RNA–Protein interactions for RNA: ENST00000370496.3

COL9A1-204, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL9A1, Length 1,372 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-204ENST00000370496 AQP8O94778 261 aa13.29□□□□□ -0.28
COL9A1-204ENST00000370496 UBOX5O94941 541 aa13.29□□□□□ -0.28
COL9A1-204ENST00000370496 RCBTB2O95199 551 aa13.29□□□□□ -0.28
COL9A1-204ENST00000370496 SERPINA1P01009 418 aa13.29□□□□□ -0.28
COL9A1-204ENST00000370496 HSD17B1P14061 328 aa13.29□□□□□ -0.28
COL9A1-204ENST00000370496 GGT1P19440 569 aa13.29□□□□□ -0.28
COL9A1-204ENST00000370496 CTSSP25774 331 aa13.29□□□□□ -0.28
COL9A1-204ENST00000370496 OPRM1P35372 400 aa13.29□□□□□ -0.28
COL9A1-204ENST00000370496 CLK1P49759 484 aaKnown RBP13.29□□□□□ -0.28
COL9A1-204ENST00000370496 BNIP2Q12982 314 aa13.29□□□□□ -0.28
COL9A1-204ENST00000370496 CDSNQ15517 529 aa13.29□□□□□ -0.28
COL9A1-204ENST00000370496 OR1Q1Q15612 314 aa13.29□□□□□ -0.28
COL9A1-204ENST00000370496 SLC25A35Q3KQZ1 300 aa13.29□□□□□ -0.28
COL9A1-204ENST00000370496 ULK3Q6PHR2 472 aa13.29□□□□□ -0.28
COL9A1-204ENST00000370496 DEF8Q6ZN54 512 aa13.29□□□□□ -0.28
COL9A1-204ENST00000370496 TMPPEQ6ZT21 453 aa13.29□□□□□ -0.28
COL9A1-204ENST00000370496 ATG4DQ86TL0 474 aaPredicted RBP13.29□□□□□ -0.28
COL9A1-204ENST00000370496 LSRQ86X29 649 aaPredicted RBP13.29□□□□□ -0.28
COL9A1-204ENST00000370496 ARL5BQ96KC2 179 aa13.29□□□□□ -0.28
COL9A1-204ENST00000370496 CDRT15Q96T59 188 aa13.29□□□□□ -0.28
COL9A1-204ENST00000370496 WFDC6Q9BQY6 131 aa13.29□□□□□ -0.28
COL9A1-204ENST00000370496 PRR14Q9BWN1 585 aa13.29□□□□□ -0.28
COL9A1-204ENST00000370496 MAGEL2Q9UJ55 1249 aa13.29□□□□□ -0.28
COL9A1-204ENST00000370496 SPTAN1Q13813 2472 aaKnown RBP13.28□□□□□ -0.28
COL9A1-204ENST00000370496 IGHV3-15A0A0B4J1V0 119 aa13.28□□□□□ -0.28
COL9A1-204ENST00000370496 A0A0B4J2E0 115 aa13.28□□□□□ -0.28
COL9A1-204ENST00000370496 A0A1B0GX12 115 aa13.28□□□□□ -0.28
COL9A1-204ENST00000370496 ZC3H12DA2A288 527 aaKnown RBP13.28□□□□□ -0.28
COL9A1-204ENST00000370496 NKX2-6A6NCS4 301 aa13.28□□□□□ -0.28
COL9A1-204ENST00000370496 A8MVM7 634 aa13.28□□□□□ -0.28
COL9A1-204ENST00000370496 TMEM229AB2RXF0 380 aa13.28□□□□□ -0.28
COL9A1-204ENST00000370496 PMS2P2O95744 297 aa13.28□□□□□ -0.28
COL9A1-204ENST00000370496 CLDN1O95832 211 aa13.28□□□□□ -0.28
COL9A1-204ENST00000370496 PNMTP11086 282 aa13.28□□□□□ -0.28
COL9A1-204ENST00000370496 ENPP1P22413 925 aa13.28□□□□□ -0.28
COL9A1-204ENST00000370496 HTR1EP28566 365 aa13.28□□□□□ -0.28
COL9A1-204ENST00000370496 IDUAP35475 653 aa13.28□□□□□ -0.28
COL9A1-204ENST00000370496 CPOXP36551 454 aa13.28□□□□□ -0.28
COL9A1-204ENST00000370496 AGFG1P52594 562 aaKnown RBP13.28□□□□□ -0.28
COL9A1-204ENST00000370496 OR2B6P58173 313 aa13.28□□□□□ -0.28
COL9A1-204ENST00000370496 RAC3P60763 192 aa13.28□□□□□ -0.28
COL9A1-204ENST00000370496 SIRPAP78324 504 aa13.28□□□□□ -0.28
COL9A1-204ENST00000370496 FOXF2Q12947 444 aa13.28□□□□□ -0.28
COL9A1-204ENST00000370496 NPTX1Q15818 432 aa13.28□□□□□ -0.28
COL9A1-204ENST00000370496 ENTPD8Q5MY95 495 aa13.28□□□□□ -0.28
COL9A1-204ENST00000370496 SWT1Q5T5J6 900 aaKnown RBP13.28□□□□□ -0.28
COL9A1-204ENST00000370496 ZNF613Q6PF04 617 aa13.28□□□□□ -0.28
COL9A1-204ENST00000370496 C6orf89Q6UWU4 347 aa13.28□□□□□ -0.28
COL9A1-204ENST00000370496 RINLQ6ZS11 566 aa13.28□□□□□ -0.28
COL9A1-204ENST00000370496 FCRLAQ7L513 359 aa13.28□□□□□ -0.28
COL9A1-204ENST00000370496 RBM45Q8IUH3 476 aaKnown RBP13.28□□□□□ -0.28
COL9A1-204ENST00000370496 OR4D11Q8NGI4 311 aa13.28□□□□□ -0.28
COL9A1-204ENST00000370496 LILRB4Q8NHJ6 448 aa13.28□□□□□ -0.28
COL9A1-204ENST00000370496 RNF128Q8TEB7 428 aa13.28□□□□□ -0.28
COL9A1-204ENST00000370496 ROBO4Q8WZ75 1007 aa13.28□□□□□ -0.28
COL9A1-204ENST00000370496 SLC47A1Q96FL8 570 aa13.28□□□□□ -0.28
COL9A1-204ENST00000370496 PSMG3-AS1Q96PY0 264 aa13.28□□□□□ -0.28
COL9A1-204ENST00000370496 C12orf10Q9HB07 376 aa13.28□□□□□ -0.28
COL9A1-204ENST00000370496 KCNJ16Q9NPI9 418 aa13.28□□□□□ -0.28
COL9A1-204ENST00000370496 ZNF629Q9UEG4 869 aaPredicted RBP13.28□□□□□ -0.28
COL9A1-204ENST00000370496 PLEKHB1Q9UF11 243 aaPredicted RBP13.28□□□□□ -0.28
COL9A1-204ENST00000370496 RPS6KA6Q9UK32 745 aa13.28□□□□□ -0.28
COL9A1-204ENST00000370496 KLF2Q9Y5W3 355 aaPredicted RBP13.28□□□□□ -0.28
COL9A1-204ENST00000370496 MPDZO75970 2070 aa13.28□□□□□ -0.28
COL9A1-204ENST00000370496 COL12A1Q99715 3063 aa13.27□□□□□ -0.28
COL9A1-204ENST00000370496 A0A1W2PNV4 684 aa13.27□□□□□ -0.29
COL9A1-204ENST00000370496 DNPH1O43598 174 aa13.27□□□□□ -0.29
COL9A1-204ENST00000370496 TPST2O60704 377 aa13.27□□□□□ -0.29
COL9A1-204ENST00000370496 AHSA1O95433 338 aa13.27□□□□□ -0.29
COL9A1-204ENST00000370496 IL18BPO95998 194 aa13.27□□□□□ -0.29
COL9A1-204ENST00000370496 CRHP06850 196 aa13.27□□□□□ -0.29
COL9A1-204ENST00000370496 T-ENOLP0DO92 83 aa13.27□□□□□ -0.29
COL9A1-204ENST00000370496 OR1E2P47887 323 aa13.27□□□□□ -0.29
COL9A1-204ENST00000370496 CTBP2P56545 445 aa13.27□□□□□ -0.29
COL9A1-204ENST00000370496 SELENOWP63302 87 aa13.27□□□□□ -0.29
COL9A1-204ENST00000370496 RNPS1Q15287 305 aaKnown RBP13.27□□□□□ -0.29
COL9A1-204ENST00000370496 SPATS1Q496A3 300 aa13.27□□□□□ -0.29
COL9A1-204ENST00000370496 C1orf140Q5VVS0 124 aa13.27□□□□□ -0.29
COL9A1-204ENST00000370496 LIX1LQ8IVB5 337 aa13.27□□□□□ -0.29
COL9A1-204ENST00000370496 RELL2Q8NC24 303 aaPredicted RBP13.27□□□□□ -0.29
COL9A1-204ENST00000370496 ADAMTS16Q8TE57 1224 aa13.27□□□□□ -0.29
COL9A1-204ENST00000370496 ABHD3Q8WU67 409 aa13.27□□□□□ -0.29
COL9A1-204ENST00000370496 GEMIN6Q8WXD5 167 aaKnown RBP13.27□□□□□ -0.29
COL9A1-204ENST00000370496 GMPPAQ96IJ6 420 aaPredicted RBP13.27□□□□□ -0.29
COL9A1-204ENST00000370496 HSH2DQ96JZ2 352 aa13.27□□□□□ -0.29
COL9A1-204ENST00000370496 TAPBPLQ9BX59 468 aa13.27□□□□□ -0.29
COL9A1-204ENST00000370496 UCK2Q9BZX2 261 aa13.27□□□□□ -0.29
COL9A1-204ENST00000370496 CLEC4AQ9UMR7 237 aa13.27□□□□□ -0.29
COL9A1-204ENST00000370496 EMC9Q9Y3B6 208 aa13.27□□□□□ -0.29
COL9A1-204ENST00000370496 SNX13Q9Y5W8 968 aa13.27□□□□□ -0.29
COL9A1-204ENST00000370496 SPTBN1Q01082 2364 aaKnown RBP13.27□□□□□ -0.29
COL9A1-204ENST00000370496 PTPN13Q12923 2485 aa13.27□□□□□ -0.29
COL9A1-204ENST00000370496 INTS1Q8N201 2190 aaKnown RBP13.26□□□□□ -0.29
COL9A1-204ENST00000370496 SMAD9O15198 467 aaKnown RBP13.26□□□□□ -0.29
COL9A1-204ENST00000370496 CHP2O43745 196 aa13.26□□□□□ -0.29
COL9A1-204ENST00000370496 SS18L1O75177 396 aaPredicted RBP13.26□□□□□ -0.29
COL9A1-204ENST00000370496 SMNDC1O75940 238 aaKnown RBP eCLIP13.26□□□□□ -0.29
COL9A1-204ENST00000370496 IFNW1P05000 195 aa13.26□□□□□ -0.29
COL9A1-204ENST00000370496 GPIP06744 558 aa13.26□□□□□ -0.29
COL9A1-204ENST00000370496 PTNP21246 168 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms