RNA–Protein interactions for RNA: ENST00000372190.7

RAPGEF1-202, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene RAPGEF1, Length 6,045 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-202ENST00000372190 RNF13O43567 381 aa13.17□□□□□ -0.3
RAPGEF1-202ENST00000372190 HOXC13P31276 330 aa13.17□□□□□ -0.3
RAPGEF1-202ENST00000372190 FASLGP48023 281 aa13.17□□□□□ -0.3
RAPGEF1-202ENST00000372190 FXYD4P59646 89 aa13.17□□□□□ -0.3
RAPGEF1-202ENST00000372190 CHRNEQ04844 493 aa13.17□□□□□ -0.3
RAPGEF1-202ENST00000372190 METAP1DQ6UB28 335 aaPredicted RBP13.17□□□□□ -0.3
RAPGEF1-202ENST00000372190 KDELC1Q6UW63 502 aa13.17□□□□□ -0.3
RAPGEF1-202ENST00000372190 NXPE4Q6UWF7 544 aa13.17□□□□□ -0.3
RAPGEF1-202ENST00000372190 OR6N1Q8NGY5 312 aa13.17□□□□□ -0.3
RAPGEF1-202ENST00000372190 THAP3Q8WTV1 239 aaPredicted RBP13.17□□□□□ -0.3
RAPGEF1-202ENST00000372190 DAZLQ92904 295 aaKnown RBP13.17□□□□□ -0.3
RAPGEF1-202ENST00000372190 POLDIP3Q9BY77 421 aaKnown RBP13.17□□□□□ -0.3
RAPGEF1-202ENST00000372190 SLC39A9Q9NUM3 307 aa13.17□□□□□ -0.3
RAPGEF1-202ENST00000372190 MARCH5Q9NX47 278 aa13.17□□□□□ -0.3
RAPGEF1-202ENST00000372190 ZNF17P17021 662 aa13.17□□□□□ -0.3
RAPGEF1-202ENST00000372190 ARL16Q0P5N6 197 aa13.17□□□□□ -0.3
RAPGEF1-202ENST00000372190 NPRL3Q12980 569 aa13.17□□□□□ -0.3
RAPGEF1-202ENST00000372190 SMAD4Q13485 552 aaKnown RBP13.17□□□□□ -0.3
RAPGEF1-202ENST00000372190 TOMM40LQ969M1 308 aa13.17□□□□□ -0.3
RAPGEF1-202ENST00000372190 IL17FQ96PD4 163 aa13.17□□□□□ -0.3
RAPGEF1-202ENST00000372190 CWH43Q9H720 699 aa13.17□□□□□ -0.3
RAPGEF1-202ENST00000372190 WIF1Q9Y5W5 379 aa13.17□□□□□ -0.3
RAPGEF1-202ENST00000372190 CTRB1P17538 263 aa13.17□□□□□ -0.3
RAPGEF1-202ENST00000372190 GRM7Q14831 915 aa13.17□□□□□ -0.3
RAPGEF1-202ENST00000372190 CTRB2Q6GPI1 263 aa13.17□□□□□ -0.3
RAPGEF1-202ENST00000372190 OR52W1Q6IF63 320 aa13.17□□□□□ -0.3
RAPGEF1-202ENST00000372190 EID2Q8N6I1 236 aa13.17□□□□□ -0.3
RAPGEF1-202ENST00000372190 MEGF11A6BM72 1044 aa13.17□□□□□ -0.3
RAPGEF1-202ENST00000372190 GLOD5A6NK44 160 aa13.17□□□□□ -0.3
RAPGEF1-202ENST00000372190 F6UZH7 168 aa13.17□□□□□ -0.3
RAPGEF1-202ENST00000372190 EDN1P05305 212 aa13.17□□□□□ -0.3
RAPGEF1-202ENST00000372190 C1GALT1C1LP0DN25 315 aa13.17□□□□□ -0.3
RAPGEF1-202ENST00000372190 PSMB3P49720 205 aa13.17□□□□□ -0.3
RAPGEF1-202ENST00000372190 SF3B4Q15427 424 aaKnown RBP eCLIP13.17□□□□□ -0.3
RAPGEF1-202ENST00000372190 MINDY1Q8N5J2 469 aa13.17□□□□□ -0.3
RAPGEF1-202ENST00000372190 IL17RDQ8NFM7 739 aa13.17□□□□□ -0.3
RAPGEF1-202ENST00000372190 GAB3Q8WWW8 586 aa13.17□□□□□ -0.3
RAPGEF1-202ENST00000372190 PBX4Q9BYU1 374 aa13.17□□□□□ -0.3
RAPGEF1-202ENST00000372190 ZBTB20Q9HC78 741 aaPredicted RBP13.17□□□□□ -0.3
RAPGEF1-202ENST00000372190 ADAM29Q9UKF5 820 aa13.17□□□□□ -0.3
RAPGEF1-202ENST00000372190 METTL15A6NJ78 407 aa13.16□□□□□ -0.3
RAPGEF1-202ENST00000372190 FABP7O15540 132 aa13.16□□□□□ -0.3
RAPGEF1-202ENST00000372190 CDK5Q00535 292 aa13.16□□□□□ -0.3
RAPGEF1-202ENST00000372190 AWAT2Q6E213 333 aa13.16□□□□□ -0.3
RAPGEF1-202ENST00000372190 PARP16Q8N5Y8 322 aa13.16□□□□□ -0.3
RAPGEF1-202ENST00000372190 FAM46AQ96IP4 442 aaKnown RBP13.16□□□□□ -0.3
RAPGEF1-202ENST00000372190 SOX17Q9H6I2 414 aaPredicted RBP13.16□□□□□ -0.3
RAPGEF1-202ENST00000372190 ASB6Q9NWX5 421 aa13.16□□□□□ -0.3
RAPGEF1-202ENST00000372190 KLHL21Q9UJP4 597 aa13.16□□□□□ -0.3
RAPGEF1-202ENST00000372190 LRIT2A6NDA9 550 aa13.16□□□□□ -0.3
RAPGEF1-202ENST00000372190 TTRP02766 147 aa13.16□□□□□ -0.3
RAPGEF1-202ENST00000372190 MT-ND4P03905 459 aa13.16□□□□□ -0.3
RAPGEF1-202ENST00000372190 SLC2A1P11166 492 aa13.16□□□□□ -0.3
RAPGEF1-202ENST00000372190 MTNR1AP48039 350 aa13.16□□□□□ -0.3
RAPGEF1-202ENST00000372190 POU6F2P78424 691 aaPredicted RBP13.16□□□□□ -0.3
RAPGEF1-202ENST00000372190 PIN1Q13526 163 aaPredicted RBP13.16□□□□□ -0.3
RAPGEF1-202ENST00000372190 BLOC1S3Q6QNY0 202 aa13.16□□□□□ -0.3
RAPGEF1-202ENST00000372190 LIX1LQ8IVB5 337 aa13.16□□□□□ -0.3
RAPGEF1-202ENST00000372190 ZFAND1Q8TCF1 268 aa13.16□□□□□ -0.3
RAPGEF1-202ENST00000372190 OARD1Q9Y530 152 aa13.16□□□□□ -0.3
RAPGEF1-202ENST00000372190 CEPT1Q9Y6K0 416 aa13.16□□□□□ -0.3
RAPGEF1-202ENST00000372190 DNMT3AQ9Y6K1 912 aaPredicted RBP13.16□□□□□ -0.3
RAPGEF1-202ENST00000372190 PHIPQ8WWQ0 1821 aa13.16□□□□□ -0.3
RAPGEF1-202ENST00000372190 LOC285095A0A1B0GVY8 99 aa13.16□□□□□ -0.3
RAPGEF1-202ENST00000372190 OR5H15A6NDH6 313 aa13.16□□□□□ -0.3
RAPGEF1-202ENST00000372190 OR5H14A6NHG9 310 aa13.16□□□□□ -0.3
RAPGEF1-202ENST00000372190 OR5H1A6NKK0 313 aa13.16□□□□□ -0.3
RAPGEF1-202ENST00000372190 BCKDHBP21953 392 aa13.16□□□□□ -0.3
RAPGEF1-202ENST00000372190 HTR1EP28566 365 aa13.16□□□□□ -0.3
RAPGEF1-202ENST00000372190 IRS1P35568 1242 aa13.16□□□□□ -0.3
RAPGEF1-202ENST00000372190 RIDAP52758 137 aaKnown RBP13.16□□□□□ -0.3
RAPGEF1-202ENST00000372190 TBPL1P62380 186 aa13.16□□□□□ -0.3
RAPGEF1-202ENST00000372190 MOGAT2Q3SYC2 334 aa13.16□□□□□ -0.3
RAPGEF1-202ENST00000372190 CARD17Q5XLA6 110 aa13.16□□□□□ -0.3
RAPGEF1-202ENST00000372190 OR51Q1Q8NH59 317 aa13.16□□□□□ -0.3
RAPGEF1-202ENST00000372190 EDAQ92838 391 aa13.16□□□□□ -0.3
RAPGEF1-202ENST00000372190 SEC22CQ9BRL7 303 aa13.16□□□□□ -0.3
RAPGEF1-202ENST00000372190 FBXL2Q9UKC9 423 aa13.16□□□□□ -0.3
RAPGEF1-202ENST00000372190 UNC119BA6NIH7 251 aa13.16□□□□□ -0.3
RAPGEF1-202ENST00000372190 GJE1A6NN92 205 aa13.16□□□□□ -0.3
RAPGEF1-202ENST00000372190 SDHDO14521 159 aa13.16□□□□□ -0.3
RAPGEF1-202ENST00000372190 SIX6O95475 246 aa13.16□□□□□ -0.3
RAPGEF1-202ENST00000372190 RNH1P13489 461 aaKnown RBP13.16□□□□□ -0.3
RAPGEF1-202ENST00000372190 GGT5P36269 586 aa13.16□□□□□ -0.3
RAPGEF1-202ENST00000372190 FOLR3P41439 243 aa13.16□□□□□ -0.3
RAPGEF1-202ENST00000372190 LIPJQ5W064 366 aa13.16□□□□□ -0.3
RAPGEF1-202ENST00000372190 MEX3BQ6ZN04 569 aaKnown RBP13.16□□□□□ -0.3
RAPGEF1-202ENST00000372190 RNF111Q6ZNA4 994 aa13.16□□□□□ -0.3
RAPGEF1-202ENST00000372190 C17orf107Q6ZR85 190 aa13.16□□□□□ -0.3
RAPGEF1-202ENST00000372190 DNAJC5GQ8N7S2 189 aa13.16□□□□□ -0.3
RAPGEF1-202ENST00000372190 CA5BP1Q8WTZ4 195 aa13.16□□□□□ -0.3
RAPGEF1-202ENST00000372190 SGCZQ96LD1 299 aa13.16□□□□□ -0.3
RAPGEF1-202ENST00000372190 CNN2Q99439 309 aaKnown RBP13.16□□□□□ -0.3
RAPGEF1-202ENST00000372190 NICN1Q9BSH3 213 aa13.16□□□□□ -0.3
RAPGEF1-202ENST00000372190 C1orf198Q9H425 327 aa13.16□□□□□ -0.3
RAPGEF1-202ENST00000372190 RDH14Q9HBH5 336 aa13.16□□□□□ -0.3
RAPGEF1-202ENST00000372190 MED16Q9Y2X0 877 aa13.16□□□□□ -0.3
RAPGEF1-202ENST00000372190 SLC22A20A6NK97 555 aa13.16□□□□□ -0.3
RAPGEF1-202ENST00000372190 D6RAR5 112 aa13.16□□□□□ -0.3
RAPGEF1-202ENST00000372190 C6orf47O95873 294 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms