RNA–Protein interactions for RNA: ENST00000374943.8

HLA-DQB1-201, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

BASIC

Gene HLA-DQB1, Length 1,656 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-201ENST00000374943 PAPD4Q6PIY7 484 aaKnown RBP16.43■□□□□ 0.22
HLA-DQB1-201ENST00000374943 DBX2Q6ZNG2 339 aa16.43■□□□□ 0.22
HLA-DQB1-201ENST00000374943 CPEB2Q7Z5Q1 589 aaKnown RBP16.43■□□□□ 0.22
HLA-DQB1-201ENST00000374943 MARCH3Q86UD3 253 aa16.43■□□□□ 0.22
HLA-DQB1-201ENST00000374943 KLHL36Q8N4N3 616 aa16.43■□□□□ 0.22
HLA-DQB1-201ENST00000374943 OR5W2Q8NH69 310 aa16.43■□□□□ 0.22
HLA-DQB1-201ENST00000374943 TM9SF4Q92544 642 aa16.43■□□□□ 0.22
HLA-DQB1-201ENST00000374943 RNF167Q9H6Y7 350 aa16.43■□□□□ 0.22
HLA-DQB1-201ENST00000374943 MED20Q9H944 212 aa16.43■□□□□ 0.22
HLA-DQB1-201ENST00000374943 SIAEQ9HAT2 523 aa16.43■□□□□ 0.22
HLA-DQB1-201ENST00000374943 HMG20AQ9NP66 347 aa16.43■□□□□ 0.22
HLA-DQB1-201ENST00000374943 INPP5EQ9NRR6 644 aa16.43■□□□□ 0.22
HLA-DQB1-201ENST00000374943 HAO2Q9NYQ3 351 aa16.43■□□□□ 0.22
HLA-DQB1-201ENST00000374943 C19orf25Q9UFG5 118 aaPredicted RBP16.43■□□□□ 0.22
HLA-DQB1-201ENST00000374943 NXT1Q9UKK6 140 aaKnown RBP16.43■□□□□ 0.22
HLA-DQB1-201ENST00000374943 AGRPO00253 132 aa16.42■□□□□ 0.22
HLA-DQB1-201ENST00000374943 HCRTR2O43614 444 aa16.42■□□□□ 0.22
HLA-DQB1-201ENST00000374943 IDH3BO43837 385 aa16.42■□□□□ 0.22
HLA-DQB1-201ENST00000374943 CDC40O60508 579 aaKnown RBP eCLIP16.42■□□□□ 0.22
HLA-DQB1-201ENST00000374943 ACP1P24666 158 aa16.42■□□□□ 0.22
HLA-DQB1-201ENST00000374943 MC2RQ01718 297 aa16.42■□□□□ 0.22
HLA-DQB1-201ENST00000374943 CRMP1Q14194 572 aa16.42■□□□□ 0.22
HLA-DQB1-201ENST00000374943 ZNF404Q494X3 552 aa16.42■□□□□ 0.22
HLA-DQB1-201ENST00000374943 LIPKQ5VXJ0 399 aa16.42■□□□□ 0.22
HLA-DQB1-201ENST00000374943 MISPQ8IVT2 679 aa16.42■□□□□ 0.22
HLA-DQB1-201ENST00000374943 LRRC17Q8N6Y2 441 aa16.42■□□□□ 0.22
HLA-DQB1-201ENST00000374943 OR5M3Q8NGP4 307 aa16.42■□□□□ 0.22
HLA-DQB1-201ENST00000374943 MCFD2Q8NI22 146 aa16.42■□□□□ 0.22
HLA-DQB1-201ENST00000374943 ZNF563Q8TA94 476 aa16.42■□□□□ 0.22
HLA-DQB1-201ENST00000374943 OTULINQ96BN8 352 aa16.42■□□□□ 0.22
HLA-DQB1-201ENST00000374943 LOXL4Q96JB6 756 aa16.42■□□□□ 0.22
HLA-DQB1-201ENST00000374943 ERMAPQ96PL5 475 aaPredicted RBP16.42■□□□□ 0.22
HLA-DQB1-201ENST00000374943 SECISBP2Q96T21 854 aaKnown RBP16.42■□□□□ 0.22
HLA-DQB1-201ENST00000374943 LPAR4Q99677 370 aa16.42■□□□□ 0.22
HLA-DQB1-201ENST00000374943 CRB3Q9BUF7 120 aa16.42■□□□□ 0.22
HLA-DQB1-201ENST00000374943 NRIP3Q9NQ35 241 aa16.42■□□□□ 0.22
HLA-DQB1-201ENST00000374943 RXFP3Q9NSD7 469 aa16.42■□□□□ 0.22
HLA-DQB1-201ENST00000374943 HIF3AQ9Y2N7 669 aa16.42■□□□□ 0.22
HLA-DQB1-201ENST00000374943 NPFFR2Q9Y5X5 522 aa16.42■□□□□ 0.22
HLA-DQB1-201ENST00000374943 SPIN1Q9Y657 262 aaPredicted RBP16.42■□□□□ 0.22
HLA-DQB1-201ENST00000374943 RALGAPA1Q6GYQ0 2036 aa16.42■□□□□ 0.22
HLA-DQB1-201ENST00000374943 MYO15AQ9UKN7 3530 aa16.41■□□□□ 0.22
HLA-DQB1-201ENST00000374943 MCIDASD6RGH6 385 aa16.41■□□□□ 0.22
HLA-DQB1-201ENST00000374943 ADAM10O14672 748 aa16.41■□□□□ 0.22
HLA-DQB1-201ENST00000374943 TSPAN19P0C672 248 aa16.41■□□□□ 0.22
HLA-DQB1-201ENST00000374943 PGCP20142 388 aa16.41■□□□□ 0.22
HLA-DQB1-201ENST00000374943 NOS3P29474 1203 aa16.41■□□□□ 0.22
HLA-DQB1-201ENST00000374943 ATP6V1E1P36543 226 aa16.41■□□□□ 0.22
HLA-DQB1-201ENST00000374943 MPLP40238 635 aa16.41■□□□□ 0.22
HLA-DQB1-201ENST00000374943 RPS3AP61247 264 aaKnown RBP16.41■□□□□ 0.22
HLA-DQB1-201ENST00000374943 EGR4Q05215 589 aa16.41■□□□□ 0.22
HLA-DQB1-201ENST00000374943 LCN10Q6JVE6 187 aa16.41■□□□□ 0.22
HLA-DQB1-201ENST00000374943 PRR23CQ6ZRP0 262 aa16.41■□□□□ 0.22
HLA-DQB1-201ENST00000374943 LHFPL3Q86UP9 236 aa16.41■□□□□ 0.22
HLA-DQB1-201ENST00000374943 OR51G2Q8NGK0 314 aa16.41■□□□□ 0.22
HLA-DQB1-201ENST00000374943 UFD1Q92890 307 aa16.41■□□□□ 0.22
HLA-DQB1-201ENST00000374943 ZNF524Q96C55 264 aa16.41■□□□□ 0.22
HLA-DQB1-201ENST00000374943 TEAD3Q99594 435 aa16.41■□□□□ 0.22
HLA-DQB1-201ENST00000374943 CTRCQ99895 268 aa16.41■□□□□ 0.22
HLA-DQB1-201ENST00000374943 OCEL1Q9H607 264 aa16.41■□□□□ 0.22
HLA-DQB1-201ENST00000374943 MMP25Q9NPA2 562 aa16.41■□□□□ 0.22
HLA-DQB1-201ENST00000374943 B3GNT3Q9Y2A9 372 aa16.41■□□□□ 0.22
HLA-DQB1-201ENST00000374943 CAB39Q9Y376 341 aaPredicted RBP16.41■□□□□ 0.22
HLA-DQB1-201ENST00000374943 KIF26BQ2KJY2 2108 aa16.41■□□□□ 0.22
HLA-DQB1-201ENST00000374943 LOC105378220A0A1B0GUY1 285 aaPredicted RBP16.4■□□□□ 0.22
HLA-DQB1-201ENST00000374943 LRRN3E7EW58 273 aa16.4■□□□□ 0.22
HLA-DQB1-201ENST00000374943 LDOC1O95751 146 aaPredicted RBP16.4■□□□□ 0.22
HLA-DQB1-201ENST00000374943 NAGAP17050 411 aa16.4■□□□□ 0.22
HLA-DQB1-201ENST00000374943 TACR3P29371 465 aa16.4■□□□□ 0.22
HLA-DQB1-201ENST00000374943 P2RX1P51575 399 aa16.4■□□□□ 0.22
HLA-DQB1-201ENST00000374943 SLC26A5P58743 744 aa16.4■□□□□ 0.22
HLA-DQB1-201ENST00000374943 CBFBQ13951 182 aa16.4■□□□□ 0.22
HLA-DQB1-201ENST00000374943 MFSD4AQ8N468 514 aa16.4■□□□□ 0.22
HLA-DQB1-201ENST00000374943 ACBD7Q8N6N7 88 aa16.4■□□□□ 0.22
HLA-DQB1-201ENST00000374943 GATAD2BQ8WXI9 593 aa16.4■□□□□ 0.22
HLA-DQB1-201ENST00000374943 NACC2Q96BF6 587 aa16.4■□□□□ 0.22
HLA-DQB1-201ENST00000374943 KLHDC3Q9BQ90 382 aa16.4■□□□□ 0.22
HLA-DQB1-201ENST00000374943 MESP1Q9BRJ9 268 aa16.4■□□□□ 0.22
HLA-DQB1-201ENST00000374943 CDADC1Q9BWV3 514 aa16.4■□□□□ 0.22
HLA-DQB1-201ENST00000374943 SSR3Q9UNL2 185 aa16.4■□□□□ 0.22
HLA-DQB1-201ENST00000374943 SLC6A5Q9Y345 797 aa16.4■□□□□ 0.22
HLA-DQB1-201ENST00000374943 SF3B6Q9Y3B4 125 aaKnown RBP16.4■□□□□ 0.22
HLA-DQB1-201ENST00000374943 PCDHGB6Q9Y5F9 930 aa16.4■□□□□ 0.22
HLA-DQB1-201ENST00000374943 PCDHGA5Q9Y5G8 931 aa16.4■□□□□ 0.22
HLA-DQB1-201ENST00000374943 CORINQ9Y5Q5 1042 aa16.4■□□□□ 0.22
HLA-DQB1-201ENST00000374943 ZNF670-ZNF695F2Z2N8 137 aa16.4■□□□□ 0.22
HLA-DQB1-201ENST00000374943 AKAP8O43823 692 aaKnown RBP16.4■□□□□ 0.22
HLA-DQB1-201ENST00000374943 ASAH2BP0C7U1 165 aa16.4■□□□□ 0.22
HLA-DQB1-201ENST00000374943 APEHP13798 732 aaKnown RBP16.4■□□□□ 0.22
HLA-DQB1-201ENST00000374943 IDUAP35475 653 aa16.4■□□□□ 0.22
HLA-DQB1-201ENST00000374943 CD79BP40259 229 aa16.4■□□□□ 0.22
HLA-DQB1-201ENST00000374943 BDH1Q02338 343 aa16.4■□□□□ 0.22
HLA-DQB1-201ENST00000374943 POU4F2Q12837 409 aa16.4■□□□□ 0.22
HLA-DQB1-201ENST00000374943 LPAL2Q16609 132 aa16.4■□□□□ 0.22
HLA-DQB1-201ENST00000374943 KLHL12Q53G59 568 aa16.4■□□□□ 0.22
HLA-DQB1-201ENST00000374943 FCRLBQ6BAA4 426 aa16.4■□□□□ 0.22
HLA-DQB1-201ENST00000374943 ZNF322Q6U7Q0 402 aaPredicted RBP16.4■□□□□ 0.22
HLA-DQB1-201ENST00000374943 OR5L2Q8NGL0 311 aa16.4■□□□□ 0.22
HLA-DQB1-201ENST00000374943 RNF138Q8WVD3 245 aa16.4■□□□□ 0.22
HLA-DQB1-201ENST00000374943 IER3IP1Q9Y5U9 82 aa16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms