RNA–Protein interactions for RNA: ENST00000401607.6

CPNE1-205, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,795 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-205ENST00000401607 MOGAT1Q96PD6 335 aa23.3■■□□□ 1.32
CPNE1-205ENST00000401607 FUNDC2Q9BWH2 189 aa23.3■■□□□ 1.32
CPNE1-205ENST00000401607 CMC2Q9NRP2 79 aa23.3■■□□□ 1.32
CPNE1-205ENST00000401607 MRPS18AQ9NVS2 196 aaKnown RBP23.3■■□□□ 1.32
CPNE1-205ENST00000401607 PTTG2Q9NZH5 202 aa23.3■■□□□ 1.32
CPNE1-205ENST00000401607 KLRF1Q9NZS2 232 aa23.3■■□□□ 1.32
CPNE1-205ENST00000401607 BAIAP2Q9UQB8 552 aa23.3■■□□□ 1.32
CPNE1-205ENST00000401607 PCNX3Q9H6A9 2034 aa23.3■■□□□ 1.32
CPNE1-205ENST00000401607 H3BMQ9 156 aa23.29■■□□□ 1.32
CPNE1-205ENST00000401607 TERTO14746 1132 aaKnown RBP23.29■■□□□ 1.32
CPNE1-205ENST00000401607 TNFSF15O95150 251 aa23.29■■□□□ 1.32
CPNE1-205ENST00000401607 NDUFB2O95178 105 aa23.29■■□□□ 1.32
CPNE1-205ENST00000401607 F8A1P23610 371 aa23.29■■□□□ 1.32
CPNE1-205ENST00000401607 PCSK6P29122 969 aa23.29■■□□□ 1.32
CPNE1-205ENST00000401607 RPS15P62841 145 aaKnown RBP23.29■■□□□ 1.32
CPNE1-205ENST00000401607 LTBQ06643 244 aa23.29■■□□□ 1.32
CPNE1-205ENST00000401607 DNASE1L3Q13609 305 aa23.29■■□□□ 1.32
CPNE1-205ENST00000401607 FCRLBQ6BAA4 426 aa23.29■■□□□ 1.32
CPNE1-205ENST00000401607 KTI12Q96EK9 354 aaPredicted RBP23.29■■□□□ 1.32
CPNE1-205ENST00000401607 COG8Q96MW5 612 aa23.29■■□□□ 1.32
CPNE1-205ENST00000401607 FN3KQ9H479 309 aa23.29■■□□□ 1.32
CPNE1-205ENST00000401607 SPAARA0A1B0GVQ0 90 aa23.29■■□□□ 1.32
CPNE1-205ENST00000401607 TRMUO75648 421 aaKnown RBP23.29■■□□□ 1.32
CPNE1-205ENST00000401607 FTH1P19P0C7X4 201 aa23.29■■□□□ 1.32
CPNE1-205ENST00000401607 CXCR1P25024 350 aa23.29■■□□□ 1.32
CPNE1-205ENST00000401607 POLR2HP52434 150 aaKnown RBP23.29■■□□□ 1.32
CPNE1-205ENST00000401607 TMBIM6P55061 237 aa23.29■■□□□ 1.32
CPNE1-205ENST00000401607 SUMO3P55854 103 aaPredicted RBP23.29■■□□□ 1.32
CPNE1-205ENST00000401607 GXYLT1Q4G148 440 aa23.29■■□□□ 1.32
CPNE1-205ENST00000401607 ZNF362Q5T0B9 420 aaPredicted RBP23.29■■□□□ 1.32
CPNE1-205ENST00000401607 NXNL2Q5VZ03 156 aa23.29■■□□□ 1.32
CPNE1-205ENST00000401607 POMZP3Q6PJE2 187 aa23.29■■□□□ 1.32
CPNE1-205ENST00000401607 CXXC5Q7LFL8 322 aaKnown RBP23.29■■□□□ 1.32
CPNE1-205ENST00000401607 GRINAQ7Z429 371 aa23.29■■□□□ 1.32
CPNE1-205ENST00000401607 CPOQ8IVL8 374 aa23.29■■□□□ 1.32
CPNE1-205ENST00000401607 NLGN4YQ8NFZ3 816 aaPredicted RBP23.29■■□□□ 1.32
CPNE1-205ENST00000401607 OR52I1Q8NGK6 324 aa23.29■■□□□ 1.32
CPNE1-205ENST00000401607 LGALS12Q96DT0 336 aa23.29■■□□□ 1.32
CPNE1-205ENST00000401607 YIPF6Q96EC8 236 aa23.29■■□□□ 1.32
CPNE1-205ENST00000401607 TSC22D3Q99576 134 aa23.29■■□□□ 1.32
CPNE1-205ENST00000401607 TAPBPLQ9BX59 468 aa23.29■■□□□ 1.32
CPNE1-205ENST00000401607 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP23.29■■□□□ 1.32
CPNE1-205ENST00000401607 FAM183AA6NL82 134 aa23.28■■□□□ 1.32
CPNE1-205ENST00000401607 SNTNA6NMZ2 147 aa23.28■■□□□ 1.32
CPNE1-205ENST00000401607 MCIDASD6RGH6 385 aa23.28■■□□□ 1.32
CPNE1-205ENST00000401607 CDH11P55287 796 aa23.28■■□□□ 1.32
CPNE1-205ENST00000401607 TMEM44Q2T9K0 475 aa23.28■■□□□ 1.32
CPNE1-205ENST00000401607 SLC16A12Q6ZSM3 486 aa23.28■■□□□ 1.32
CPNE1-205ENST00000401607 IGFN1Q86VF2 1251 aa23.28■■□□□ 1.32
CPNE1-205ENST00000401607 ADGRG3Q86Y34 549 aa23.28■■□□□ 1.32
CPNE1-205ENST00000401607 RNFT2Q96EX2 444 aa23.28■■□□□ 1.32
CPNE1-205ENST00000401607 CDCP1Q9H5V8 836 aa23.28■■□□□ 1.32
CPNE1-205ENST00000401607 METTL7AQ9H8H3 244 aa23.28■■□□□ 1.32
CPNE1-205ENST00000401607 MED11Q9P086 117 aa23.28■■□□□ 1.32
CPNE1-205ENST00000401607 YARS2Q9Y2Z4 477 aaKnown RBP23.28■■□□□ 1.32
CPNE1-205ENST00000401607 TMED7-TICAM2A0A0A6YYA0 188 aa23.27■■□□□ 1.32
CPNE1-205ENST00000401607 M0R082 166 aa23.27■■□□□ 1.32
CPNE1-205ENST00000401607 DLSTP36957 453 aa23.27■■□□□ 1.32
CPNE1-205ENST00000401607 Q0VFX4 171 aa23.27■■□□□ 1.32
CPNE1-205ENST00000401607 PLBD1Q6P4A8 553 aa23.27■■□□□ 1.32
CPNE1-205ENST00000401607 ARMC10Q8N2F6 343 aa23.27■■□□□ 1.32
CPNE1-205ENST00000401607 TAAR8Q969N4 342 aa23.27■■□□□ 1.32
CPNE1-205ENST00000401607 CRELD1Q96HD1 420 aa23.27■■□□□ 1.32
CPNE1-205ENST00000401607 CHRNA9Q9UGM1 479 aa23.27■■□□□ 1.32
CPNE1-205ENST00000401607 FBXL4Q9UKA2 621 aa23.27■■□□□ 1.32
CPNE1-205ENST00000401607 TMED7Q9Y3B3 224 aa23.27■■□□□ 1.32
CPNE1-205ENST00000401607 WIF1Q9Y5W5 379 aa23.27■■□□□ 1.32
CPNE1-205ENST00000401607 CHCHD2Q9Y6H1 151 aaPredicted RBP23.27■■□□□ 1.32
CPNE1-205ENST00000401607 IGLV3-32A0A0A0MS00 114 aa23.27■■□□□ 1.32
CPNE1-205ENST00000401607 TMEM72A0PK05 275 aa23.27■■□□□ 1.32
CPNE1-205ENST00000401607 ZC3H12DA2A288 527 aaKnown RBP23.27■■□□□ 1.32
CPNE1-205ENST00000401607 ATE1O95260 518 aa23.27■■□□□ 1.32
CPNE1-205ENST00000401607 HPP00738 406 aa23.27■■□□□ 1.32
CPNE1-205ENST00000401607 ASAH2BP0C7U1 165 aa23.27■■□□□ 1.32
CPNE1-205ENST00000401607 PEPDP12955 493 aa23.27■■□□□ 1.32
CPNE1-205ENST00000401607 PRKCAP17252 672 aa23.27■■□□□ 1.32
CPNE1-205ENST00000401607 CASP3P42574 277 aa23.27■■□□□ 1.32
CPNE1-205ENST00000401607 MTNR1AP48039 350 aa23.27■■□□□ 1.32
CPNE1-205ENST00000401607 ANKRD13BQ86YJ7 626 aa23.27■■□□□ 1.32
CPNE1-205ENST00000401607 ALDH16A1Q8IZ83 802 aa23.27■■□□□ 1.32
CPNE1-205ENST00000401607 C10orf53Q8N6V4 93 aa23.27■■□□□ 1.32
CPNE1-205ENST00000401607 RFKQ969G6 155 aa23.27■■□□□ 1.32
CPNE1-205ENST00000401607 NANSQ9NR45 359 aa23.27■■□□□ 1.32
CPNE1-205ENST00000401607 PPP4R1LQ9P1A2 415 aa23.27■■□□□ 1.32
CPNE1-205ENST00000401607 CLEC2DQ9UHP7 191 aa23.27■■□□□ 1.32
CPNE1-205ENST00000401607 ENPP5Q9UJA9 477 aa23.27■■□□□ 1.32
CPNE1-205ENST00000401607 DIMT1Q9UNQ2 313 aaKnown RBP23.27■■□□□ 1.32
CPNE1-205ENST00000401607 HIF3AQ9Y2N7 669 aa23.27■■□□□ 1.32
CPNE1-205ENST00000401607 MPDZO75970 2070 aa23.26■■□□□ 1.31
CPNE1-205ENST00000401607 C21orf140B9A014 251 aa23.26■■□□□ 1.31
CPNE1-205ENST00000401607 SUSD5O60279 629 aa23.26■■□□□ 1.31
CPNE1-205ENST00000401607 FOXD2O60548 495 aaPredicted RBP23.26■■□□□ 1.31
CPNE1-205ENST00000401607 RAD1O60671 282 aa23.26■■□□□ 1.31
CPNE1-205ENST00000401607 HTR1FP30939 366 aa23.26■■□□□ 1.31
CPNE1-205ENST00000401607 MLF1P58340 268 aa23.26■■□□□ 1.31
CPNE1-205ENST00000401607 RAB40BQ12829 278 aa23.26■■□□□ 1.31
CPNE1-205ENST00000401607 IL10RAQ13651 578 aa23.26■■□□□ 1.31
CPNE1-205ENST00000401607 DOC2BQ14184 412 aa23.26■■□□□ 1.31
CPNE1-205ENST00000401607 KLHL22Q53GT1 634 aa23.26■■□□□ 1.31
CPNE1-205ENST00000401607 RNLSQ5VYX0 342 aa23.26■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms