000411769 PTRH2Q9Y3E5 179 aaKnown RBP17.55■□□□□ 0.4
CRKL-202ENST00000411769 IRGMA1A4Y4 181 aa17.54■□□□□ 0.4
CRKL-202ENST00000411769 CDHR4A6H8M9 788 aa17.54■□□□□ 0.4
CRKL-202ENST00000411769 SYNDIG1LA6NDD5 238 aa17.54■□□□□ 0.4
CRKL-202ENST00000411769 FRG2CA6NGY1 282 aa17.54■□□□□ 0.4
CRKL-202ENST00000411769 C9orf172C9J069 976 aa17.54■□□□□ 0.4
CRKL-202ENST00000411769 TSPAN19P0C672 248 aa17.54■□□□□ 0.4
CRKL-202ENST00000411769 MYL12AP19105 171 aa17.54■□□□□ 0.4
CRKL-202ENST00000411769 CD79BP40259 229 aa17.54■□□□□ 0.4
CRKL-202ENST00000411769 NR0B1P51843 470 aaKnown RBP17.54■□□□□ 0.4
CRKL-202ENST00000411769 COPZ1P61923 177 aa17.54■□□□□ 0.4
CRKL-202ENST00000411769 IFITM2Q01629 132 aa17.54■□□□□ 0.4
CRKL-202ENST00000411769 HNRNPA0Q13151 305 aaKnown RBP17.54■□□□□ 0.4
CRKL-202ENST00000411769 EIPR1Q53HC9 387 aa17.54■□□□□ 0.4
CRKL-202ENST00000411769 TMEM205Q6UW68 189 aa17.54■□□□□ 0.4
CRKL-202ENST00000411769 SLC29A4Q7RTT9 530 aa17.54■□□□□ 0.4
CRKL-202ENST00000411769 CPEB2Q7Z5Q1 589 aaKnown RBP17.54■□□□□ 0.4
CRKL-202ENST00000411769 NR4A3Q92570 626 aa17.54■□□□□ 0.4
CRKL-202ENST00000411769 TIGARQ9NQ88 270 aa17.54■□□□□ 0.4
CRKL-202ENST00000411769 FLRT3Q9NZU0 649 aa17.54■□□□□ 0.4
CRKL-202ENST00000411769 CNIH4Q9P003 139 aa17.54■□□□□ 0.4
CRKL-202ENST00000411769 RBMX2Q9Y388 322 aaKnown RBP17.54■□□□□ 0.4
CRKL-202ENST00000411769 GRIP1Q9Y3R0 1128 aa17.54■□□□□ 0.4
CRKL-202ENST00000411769 AHCTF1Q8WYP5 2266 aa17.54■□□□□ 0.4
CRKL-202ENST00000411769 CCDC187A0A096LP49 1063 aa17.54■□□□□ 0.4
CRKL-202ENST00000411769 SPAARA0A1B0GVQ0 90 aa17.54■□□□□ 0.4
CRKL-202ENST00000411769 AP3D1O14617 1153 aa17.54■□□□□ 0.4
CRKL-202ENST00000411769 KLF7O75840 302 aaPredicted RBP17.54■□□□□ 0.4
CRKL-202ENST00000411769 THY1P04216 161 aa17.54■□□□□ 0.4
CRKL-202ENST00000411769 UMODP07911 640 aa17.54■□□□□ 0.4
CRKL-202ENST00000411769 PRG2P13727 222 aa17.54■□□□□ 0.4
CRKL-202ENST00000411769 SDC2P34741 201 aa17.54■□□□□ 0.4
CRKL-202ENST00000411769 IFNGR2P38484 337 aa17.54■□□□□ 0.4
CRKL-202ENST00000411769 MTNR1AP48039 350 aa17.54■□□□□ 0.4
CRKL-202ENST00000411769 DECR1Q16698 335 aa17.54■□□□□ 0.4
CRKL-202ENST00000411769 RSPO4Q2I0M5 234 aaPredicted RBP17.54■□□□□ 0.4
CRKL-202ENST00000411769 HLA-DQA1Q5Y7H0 255 aa17.54■□□□□ 0.4
CRKL-202ENST00000411769 TIPARPQ7Z3E1 657 aaKnown RBP17.54■□□□□ 0.4
CRKL-202ENST00000411769 GLRX5Q86SX6 157 aa17.54■□□□□ 0.4
CRKL-202ENST00000411769 OR4C3Q8NH37 302 aa17.54■□□□□ 0.4
CRKL-202ENST00000411769 FAM46AQ96IP4 442 aaKnown RBP17.54■□□□□ 0.4
CRKL-202ENST00000411769 NXT1Q9UKK6 140 aaKnown RBP17.54■□□□□ 0.4
CRKL-202ENST00000411769 EXOSC1Q9Y3B2 195 aaKnown RBP17.54■□□□□ 0.4
CRKL-202ENST00000411769 NPIPB9F8W1W9 429 aa17.53■□□□□ 0.4
CRKL-202ENST00000411769 SLC30A4O14863 429 aa17.53■□□□□ 0.4
CRKL-202ENST00000411769 CCNKO75909 580 aa17.53■□□□□ 0.4
CRKL-202ENST00000411769 DRD5P21918 477 aa17.53■□□□□ 0.4
CRKL-202ENST00000411769 AZGP1P25311 298 aaKnown RBP17.53■□□□□ 0.4
CRKL-202ENST00000411769 SLC9A3P48764 834 aa17.53■□□□□ 0.4
CRKL-202ENST00000411769 ZNF136P52737 540 aa17.53■□□□□ 0.4
CRKL-202ENST00000411769 CPEB4Q17RY0 729 aaKnown RBP eCLIP17.53■□□□□ 0.41e-19■□□□□ 9.2
CRKL-202ENST00000411769 HSDL2Q6YN16 418 aa17.53■□□□□ 0.4
CRKL-202ENST00000411769 ZNF730Q6ZMV8 503 aa17.53■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms