RNA–Protein interactions for RNA: ENST00000397102.5

SEC13-206, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 3

Gene SEC13, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-206ENST00000397102 KLF11O14901 512 aa12.99□□□□□ -0.33
SEC13-206ENST00000397102 SCAMP2O15127 329 aaKnown RBP12.99□□□□□ -0.33
SEC13-206ENST00000397102 AK1P00568 194 aa12.99□□□□□ -0.33
SEC13-206ENST00000397102 GCAP28676 217 aa12.99□□□□□ -0.33
SEC13-206ENST00000397102 HPCAL1P37235 193 aa12.99□□□□□ -0.33
SEC13-206ENST00000397102 RPL3P39023 403 aaKnown RBP12.99□□□□□ -0.33
SEC13-206ENST00000397102 SLC1A3P43003 542 aa12.99□□□□□ -0.33
SEC13-206ENST00000397102 OR2B6P58173 313 aa12.99□□□□□ -0.33
SEC13-206ENST00000397102 TRIP10Q15642 601 aa12.99□□□□□ -0.33
SEC13-206ENST00000397102 GPR68Q15743 365 aa12.99□□□□□ -0.33
SEC13-206ENST00000397102 SPDYE7PQ495Y7 208 aa12.99□□□□□ -0.33
SEC13-206ENST00000397102 CFAP157Q5JU67 520 aa12.99□□□□□ -0.33
SEC13-206ENST00000397102 VHLLQ6RSH7 139 aa12.99□□□□□ -0.33
SEC13-206ENST00000397102 EIF3MQ7L2H7 374 aaKnown RBP12.99□□□□□ -0.33
SEC13-206ENST00000397102 GRINAQ7Z429 371 aa12.99□□□□□ -0.33
SEC13-206ENST00000397102 OR5D16Q8NGK9 328 aa12.99□□□□□ -0.33
SEC13-206ENST00000397102 ZNF563Q8TA94 476 aa12.99□□□□□ -0.33
SEC13-206ENST00000397102 ACMSDQ8TDX5 336 aa12.99□□□□□ -0.33
SEC13-206ENST00000397102 WDR60Q8WVS4 1066 aa12.99□□□□□ -0.33
SEC13-206ENST00000397102 TMEM45BQ96B21 275 aa12.99□□□□□ -0.33
SEC13-206ENST00000397102 MOAP1Q96BY2 351 aa12.99□□□□□ -0.33
SEC13-206ENST00000397102 OR11A1Q9GZK7 315 aa12.99□□□□□ -0.33
SEC13-206ENST00000397102 EMCNQ9ULC0 261 aa12.99□□□□□ -0.33
SEC13-206ENST00000397102 CENPVL1A0A0U1RR11 272 aa12.98□□□□□ -0.33
SEC13-206ENST00000397102 LSM1O15116 133 aaKnown RBP12.98□□□□□ -0.33
SEC13-206ENST00000397102 EIF1BO60739 113 aaKnown RBP12.98□□□□□ -0.33
SEC13-206ENST00000397102 STX11O75558 287 aa12.98□□□□□ -0.33
SEC13-206ENST00000397102 UGT2B17O75795 530 aa12.98□□□□□ -0.33
SEC13-206ENST00000397102 LAMP1P11279 417 aa12.98□□□□□ -0.33
SEC13-206ENST00000397102 BCKDHAP12694 445 aa12.98□□□□□ -0.33
SEC13-206ENST00000397102 IFNGR1P15260 489 aa12.98□□□□□ -0.33
SEC13-206ENST00000397102 CDH2P19022 906 aaPredicted RBP12.98□□□□□ -0.33
SEC13-206ENST00000397102 KHKP50053 298 aa12.98□□□□□ -0.33
SEC13-206ENST00000397102 HILS1P60008 231 aa12.98□□□□□ -0.33
SEC13-206ENST00000397102 SLC35A1P78382 337 aa12.98□□□□□ -0.33
SEC13-206ENST00000397102 NAAAQ02083 359 aa12.98□□□□□ -0.33
SEC13-206ENST00000397102 CCNIQ14094 377 aa12.98□□□□□ -0.33
SEC13-206ENST00000397102 SLC17A1Q14916 467 aa12.98□□□□□ -0.33
SEC13-206ENST00000397102 C3orf36Q3SXR2 165 aa12.98□□□□□ -0.33
SEC13-206ENST00000397102 TBRG1Q3YBR2 411 aa12.98□□□□□ -0.33
SEC13-206ENST00000397102 PRR31Q5SQ13 230 aa12.98□□□□□ -0.33
SEC13-206ENST00000397102 LIPMQ5VYY2 423 aa12.98□□□□□ -0.33
SEC13-206ENST00000397102 USP43Q70EL4 1123 aa12.98□□□□□ -0.33
SEC13-206ENST00000397102 ABHD12BQ7Z5M8 362 aaPredicted RBP12.98□□□□□ -0.33
SEC13-206ENST00000397102 ADGRG3Q86Y34 549 aa12.98□□□□□ -0.33
SEC13-206ENST00000397102 POMGNT2Q8NAT1 580 aa12.98□□□□□ -0.33
SEC13-206ENST00000397102 FAM71CQ8NEG0 241 aa12.98□□□□□ -0.33
SEC13-206ENST00000397102 NUP37Q8NFH4 326 aa12.98□□□□□ -0.33
SEC13-206ENST00000397102 OR7A2PQ8NGA2 310 aa12.98□□□□□ -0.33
SEC13-206ENST00000397102 OR4F15Q8NGB8 312 aa12.98□□□□□ -0.33
SEC13-206ENST00000397102 UBASH3BQ8TF42 649 aa12.98□□□□□ -0.33
SEC13-206ENST00000397102 FMO2Q99518 471 aa12.98□□□□□ -0.33
SEC13-206ENST00000397102 NAA11Q9BSU3 229 aaPredicted RBP12.98□□□□□ -0.33
SEC13-206ENST00000397102 RBM4Q9BWF3 364 aaKnown RBP12.98□□□□□ -0.33
SEC13-206ENST00000397102 ZNF442Q9H7R0 627 aa12.98□□□□□ -0.33
SEC13-206ENST00000397102 CRNNQ9UBG3 495 aaPredicted RBP12.98□□□□□ -0.33
SEC13-206ENST00000397102 DCDC2Q9UHG0 476 aa12.98□□□□□ -0.33
SEC13-206ENST00000397102 PCDHB10Q9UN67 800 aa12.98□□□□□ -0.33
SEC13-206ENST00000397102 DUXAA6NLW8 204 aa12.97□□□□□ -0.33
SEC13-206ENST00000397102 hCG_2039718K7EN88 272 aa12.97□□□□□ -0.33
SEC13-206ENST00000397102 FCMRO60667 390 aa12.97□□□□□ -0.33
SEC13-206ENST00000397102 C6orf47O95873 294 aa12.97□□□□□ -0.33
SEC13-206ENST00000397102 CREB1P16220 341 aa12.97□□□□□ -0.33
SEC13-206ENST00000397102 PGM1P36871 562 aa12.97□□□□□ -0.33
SEC13-206ENST00000397102 DNAJB13P59910 316 aa12.97□□□□□ -0.33
SEC13-206ENST00000397102 LSM12Q3MHD2 195 aaKnown RBP12.97□□□□□ -0.33
SEC13-206ENST00000397102 GALNTL6Q49A17 601 aa12.97□□□□□ -0.33
SEC13-206ENST00000397102 PDLIM3Q53GG5 364 aaPredicted RBP12.97□□□□□ -0.33
SEC13-206ENST00000397102 ANKRD16Q6P6B7 361 aa12.97□□□□□ -0.33
SEC13-206ENST00000397102 SHQ1Q6PI26 577 aaKnown RBP12.97□□□□□ -0.33
SEC13-206ENST00000397102 PEG10Q86TG7 708 aaKnown RBP12.97□□□□□ -0.33
SEC13-206ENST00000397102 NATD1Q8N6N6 113 aa12.97□□□□□ -0.33
SEC13-206ENST00000397102 OR1K1Q8NGR3 316 aa12.97□□□□□ -0.33
SEC13-206ENST00000397102 OIT3Q8WWZ8 545 aa12.97□□□□□ -0.33
SEC13-206ENST00000397102 DOK1Q99704 481 aa12.97□□□□□ -0.33
SEC13-206ENST00000397102 ZNF350Q9GZX5 532 aa12.97□□□□□ -0.33
SEC13-206ENST00000397102 TUBB1Q9H4B7 451 aa12.97□□□□□ -0.33
SEC13-206ENST00000397102 ATAD3AQ9NVI7 634 aa12.97□□□□□ -0.33
SEC13-206ENST00000397102 TMEM45AQ9NWC5 275 aa12.97□□□□□ -0.33
SEC13-206ENST00000397102 MKLN1Q9UL63 735 aa12.97□□□□□ -0.33
SEC13-206ENST00000397102 PCDHGB4Q9UN71 923 aa12.97□□□□□ -0.33
SEC13-206ENST00000397102 SLC35A3Q9Y2D2 325 aa12.97□□□□□ -0.33
SEC13-206ENST00000397102 GRIP1Q9Y3R0 1128 aa12.97□□□□□ -0.33
SEC13-206ENST00000397102 SPEF1Q9Y4P9 236 aa12.97□□□□□ -0.33
SEC13-206ENST00000397102 ARPC4-TTLL3A0A0A6YYG9 625 aa12.96□□□□□ -0.33
SEC13-206ENST00000397102 VSTM5A8MXK1 200 aa12.96□□□□□ -0.33
SEC13-206ENST00000397102 TMEM114B3SHH9 223 aa12.96□□□□□ -0.33
SEC13-206ENST00000397102 AZIN1O14977 448 aa12.96□□□□□ -0.33
SEC13-206ENST00000397102 RGS9O75916 674 aaPredicted RBP12.96□□□□□ -0.33
SEC13-206ENST00000397102 LINC00032P0C843 101 aa12.96□□□□□ -0.33
SEC13-206ENST00000397102 CECR9P0C854 216 aa12.96□□□□□ -0.33
SEC13-206ENST00000397102 IMPDH2P12268 514 aa12.96□□□□□ -0.33
SEC13-206ENST00000397102 CALCRP30988 508 aa12.96□□□□□ -0.33
SEC13-206ENST00000397102 RYKP34925 604 aa12.96□□□□□ -0.33
SEC13-206ENST00000397102 LIMS1P48059 325 aa12.96□□□□□ -0.33
SEC13-206ENST00000397102 ARFIP2P53365 341 aa12.96□□□□□ -0.33
SEC13-206ENST00000397102 UBE2NP61088 152 aaKnown RBP12.96□□□□□ -0.33
SEC13-206ENST00000397102 ADRM1Q16186 407 aa12.96□□□□□ -0.33
SEC13-206ENST00000397102 ARHGAP11BQ3KRB8 267 aa12.96□□□□□ -0.33
SEC13-206ENST00000397102 PAQR6Q6TCH4 344 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms