RNA–Protein interactions for RNA: ENST00000397204.8

CAPN3-208, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 1,237 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-208ENST00000397204 TAS2R16Q9NYV7 291 aa7.69□□□□□ -1.18
CAPN3-208ENST00000397204 MID2Q9UJV3 735 aa7.69□□□□□ -1.18
CAPN3-208ENST00000397204 TRAPPC4Q9Y296 219 aa7.69□□□□□ -1.18
CAPN3-208ENST00000397204 TRAF6Q9Y4K3 522 aa7.69□□□□□ -1.18
CAPN3-208ENST00000397204 SPIN1Q9Y657 262 aaPredicted RBP7.69□□□□□ -1.18
CAPN3-208ENST00000397204 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP7.69□□□□□ -1.18
CAPN3-208ENST00000397204 NUP214P35658 2090 aaPredicted RBP7.69□□□□□ -1.18
CAPN3-208ENST00000397204 ZNF716A6NP11 495 aa7.68□□□□□ -1.18
CAPN3-208ENST00000397204 NDUFS8O00217 210 aa7.68□□□□□ -1.18
CAPN3-208ENST00000397204 PEX11AO75192 247 aa7.68□□□□□ -1.18
CAPN3-208ENST00000397204 STX11O75558 287 aa7.68□□□□□ -1.18
CAPN3-208ENST00000397204 RAD51DO75771 328 aa7.68□□□□□ -1.18
CAPN3-208ENST00000397204 PMS2P2O95744 297 aa7.68□□□□□ -1.18
CAPN3-208ENST00000397204 C6orf47O95873 294 aa7.68□□□□□ -1.18
CAPN3-208ENST00000397204 CSTAP01040 98 aa7.68□□□□□ -1.18
CAPN3-208ENST00000397204 IGHV3-9P01782 118 aa7.68□□□□□ -1.18
CAPN3-208ENST00000397204 GUSBP08236 651 aa7.68□□□□□ -1.18
CAPN3-208ENST00000397204 IGHV4-31P0DP07 118 aa7.68□□□□□ -1.18
CAPN3-208ENST00000397204 MATN1P21941 496 aa7.68□□□□□ -1.18
CAPN3-208ENST00000397204 CCR4P51679 360 aa7.68□□□□□ -1.18
CAPN3-208ENST00000397204 SLC16A1P53985 500 aa7.68□□□□□ -1.18
CAPN3-208ENST00000397204 MERTKQ12866 999 aa7.68□□□□□ -1.18
CAPN3-208ENST00000397204 SYT14P1Q58G82 188 aa7.68□□□□□ -1.18
CAPN3-208ENST00000397204 PDZK1Q5T2W1 519 aa7.68□□□□□ -1.18
CAPN3-208ENST00000397204 FAM166AQ6J272 317 aa7.68□□□□□ -1.18
CAPN3-208ENST00000397204 Q6ZS46 218 aa7.68□□□□□ -1.18
CAPN3-208ENST00000397204 C10orf107Q8IVU9 208 aa7.68□□□□□ -1.18
CAPN3-208ENST00000397204 RIMKLAQ8IXN7 391 aa7.68□□□□□ -1.18
CAPN3-208ENST00000397204 DDIASQ8IXT1 998 aa7.68□□□□□ -1.18
CAPN3-208ENST00000397204 TMCO5AQ8N6Q1 288 aa7.68□□□□□ -1.18
CAPN3-208ENST00000397204 CITED4Q96RK1 184 aa7.68□□□□□ -1.18
CAPN3-208ENST00000397204 TXLNGYQ9BZA5 131 aa7.68□□□□□ -1.18
CAPN3-208ENST00000397204 PPCSQ9HAB8 311 aa7.68□□□□□ -1.18
CAPN3-208ENST00000397204 EML4Q9HC35 981 aaKnown RBP7.68□□□□□ -1.18
CAPN3-208ENST00000397204 MALT1Q9UDY8 824 aa7.68□□□□□ -1.18
CAPN3-208ENST00000397204 KCNE5Q9UJ90 142 aa7.68□□□□□ -1.18
CAPN3-208ENST00000397204 FIS1Q9Y3D6 152 aa7.68□□□□□ -1.18
CAPN3-208ENST00000397204 HDGFL3Q9Y3E1 203 aa7.68□□□□□ -1.18
CAPN3-208ENST00000397204 ATP23Q9Y6H3 246 aa7.68□□□□□ -1.18
CAPN3-208ENST00000397204 M0R1B8 84 aa7.67□□□□□ -1.18
CAPN3-208ENST00000397204 PDLIM1O00151 329 aa7.67□□□□□ -1.18
CAPN3-208ENST00000397204 PIP5K1BO14986 540 aa7.67□□□□□ -1.18
CAPN3-208ENST00000397204 CFLARO15519 480 aa7.67□□□□□ -1.18
CAPN3-208ENST00000397204 FCMRO60667 390 aa7.67□□□□□ -1.18
CAPN3-208ENST00000397204 EIF1BO60739 113 aaKnown RBP7.67□□□□□ -1.18
CAPN3-208ENST00000397204 UGT2B17O75795 530 aa7.67□□□□□ -1.18
CAPN3-208ENST00000397204 CYP7B1O75881 506 aa7.67□□□□□ -1.18
CAPN3-208ENST00000397204 AGR2O95994 175 aa7.67□□□□□ -1.18
CAPN3-208ENST00000397204 FAM153BP0C7A2 387 aa7.67□□□□□ -1.18
CAPN3-208ENST00000397204 TFPIP10646 304 aa7.67□□□□□ -1.18
CAPN3-208ENST00000397204 SRD5A1P18405 259 aa7.67□□□□□ -1.18
CAPN3-208ENST00000397204 KRT4P19013 534 aa7.67□□□□□ -1.18
CAPN3-208ENST00000397204 PAX7P23759 505 aa7.67□□□□□ -1.18
CAPN3-208ENST00000397204 NTF4P34130 210 aa7.67□□□□□ -1.18
CAPN3-208ENST00000397204 MAGEA8P43361 318 aa7.67□□□□□ -1.18
CAPN3-208ENST00000397204 PDLIM4P50479 330 aa7.67□□□□□ -1.18
CAPN3-208ENST00000397204 H3F3AP84243 136 aa7.67□□□□□ -1.18
CAPN3-208ENST00000397204 TGFBR3Q03167 851 aa7.67□□□□□ -1.18
CAPN3-208ENST00000397204 SQLEQ14534 574 aa7.67□□□□□ -1.18
CAPN3-208ENST00000397204 GPR68Q15743 365 aa7.67□□□□□ -1.18
CAPN3-208ENST00000397204 ARHGAP11BQ3KRB8 267 aa7.67□□□□□ -1.18
CAPN3-208ENST00000397204 FAM153CQ494X1 144 aa7.67□□□□□ -1.18
CAPN3-208ENST00000397204 ATP6AP1LQ52LC2 224 aa7.67□□□□□ -1.18
CAPN3-208ENST00000397204 C6orf136Q5SQH8 315 aa7.67□□□□□ -1.18
CAPN3-208ENST00000397204 IL23RQ5VWK5 629 aa7.67□□□□□ -1.18
CAPN3-208ENST00000397204 LIPNQ5VXI9 398 aa7.67□□□□□ -1.18
CAPN3-208ENST00000397204 ABLIM2Q6H8Q1 611 aa7.67□□□□□ -1.18
CAPN3-208ENST00000397204 B3GLCTQ6Y288 498 aa7.67□□□□□ -1.18
CAPN3-208ENST00000397204 C6orf120Q7Z4R8 191 aa7.67□□□□□ -1.18
CAPN3-208ENST00000397204 C17orf78Q8N4C9 275 aa7.67□□□□□ -1.18
CAPN3-208ENST00000397204 WDR31Q8NA23 367 aa7.67□□□□□ -1.18
CAPN3-208ENST00000397204 ZNF540Q8NDQ6 660 aa7.67□□□□□ -1.18
CAPN3-208ENST00000397204 C1orf162Q8NEQ5 155 aaPredicted RBP7.67□□□□□ -1.18
CAPN3-208ENST00000397204 PIGXQ8TBF5 258 aa7.67□□□□□ -1.18
CAPN3-208ENST00000397204 TWIST2Q8WVJ9 160 aa7.67□□□□□ -1.18
CAPN3-208ENST00000397204 PMM1Q92871 262 aa7.67□□□□□ -1.18
CAPN3-208ENST00000397204 C19orf24Q9BVV8 132 aa7.67□□□□□ -1.18
CAPN3-208ENST00000397204 CCDC106Q9BWC9 280 aa7.67□□□□□ -1.18
CAPN3-208ENST00000397204 C1QTNF6Q9BXI9 259 aa7.67□□□□□ -1.18
CAPN3-208ENST00000397204 C12orf65Q9H3J6 166 aaKnown RBP7.67□□□□□ -1.18
CAPN3-208ENST00000397204 MANSC1Q9H8J5 431 aa7.67□□□□□ -1.18
CAPN3-208ENST00000397204 EXD2Q9NVH0 621 aa7.67□□□□□ -1.18
CAPN3-208ENST00000397204 CHRNA9Q9UGM1 479 aa7.67□□□□□ -1.18
CAPN3-208ENST00000397204 DCTN4Q9UJW0 460 aa7.67□□□□□ -1.18
CAPN3-208ENST00000397204 MKLN1Q9UL63 735 aa7.67□□□□□ -1.18
CAPN3-208ENST00000397204 KCNS2Q9ULS6 477 aa7.67□□□□□ -1.18
CAPN3-208ENST00000397204 SLC35A3Q9Y2D2 325 aa7.67□□□□□ -1.18
CAPN3-208ENST00000397204 AMDHD2Q9Y303 409 aa7.67□□□□□ -1.18
CAPN3-208ENST00000397204 HEATR1Q9H583 2144 aaKnown RBP7.67□□□□□ -1.18
CAPN3-208ENST00000397204 MALRD1Q5VYJ5 2156 aa7.66□□□□□ -1.18
CAPN3-208ENST00000397204 LOC100289279A0A1B0GTE1 492 aa7.66□□□□□ -1.18
CAPN3-208ENST00000397204 LOC390937A0A1W2PQ73 354 aa7.66□□□□□ -1.18
CAPN3-208ENST00000397204 A0A1W2PR80 420 aa7.66□□□□□ -1.18
CAPN3-208ENST00000397204 VWC2LB2RUY7 222 aa7.66□□□□□ -1.18
CAPN3-208ENST00000397204 NPHS1O60500 1241 aa7.66□□□□□ -1.18
CAPN3-208ENST00000397204 SLU7O95391 586 aaKnown RBP7.66□□□□□ -1.18
CAPN3-208ENST00000397204 ITGA5P08648 1049 aa7.66□□□□□ -1.18
CAPN3-208ENST00000397204 UBTFL6P0CB48 400 aaPredicted RBP7.66□□□□□ -1.18
CAPN3-208ENST00000397204 HNF1AP20823 631 aa7.66□□□□□ -1.18
CAPN3-208ENST00000397204 PGM1P36871 562 aa7.66□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms