RNA–Protein interactions for RNA: ENST00000390497.1

TRAJ40-201, Transcript of T cell receptor alpha joining 40, humanhuman

APPRIS P1 BASIC

Gene TRAJ40, Length 61 nt, Biotype TR J gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAJ40-201ENST00000390497 VDAC1P21796 283 aa2.22□□□□□ -2.05
TRAJ40-201ENST00000390497 PCMT1P22061 227 aa2.22□□□□□ -2.05
TRAJ40-201ENST00000390497 GATA2P23769 480 aaPredicted RBP2.22□□□□□ -2.05
TRAJ40-201ENST00000390497 FASP25445 335 aa2.22□□□□□ -2.05
TRAJ40-201ENST00000390497 HMGB2P26583 209 aaKnown RBP2.22□□□□□ -2.05
TRAJ40-201ENST00000390497 HSD17B2P37059 387 aa2.22□□□□□ -2.05
TRAJ40-201ENST00000390497 DDOSTP39656 456 aa2.22□□□□□ -2.05
TRAJ40-201ENST00000390497 OPRD1P41143 372 aa2.22□□□□□ -2.05
TRAJ40-201ENST00000390497 BTDP43251 543 aa2.22□□□□□ -2.05
TRAJ40-201ENST00000390497 CRYBB2P43320 205 aa2.22□□□□□ -2.05
TRAJ40-201ENST00000390497 ATP1B3P54709 279 aa2.22□□□□□ -2.05
TRAJ40-201ENST00000390497 SEC61GP60059 68 aa2.22□□□□□ -2.05
TRAJ40-201ENST00000390497 BCL2L1Q07817 233 aa2.22□□□□□ -2.05
TRAJ40-201ENST00000390497 BST1Q10588 318 aa2.22□□□□□ -2.05
TRAJ40-201ENST00000390497 CUL1Q13616 776 aa2.22□□□□□ -2.05
TRAJ40-201ENST00000390497 VGLL4Q14135 290 aa2.22□□□□□ -2.05
TRAJ40-201ENST00000390497 GNMTQ14749 295 aa2.22□□□□□ -2.05
TRAJ40-201ENST00000390497 OXA1LQ15070 435 aa2.22□□□□□ -2.05
TRAJ40-201ENST00000390497 PPP1R7Q15435 360 aa2.22□□□□□ -2.05
TRAJ40-201ENST00000390497 DMRTC1Q5HYR2 192 aa2.22□□□□□ -2.05
TRAJ40-201ENST00000390497 OR2A2Q6IF42 318 aa2.22□□□□□ -2.05
TRAJ40-201ENST00000390497 BBS5Q8N3I7 341 aa2.22□□□□□ -2.05
TRAJ40-201ENST00000390497 KLHL30-AS1Q8NEE0 82 aa2.22□□□□□ -2.05
TRAJ40-201ENST00000390497 OR1L4Q8NGR5 311 aa2.22□□□□□ -2.05
TRAJ40-201ENST00000390497 AKR7LQ8NHP1 331 aa2.22□□□□□ -2.05
TRAJ40-201ENST00000390497 RNF139Q8WU17 664 aa2.22□□□□□ -2.05
TRAJ40-201ENST00000390497 DNAJA4Q8WW22 397 aaPredicted RBP2.22□□□□□ -2.05
TRAJ40-201ENST00000390497 NEIL2Q969S2 332 aa2.22□□□□□ -2.05
TRAJ40-201ENST00000390497 FAM122AQ96E09 287 aa2.22□□□□□ -2.05
TRAJ40-201ENST00000390497 B3GALT6Q96L58 329 aa2.22□□□□□ -2.05
TRAJ40-201ENST00000390497 SMIM14Q96QK8 99 aa2.22□□□□□ -2.05
TRAJ40-201ENST00000390497 RANBP9Q96S59 729 aa2.22□□□□□ -2.05
TRAJ40-201ENST00000390497 HIST1H4GQ99525 98 aa2.22□□□□□ -2.05
TRAJ40-201ENST00000390497 PYGO2Q9BRQ0 406 aa2.22□□□□□ -2.05
TRAJ40-201ENST00000390497 Q9H3A6 140 aa2.22□□□□□ -2.05
TRAJ40-201ENST00000390497 FOLH1BQ9HBA9 442 aa2.22□□□□□ -2.05
TRAJ40-201ENST00000390497 VNN3Q9NY84 501 aa2.22□□□□□ -2.05
TRAJ40-201ENST00000390497 ONECUT1Q9UBC0 465 aa2.22□□□□□ -2.05
TRAJ40-201ENST00000390497 NOTCH4Q99466 2003 aa2.22□□□□□ -2.05
TRAJ40-201ENST00000390497 TCF20Q9UGU0 1960 aaKnown RBP2.21□□□□□ -2.05
TRAJ40-201ENST00000390497 IGHV1OR15-1A0A075B7D0 117 aa2.21□□□□□ -2.06
TRAJ40-201ENST00000390497 TCRBV9S1A1TA0A576 114 aa2.21□□□□□ -2.06
TRAJ40-201ENST00000390497 FAM168BA1KXE4 195 aa2.21□□□□□ -2.06
TRAJ40-201ENST00000390497 HEATR9A2RTY3 570 aa2.21□□□□□ -2.06
TRAJ40-201ENST00000390497 GOLGA8OA6NCC3 632 aa2.21□□□□□ -2.06
TRAJ40-201ENST00000390497 GOLGA8NF8WBI6 632 aa2.21□□□□□ -2.06
TRAJ40-201ENST00000390497 SGK1O00141 431 aa2.21□□□□□ -2.06
TRAJ40-201ENST00000390497 ABCD4O14678 606 aa2.21□□□□□ -2.06
TRAJ40-201ENST00000390497 RGS16O15492 202 aaPredicted RBP2.21□□□□□ -2.06
TRAJ40-201ENST00000390497 LGI1O95970 557 aa2.21□□□□□ -2.06
TRAJ40-201ENST00000390497 KLK3P07288 261 aaPredicted RBP2.21□□□□□ -2.06
TRAJ40-201ENST00000390497 OR8U8P0C7N1 319 aa2.21□□□□□ -2.06
TRAJ40-201ENST00000390497 NCK1P16333 377 aa2.21□□□□□ -2.06
TRAJ40-201ENST00000390497 TBPP20226 339 aa2.21□□□□□ -2.06
TRAJ40-201ENST00000390497 PSMB1P20618 241 aaKnown RBP2.21□□□□□ -2.06
TRAJ40-201ENST00000390497 CCNCP24863 283 aa2.21□□□□□ -2.06
TRAJ40-201ENST00000390497 IL2RGP31785 369 aa2.21□□□□□ -2.06
TRAJ40-201ENST00000390497 CASP14P31944 242 aa2.21□□□□□ -2.06
TRAJ40-201ENST00000390497 LEPP41159 167 aa2.21□□□□□ -2.06
TRAJ40-201ENST00000390497 PTGDSP41222 190 aa2.21□□□□□ -2.06
TRAJ40-201ENST00000390497 KIR2DS4P43632 304 aa2.21□□□□□ -2.06
TRAJ40-201ENST00000390497 SUCLG1P53597 346 aaKnown RBP2.21□□□□□ -2.06
TRAJ40-201ENST00000390497 RIPK4P57078 832 aa2.21□□□□□ -2.06
TRAJ40-201ENST00000390497 LMO4P61968 165 aa2.21□□□□□ -2.06
TRAJ40-201ENST00000390497 BST2Q10589 180 aaKnown RBP2.21□□□□□ -2.06
TRAJ40-201ENST00000390497 MRPL28Q13084 256 aaKnown RBP2.21□□□□□ -2.06
TRAJ40-201ENST00000390497 RCN1Q15293 331 aa2.21□□□□□ -2.06
TRAJ40-201ENST00000390497 MICBQ29980 383 aa2.21□□□□□ -2.06
TRAJ40-201ENST00000390497 PARP15Q460N3 678 aa2.21□□□□□ -2.06
TRAJ40-201ENST00000390497 TCTEX1D4Q5JR98 221 aa2.21□□□□□ -2.06
TRAJ40-201ENST00000390497 KLF17Q5JT82 389 aaPredicted RBP2.21□□□□□ -2.06
TRAJ40-201ENST00000390497 EOGTQ5NDL2 527 aa2.21□□□□□ -2.06
TRAJ40-201ENST00000390497 SAMD4BQ5PRF9 694 aaKnown RBP2.21□□□□□ -2.06
TRAJ40-201ENST00000390497 CXCL17Q6UXB2 119 aa2.21□□□□□ -2.06
TRAJ40-201ENST00000390497 LRRC74BQ6ZQY2 392 aa2.21□□□□□ -2.06
TRAJ40-201ENST00000390497 Q6ZR54 194 aa2.21□□□□□ -2.06
TRAJ40-201ENST00000390497 DHDDSQ86SQ9 333 aa2.21□□□□□ -2.06
TRAJ40-201ENST00000390497 P2RY8Q86VZ1 359 aa2.21□□□□□ -2.06
TRAJ40-201ENST00000390497 EGFL6Q8IUX8 553 aa2.21□□□□□ -2.06
TRAJ40-201ENST00000390497 NUDCD3Q8IVD9 361 aa2.21□□□□□ -2.06
TRAJ40-201ENST00000390497 SKA3Q8IX90 412 aa2.21□□□□□ -2.06
TRAJ40-201ENST00000390497 GPR65Q8IYL9 337 aa2.21□□□□□ -2.06
TRAJ40-201ENST00000390497 FTMTQ8N4E7 242 aa2.21□□□□□ -2.06
TRAJ40-201ENST00000390497 CATSPER1Q8NEC5 780 aa2.21□□□□□ -2.06
TRAJ40-201ENST00000390497 OR4C5Q8NGB2 326 aa2.21□□□□□ -2.06
TRAJ40-201ENST00000390497 OR2AP1Q8NGE2 309 aa2.21□□□□□ -2.06
TRAJ40-201ENST00000390497 OR52H1Q8NGJ2 320 aa2.21□□□□□ -2.06
TRAJ40-201ENST00000390497 OR56B4Q8NH76 319 aa2.21□□□□□ -2.06
TRAJ40-201ENST00000390497 TYMSOSQ8TAI1 123 aa2.21□□□□□ -2.06
TRAJ40-201ENST00000390497 PAQR8Q8TEZ7 354 aa2.21□□□□□ -2.06
TRAJ40-201ENST00000390497 GTSF1Q8WW33 167 aa2.21□□□□□ -2.06
TRAJ40-201ENST00000390497 RAPGEF5Q92565 580 aa2.21□□□□□ -2.06
TRAJ40-201ENST00000390497 UFD1Q92890 307 aa2.21□□□□□ -2.06
TRAJ40-201ENST00000390497 SLC25A38Q96DW6 304 aa2.21□□□□□ -2.06
TRAJ40-201ENST00000390497 TM4SF19Q96DZ7 209 aa2.21□□□□□ -2.06
TRAJ40-201ENST00000390497 PAGE5Q96GU1 130 aa2.21□□□□□ -2.06
TRAJ40-201ENST00000390497 TIMD4Q96H15 378 aa2.21□□□□□ -2.06
TRAJ40-201ENST00000390497 VSIG2Q96IQ7 327 aa2.21□□□□□ -2.06
TRAJ40-201ENST00000390497 PGLYRP4Q96LB8 373 aa2.21□□□□□ -2.06
TRAJ40-201ENST00000390497 CNN2Q99439 309 aaKnown RBP2.21□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms