RNA–Protein interactions for RNA: ENST00000396355.5

NDE1-202, Transcript of nudE neurodevelopment protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDE1, Length 3,936 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-202ENST00000396355 TET1Q8NFU7 2136 aa7.85□□□□□ -1.15
NDE1-202ENST00000396355 C5orf42Q9H799 3197 aa7.85□□□□□ -1.15
NDE1-202ENST00000396355 NCOR2Q9Y618 2525 aa7.85□□□□□ -1.15
NDE1-202ENST00000396355 TRAV34A0A0B4J273 112 aa7.85□□□□□ -1.15
NDE1-202ENST00000396355 ZNF320A2RRD8 509 aa7.85□□□□□ -1.15
NDE1-202ENST00000396355 MCRIP1C9JLW8 97 aa7.85□□□□□ -1.15
NDE1-202ENST00000396355 ZNF587BE7ETH6 402 aa7.85□□□□□ -1.15
NDE1-202ENST00000396355 F5H5T6 163 aa7.85□□□□□ -1.15
NDE1-202ENST00000396355 SOX30O94993 753 aa7.85□□□□□ -1.15
NDE1-202ENST00000396355 S1PR4O95977 384 aa7.85□□□□□ -1.15
NDE1-202ENST00000396355 B3GALT4O96024 378 aa7.85□□□□□ -1.15
NDE1-202ENST00000396355 IFNA6P05013 189 aa7.85□□□□□ -1.15
NDE1-202ENST00000396355 EDNRAP25101 427 aa7.85□□□□□ -1.15
NDE1-202ENST00000396355 AGTR1P30556 359 aa7.85□□□□□ -1.15
NDE1-202ENST00000396355 SOX2P48431 317 aa7.85□□□□□ -1.15
NDE1-202ENST00000396355 EVX1P49640 407 aa7.85□□□□□ -1.15
NDE1-202ENST00000396355 GPR143P51810 404 aa7.85□□□□□ -1.15
NDE1-202ENST00000396355 RPS27AP62979 156 aaKnown RBP7.85□□□□□ -1.15
NDE1-202ENST00000396355 UBA52P62987 128 aaKnown RBP7.85□□□□□ -1.15
NDE1-202ENST00000396355 HYAL1Q12794 435 aa7.85□□□□□ -1.15
NDE1-202ENST00000396355 COL9A2Q14055 689 aaPredicted RBP7.85□□□□□ -1.15
NDE1-202ENST00000396355 VAMP3Q15836 100 aa7.85□□□□□ -1.15
NDE1-202ENST00000396355 NKPD1Q17RQ9 610 aa7.85□□□□□ -1.15
NDE1-202ENST00000396355 C18orf21Q32NC0 220 aaPredicted RBP7.85□□□□□ -1.15
NDE1-202ENST00000396355 SIRPB2Q5JXA9 342 aa7.85□□□□□ -1.15
NDE1-202ENST00000396355 DEGS2Q6QHC5 323 aa7.85□□□□□ -1.15
NDE1-202ENST00000396355 NXPE4Q6UWF7 544 aa7.85□□□□□ -1.15
NDE1-202ENST00000396355 MRPL10Q7Z7H8 261 aaKnown RBP7.85□□□□□ -1.15
NDE1-202ENST00000396355 ZNF511Q8NB15 262 aa7.85□□□□□ -1.15
NDE1-202ENST00000396355 CHST4Q8NCG5 386 aa7.85□□□□□ -1.15
NDE1-202ENST00000396355 OR8J3Q8NGG0 315 aa7.85□□□□□ -1.15
NDE1-202ENST00000396355 ARRDC2Q8TBH0 407 aa7.85□□□□□ -1.15
NDE1-202ENST00000396355 SMARCD2Q92925 531 aa7.85□□□□□ -1.15
NDE1-202ENST00000396355 IGSF8Q969P0 613 aa7.85□□□□□ -1.15
NDE1-202ENST00000396355 AIF1LQ9BQI0 150 aa7.85□□□□□ -1.15
NDE1-202ENST00000396355 TM6SF2Q9BZW4 377 aa7.85□□□□□ -1.15
NDE1-202ENST00000396355 SLC25A51Q9H1U9 297 aa7.85□□□□□ -1.15
NDE1-202ENST00000396355 SYT4Q9H2B2 425 aa7.85□□□□□ -1.15
NDE1-202ENST00000396355 MARCH2Q9P0N8 246 aa7.85□□□□□ -1.15
NDE1-202ENST00000396355 UXTQ9UBK9 157 aaPredicted RBP7.85□□□□□ -1.15
NDE1-202ENST00000396355 ARL5AQ9Y689 179 aa7.85□□□□□ -1.15
NDE1-202ENST00000396355 HYKKA2RU49 373 aa7.84□□□□□ -1.15
NDE1-202ENST00000396355 LANCL1O43813 399 aa7.84□□□□□ -1.15
NDE1-202ENST00000396355 OR2C1O95371 312 aa7.84□□□□□ -1.15
NDE1-202ENST00000396355 CXCL10P02778 98 aa7.84□□□□□ -1.15
NDE1-202ENST00000396355 GBAP04062 536 aa7.84□□□□□ -1.15
NDE1-202ENST00000396355 ASGR2P07307 311 aa7.84□□□□□ -1.15
NDE1-202ENST00000396355 PTHLHP12272 177 aa7.84□□□□□ -1.15
NDE1-202ENST00000396355 MTHFD2P13995 350 aa7.84□□□□□ -1.15
NDE1-202ENST00000396355 LAG3P18627 525 aa7.84□□□□□ -1.15
NDE1-202ENST00000396355 CXCL2P19875 107 aa7.84□□□□□ -1.15
NDE1-202ENST00000396355 ITPKAP23677 461 aa7.84□□□□□ -1.15
NDE1-202ENST00000396355 WNT4P56705 351 aa7.84□□□□□ -1.15
NDE1-202ENST00000396355 MS4A13Q5J8X5 152 aa7.84□□□□□ -1.15
NDE1-202ENST00000396355 LAIR1Q6GTX8 287 aa7.84□□□□□ -1.15
NDE1-202ENST00000396355 EIF5AL1Q6IS14 154 aaKnown RBP7.84□□□□□ -1.15
NDE1-202ENST00000396355 LPCAT3Q6P1A2 487 aa7.84□□□□□ -1.15
NDE1-202ENST00000396355 ZNF627Q7L945 461 aa7.84□□□□□ -1.15
NDE1-202ENST00000396355 C12orf40Q86WS4 652 aa7.84□□□□□ -1.15
NDE1-202ENST00000396355 C12orf76Q8N812 135 aaPredicted RBP7.84□□□□□ -1.15
NDE1-202ENST00000396355 L3MBTL4Q8NA19 623 aa7.84□□□□□ -1.15
NDE1-202ENST00000396355 KREMEN2Q8NCW0 462 aa7.84□□□□□ -1.15
NDE1-202ENST00000396355 OR4C5Q8NGB2 326 aa7.84□□□□□ -1.15
NDE1-202ENST00000396355 OR6K2Q8NGY2 324 aa7.84□□□□□ -1.15
NDE1-202ENST00000396355 NFKBIDQ8NI38 313 aa7.84□□□□□ -1.15
NDE1-202ENST00000396355 XAGE5Q8WWM1 108 aa7.84□□□□□ -1.15
NDE1-202ENST00000396355 MTERF1Q99551 399 aaKnown RBP7.84□□□□□ -1.15
NDE1-202ENST00000396355 MAPKAP1Q9BPZ7 522 aa7.84□□□□□ -1.15
NDE1-202ENST00000396355 CBLN4Q9NTU7 201 aa7.84□□□□□ -1.15
NDE1-202ENST00000396355 SPG21Q9NZD8 308 aa7.84□□□□□ -1.15
NDE1-202ENST00000396355 CD84Q9UIB8 345 aa7.84□□□□□ -1.15
NDE1-202ENST00000396355 DIDO1Q9BTC0 2240 aaKnown RBP7.84□□□□□ -1.15
NDE1-202ENST00000396355 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP7.84□□□□□ -1.15
NDE1-202ENST00000396355 A6NNC1 897 aa7.84□□□□□ -1.15
NDE1-202ENST00000396355 ZNF593O00488 134 aaPredicted RBP7.84□□□□□ -1.15
NDE1-202ENST00000396355 AIFM1O95831 613 aa7.84□□□□□ -1.15
NDE1-202ENST00000396355 EPXP11678 715 aa7.84□□□□□ -1.15
NDE1-202ENST00000396355 RASGEF1BQ0VAM2 473 aa7.84□□□□□ -1.15
NDE1-202ENST00000396355 ZNF177Q13360 481 aaPredicted RBP7.84□□□□□ -1.15
NDE1-202ENST00000396355 ABRAXAS2Q15018 415 aa7.84□□□□□ -1.15
NDE1-202ENST00000396355 OR4D1Q15615 310 aa7.84□□□□□ -1.15
NDE1-202ENST00000396355 TOMM34Q15785 309 aaPredicted RBP7.84□□□□□ -1.15
NDE1-202ENST00000396355 Q6ZTK2 550 aa7.84□□□□□ -1.15
NDE1-202ENST00000396355 ZC3HAV1Q7Z2W4 902 aaKnown RBP7.84□□□□□ -1.15
NDE1-202ENST00000396355 C6orf120Q7Z4R8 191 aa7.84□□□□□ -1.15
NDE1-202ENST00000396355 PHYKPLQ8IUZ5 450 aa7.84□□□□□ -1.15
NDE1-202ENST00000396355 ALX4Q9H161 411 aaPredicted RBP7.84□□□□□ -1.15
NDE1-202ENST00000396355 ATG5Q9H1Y0 275 aa7.84□□□□□ -1.15
NDE1-202ENST00000396355 MIXL1Q9H2W2 232 aa7.84□□□□□ -1.15
NDE1-202ENST00000396355 HHATLQ9HCP6 504 aa7.84□□□□□ -1.15
NDE1-202ENST00000396355 NDRG4Q9ULP0 352 aaKnown RBP7.84□□□□□ -1.15
NDE1-202ENST00000396355 PLEKHM1Q9Y4G2 1056 aa7.84□□□□□ -1.15
NDE1-202ENST00000396355 LOC101059915A0A1B0GWI6 518 aaPredicted RBP7.84□□□□□ -1.15
NDE1-202ENST00000396355 TMEM82A0PJX8 343 aa7.84□□□□□ -1.15
NDE1-202ENST00000396355 PMS2P1A4D2B8 440 aa7.84□□□□□ -1.15
NDE1-202ENST00000396355 SYT5O00445 386 aa7.84□□□□□ -1.15
NDE1-202ENST00000396355 RBBP9O75884 186 aa7.84□□□□□ -1.15
NDE1-202ENST00000396355 SFTPBP07988 381 aa7.84□□□□□ -1.15
NDE1-202ENST00000396355 PYCR1P32322 319 aa7.84□□□□□ -1.15
NDE1-202ENST00000396355 DHPSP49366 369 aaPredicted RBP7.84□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms